Conservation of cofitness between EX31_RS21460 and EX31_RS06065 in Rahnella sp. WP5

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21460 LysR family transcriptional regulator ArgP 1.0 EX31_RS06065 phosphate ABC transporter permease PstC 0.79 14
Serratia liquefaciens MT49 0.93 IAI46_20910 LysR family transcriptional regulator ArgP 0.88 IAI46_25180 phosphate ABC transporter permease PstC low > 86
Pantoea sp. MT58 0.92 IAI47_03715 LysR family transcriptional regulator ArgP 0.88 IAI47_00230 phosphate ABC transporter permease PstC low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02715 LysR family transcriptional regulator ArgP 0.84 HER17_RS21680 phosphate ABC transporter permease PstC low > 75
Dickeya dadantii 3937 0.91 DDA3937_RS18490 LysR family transcriptional regulator ArgP 0.79 DDA3937_RS21465 phosphate ABC transporter permease PstC low > 74
Enterobacter sp. TBS_079 0.91 MPMX20_03773 HTH-type transcriptional regulator ArgP 0.82 MPMX20_04640 Phosphate transport system permease protein PstC low > 85
Erwinia tracheiphila SCR3 0.91 LU632_RS05845 LysR family transcriptional regulator ArgP 0.84 LU632_RS24885 pstC phosphate ABC transporter permease PstC low > 74
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2967 transcriptional regulator, ArgP family 0.82 EX28DRAFT_4003 phosphate ABC transporter, permease protein PstC low > 76
Dickeya dianthicola 67-19 0.91 HGI48_RS18415 LysR family transcriptional regulator ArgP 0.79 HGI48_RS21565 phosphate ABC transporter permease PstC low > 71
Dickeya dianthicola ME23 0.91 DZA65_RS19550 LysR family transcriptional regulator ArgP 0.79 DZA65_RS22545 phosphate ABC transporter permease PstC low > 75
Klebsiella michiganensis M5al 0.91 BWI76_RS23930 transcriptional regulator ArgP 0.87 BWI76_RS00155 phosphate transporter permease subunit PstC
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3015 Chromosome initiation inhibitor 0.87 GFF1735 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) low > 78
Escherichia coli ECRC62 0.90 BNILDI_09890 argP DNA-binding transcriptional regulator ArgP 0.87 BNILDI_04510 pstC phosphate ABC transporter permease PstC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.90 OHPLBJKB_00800 HTH-type transcriptional regulator ArgP 0.87 OHPLBJKB_04326 Phosphate transport system permease protein PstC low > 73
Escherichia coli ECRC102 0.90 NIAGMN_17215 argP DNA-binding transcriptional regulator ArgP 0.87 NIAGMN_12640 pstC phosphate ABC transporter permease PstC
Escherichia coli ECRC101 0.90 MCAODC_09970 argP DNA-binding transcriptional regulator ArgP 0.87 MCAODC_05390 pstC phosphate ABC transporter permease PstC low > 87
Escherichia coli BL21 0.90 ECD_02747 transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor 0.87 ECD_03611 phosphate ABC transporter permease low > 61
Escherichia coli Nissle 1917 0.90 ECOLIN_RS16225 DNA-binding transcriptional regulator ArgP 0.87 ECOLIN_RS21445 phosphate ABC transporter permease PstC
Escherichia coli ECRC100 0.90 OKFHMN_19450 argP DNA-binding transcriptional regulator ArgP 0.87 OKFHMN_14885 pstC phosphate ABC transporter permease PstC low > 80
Escherichia fergusonii Becca 0.90 EFB2_00987 HTH-type transcriptional regulator ArgP 0.87 EFB2_04906 Phosphate transport system permease protein PstC low > 86
Escherichia coli BW25113 0.90 b2916 argP chromosome replication initiation inhibitor protein (NCBI) 0.87 b3727 pstC phosphate transporter subunit (NCBI) low > 76
Escherichia coli ECRC99 0.90 KEDOAH_08690 argP DNA-binding transcriptional regulator ArgP 0.87 KEDOAH_13265 pstC phosphate ABC transporter permease PstC
Escherichia coli ECOR27 0.90 NOLOHH_11355 argP DNA-binding transcriptional regulator ArgP 0.87 NOLOHH_07015 pstC phosphate ABC transporter permease PstC low > 75
Escherichia coli ECRC98 0.90 JDDGAC_23090 argP DNA-binding transcriptional regulator ArgP 0.87 JDDGAC_18505 pstC phosphate ABC transporter permease PstC low > 86
Escherichia coli ECOR38 0.90 HEPCGN_18750 argP DNA-binding transcriptional regulator ArgP 0.87 HEPCGN_13595 pstC phosphate ABC transporter permease PstC low > 87
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02560 chromosome initiation inhibitor 0.20 CSW01_14375 phosphate ABC transporter permease subunit PstC low > 62
Shewanella oneidensis MR-1 0.33 SO2866 iciA chromosome initiation inhibitor (NCBI ptt file) 0.23 SO4291 pstC phosphate ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_04995 LysR family transcriptional regulator 0.27 AO356_26695 phosphate ABC transporter permease low > 104
Pseudomonas simiae WCS417 0.30 PS417_22165 LysR family transcriptional regulator 0.27 PS417_14265 phosphate ABC transporter permease low > 88
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU0594 iciA chromosome initiation inhibitor (TIGR) 0.20 DVU2478 pstC-2 phosphate ABC transporter, permease protein, putative (TIGR) low > 55
Pseudomonas fluorescens SBW25 0.29 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.27 PFLU_RS16165 phosphate ABC transporter permease subunit PstC low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS23790 LysR family transcriptional regulator ArgP 0.27 PFLU_RS16165 phosphate ABC transporter permease subunit PstC low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.53 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4057 regulatory protein, LysR:LysR, substrate-binding protein 0.53 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family low > 86
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS10990 LysR family transcriptional regulator ArgP 0.51 ABZR86_RS08235 phosphate ABC transporter permease subunit PstC
Pseudomonas putida KT2440 0.27 PP_0917 Chromosome initiation inhibitor 0.28 PP_2657 phosphate ABC transporter low > 96
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_01770 Transcriptional regulator ArgP 0.51 OKGIIK_06850 pstC phosphate ABC transporter permease subunit PstC
Acidovorax sp. GW101-3H11 0.27 Ac3H11_4846 Transcriptional regulator 0.58 Ac3H11_457 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 0.43 50
Ralstonia solanacearum UW163 0.27 UW163_RS20770 transcriptional regulator ArgP 0.75 UW163_RS15455 phosphate transporter permease subunit PstC
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS18360 transcriptional regulator ArgP 0.75 RALBFv3_RS02145 phosphate transporter permease subunit PstC
Azospirillum sp. SherDot2 0.27 MPMX19_01759 putative HTH-type transcriptional regulator 0.56 MPMX19_06033 Phosphate transport system permease protein PstC low > 112
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS14025 LysR family transcriptional regulator ArgP 0.71 ABZR87_RS14095 phosphate ABC transporter permease PstC low > 80
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.1463.1 Transcriptional regulator lysR family 0.51 Xcc-8004.3361.1 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF1972 Transcriptional regulator 0.58 GFF4231 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) low > 90
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS23610 LysR family transcriptional regulator ArgP 0.79 QEN71_RS04825 phosphate ABC transporter permease PstC 0.33 40
Ralstonia solanacearum PSI07 0.25 RPSI07_RS03900 transcriptional regulator ArgP 0.75 RPSI07_RS15300 phosphate ABC transporter permease subunit PstC low > 81
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS07440 LysR family transcriptional regulator 0.78 BPHYT_RS14140 phosphate transporter permease subunit PstC
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_04882 transcriptional regulator, LysR family 0.79 H281DRAFT_04412 phosphate ABC transporter membrane protein 1, PhoT family
Paraburkholderia graminis OAS925 0.24 ABIE53_001719 LysR family transcriptional regulator (chromosome initiation inhibitor) 0.80 ABIE53_002994 phosphate transport system permease protein low > 113
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS31465 LysR family transcriptional regulator 0.75 RR42_RS13465 phosphate transporter permease subunit PstC low > 128
Mycobacterium tuberculosis H37Rv 0.24 Rv1985c Probable transcriptional regulatory protein (probably LysR-family) 0.30 Rv0935 Phosphate-transport integral membrane ABC transporter PstC1 low > 58
Variovorax sp. OAS795 0.23 ABID97_RS23875 LysR family transcriptional regulator ArgP 0.63 ABID97_RS14600 phosphate ABC transporter permease subunit PstC low > 91
Variovorax sp. SCN45 0.21 GFF2318 Transcriptional regulator ArgP, LysR family 0.65 GFF1093 Phosphate ABC transporter, permease protein PstC (TC 3.A.1.7.1) low > 127

Not shown: 18 genomes with orthologs for EX31_RS21460 only; 15 genomes with orthologs for EX31_RS06065 only