Conservation of cofitness between EX31_RS15065 and EX31_RS15070 in Rahnella sp. WP5

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS15065 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 1.0 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase 0.78 1
Serratia liquefaciens MT49 0.79 IAI46_00600 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.83 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Erwinia tracheiphila SCR3 0.77 LU632_RS24240 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.76 LU632_RS24235 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Klebsiella michiganensis M5al 0.76 BWI76_RS01090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.80 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.72 6
Pectobacterium carotovorum WPP14 0.75 HER17_RS01155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.79 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase 0.96 1
Enterobacter asburiae PDN3 0.75 EX28DRAFT_4456 UDP-N-acetylglucosamine 2-epimerase 0.83 EX28DRAFT_4457 nucleotide sugar dehydrogenase 0.90 2
Escherichia coli BL21 0.75 ECD_03664 UDP-N-acetyl glucosamine-2-epimerase 0.81 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 0.95 1
Escherichia fergusonii Becca 0.75 EFB2_04853 UDP-N-acetylglucosamine 2-epimerase 0.81 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_04268 UDP-N-acetylglucosamine 2-epimerase 0.81 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase 0.71 42
Pantoea sp. MT58 0.75 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.78 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase 0.84 2
Escherichia coli Nissle 1917 0.75 ECOLIN_RS21735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase 0.95 2
Escherichia coli BW25113 0.75 b3786 rffE UDP-N-acetyl glucosamine-2-epimerase (NCBI) 0.81 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) 0.76 1
Escherichia coli ECRC98 0.75 JDDGAC_18195 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.99 4
Escherichia coli ECRC99 0.75 KEDOAH_13580 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECOR27 0.75 NOLOHH_06705 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Escherichia coli ECRC100 0.75 OKFHMN_14570 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Escherichia coli ECRC62 0.75 BNILDI_04820 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.91 10
Escherichia coli ECRC102 0.75 NIAGMN_12325 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC101 0.75 MCAODC_05075 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 87
Escherichia coli ECOR38 0.75 HEPCGN_13280 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.81 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.95 2
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.78 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.78 2
Dickeya dadantii 3937 0.73 DDA3937_RS20055 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.70 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS21245 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.70 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Enterobacter sp. TBS_079 0.72 MPMX20_04487 UDP-N-acetylglucosamine 2-epimerase 0.83 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase 0.80 1
Dickeya dianthicola 67-19 0.72 HGI48_RS20200 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.69 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase 0.59 2
Shewanella amazonensis SB2B 0.71 Sama_2261 UDP-N-acetylglucosamine 2-epimerase (RefSeq) 0.16 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_04705 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.63 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase low > 62
Pseudomonas sp. S08-1 0.68 OH686_14385 UDP-N-acetylglucosamine 2-epimerase 0.69 OH686_14390 UDP-N-acetyl-D-mannosamine dehydrogenase 0.99 1
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_3995 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.73 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.91 1
Marinobacter adhaerens HP15 0.67 HP15_2382 UDP-N-acetylglucosamine 2-epimerase 0.61 HP15_2381 UDP-glucose 6-dehydrogenase low > 73
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_2351 UDP-N-acetylglucosamine 2-epimerase 0.64 B158DRAFT_2353 nucleotide sugar dehydrogenase 0.99 1
Pseudomonas sp. RS175 0.66 PFR28_00916 UDP-N-acetylglucosamine 2-epimerase 0.72 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase 0.98 1
Ralstonia solanacearum PSI07 0.66 RPSI07_RS04510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.67 RPSI07_RS04505 UDP-N-acetyl-D-mannosamine dehydrogenase 0.84 1
Ralstonia solanacearum GMI1000 0.66 RS_RS22030 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.66 RS_RS22025 UDP-N-acetyl-D-mannosamine dehydrogenase 0.80 1
Ralstonia solanacearum UW163 0.65 UW163_RS20040 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.67 UW163_RS20035 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS19090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.67 RALBFv3_RS19095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.62 3
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS30820 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.63 QEN71_RS40735 UDP-N-acetyl-D-mannosamine dehydrogenase low > 153
Bacteroides thetaiotaomicron VPI-5482 0.61 BT2944 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) 0.48 BT2945 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) 0.92 1
Parabacteroides merdae CL09T00C40 0.59 HMPREF1078_RS02610 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.47 HMPREF1078_RS16035 UDP-N-acetyl-D-mannosamine dehydrogenase low > 61
Sphingomonas koreensis DSMZ 15582 0.55 Ga0059261_3102 UDP-N-Acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.48 Ga0059261_3101 nucleotide sugar dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_00800 UDP-N-acetylglucosamine 2-epimerase 0.24 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase low > 104
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS21460 UDP-N-acetylglucosamine 2-epimerase 0.66 BPHYT_RS29845 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Acinetobacter radioresistens SK82 0.41 MPMX26_00920 UDP-N-acetylglucosamine 2-epimerase 0.20 MPMX26_00050 UDP-N-acetyl-D-glucosamine 6-dehydrogenase low > 36
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS01495 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.19 ABZR86_RS16180 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 74
Methanococcus maripaludis JJ 0.28 MMJJ_RS01360 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.37 MMJJ_RS01355 UDP-N-acetyl-D-mannosamine dehydrogenase low > 28
Methanococcus maripaludis S2 0.27 MMP_RS03690 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.37 MMP_RS03695 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_1489 UDP-N-acetylglucosamine 2-epimerase 0.20 Echvi_4400 nucleotide sugar dehydrogenase low > 79
Variovorax sp. OAS795 0.22 ABID97_RS02160 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.17 ABID97_RS02195 nucleotide sugar dehydrogenase 0.99 1
Magnetospirillum magneticum AMB-1 0.21 AMB_RS00515 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.21 AMB_RS00730 nucleotide sugar dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS19270 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.21 CA265_RS19305 Vi polysaccharide biosynthesis protein VipA/TviB 0.90 4
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS13765 UDP-N-acetylglucosamine 2-epimerase 0.20 HSERO_RS20970 NDP-N-acetyl-D-mannosaminuronate dehydrogenase low > 78
Rhodanobacter denitrificans MT42 0.18 LRK55_RS12980 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.21 LRK55_RS11695 nucleotide sugar dehydrogenase low > 63
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS12760 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase 0.19 ABZR88_RS08975 nucleotide sugar dehydrogenase low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.07 CA264_12445 UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) 0.22 CA264_17900 UDP-N-acetyl-D-galactosamine dehydrogenase — —

Not shown: 17 genomes with orthologs for EX31_RS15065 only; 14 genomes with orthologs for EX31_RS15070 only