Conservation of cofitness between ECD_00289 and ECD_04254 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00289 propionate--CoA ligase 1.0 ECD_04254 putative DNase low > 61
Escherichia coli ECRC100 1.00 OKFHMN_08885 prpE propionate--CoA ligase 0.93 OKFHMN_11260 yjjV metal-dependent hydrolase low > 80
Escherichia coli ECRC98 1.00 JDDGAC_12540 prpE propionate--CoA ligase 0.93 JDDGAC_14855 yjjV metal-dependent hydrolase low > 86
Escherichia coli ECRC102 1.00 NIAGMN_06940 prpE propionate--CoA ligase 0.93 NIAGMN_09110 yjjV metal-dependent hydrolase — —
Escherichia coli ECRC101 1.00 MCAODC_28115 prpE propionate--CoA ligase 0.93 MCAODC_01775 yjjV metal-dependent hydrolase low > 87
Escherichia coli BW25113 1.00 b0335 prpE predicted propionyl-CoA synthetase with ATPase domain (NCBI) 1.00 b4378 yjjV predicted DNase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03336 Acetyl-coenzyme A synthetase 0.94 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV low > 73
Escherichia coli ECRC99 0.99 KEDOAH_19080 prpE propionate--CoA ligase 0.93 KEDOAH_16885 yjjV metal-dependent hydrolase — —
Escherichia coli ECRC62 0.99 BNILDI_23175 prpE propionate--CoA ligase 0.96 BNILDI_08020 tatD metal-dependent hydrolase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_01760 prpE propionate--CoA ligase 0.94 NOLOHH_03580 yjjV metal-dependent hydrolase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_07470 prpE propionate--CoA ligase 0.96 HEPCGN_09265 tatD metal-dependent hydrolase low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02165 propionate--CoA ligase 0.95 ECOLIN_RS25130 metal-dependent hydrolase low > 55
Escherichia fergusonii Becca 0.99 EFB2_03703 Acetyl-coenzyme A synthetase 0.96 EFB2_04068 putative metal-dependent hydrolase YjjV low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4266 Propionate--CoA ligase (EC 6.2.1.17) 0.73 GFF1040 Putative deoxyribonuclease YjjV low > 78
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS15645 acetyl-CoA synthetase 0.33 HSERO_RS13935 DNAase low > 78
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2208 Propionate--CoA ligase (EC 6.2.1.17) 0.32 Ac3H11_1737 Putative deoxyribonuclease YjjV low > 79
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15240 propionate--CoA ligase 0.32 RPSI07_RS18600 TatD family deoxyribonuclease low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF4880 Propionate--CoA ligase (EC 6.2.1.17) 0.32 GFF744 Putative deoxyribonuclease YjjV low > 90
Ralstonia solanacearum GMI1000 0.64 RS_RS07615 propionate--CoA ligase 0.32 RS_RS05570 TatD family deoxyribonuclease low > 80
Ralstonia solanacearum UW163 0.64 UW163_RS15515 propionate--CoA ligase 0.31 UW163_RS12230 TatD family deoxyribonuclease — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02205 propionate--CoA ligase 0.31 RALBFv3_RS14760 TatD family deoxyribonuclease low > 76
Ralstonia sp. UNC404CL21Col 0.63 ABZR87_RS14155 propionate--CoA ligase 0.31 ABZR87_RS10420 TatD family hydrolase low > 80
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS13560 propionyl-CoA synthetase 0.30 RR42_RS06110 DNAase — —
Variovorax sp. SCN45 0.63 GFF978 Propionate--CoA ligase (EC 6.2.1.17) 0.28 GFF6080 Putative deoxyribonuclease YjjV low > 127
Dechlorosoma suillum PS 0.62 Dsui_2925 propionate--CoA ligase 0.29 Dsui_0503 Mg-dependent DNase low > 51
Variovorax sp. OAS795 0.62 ABID97_RS14140 propionate--CoA ligase 0.31 ABID97_RS22725 TatD family hydrolase low > 91
Castellaniella sp019104865 MT123 0.62 ABCV34_RS00670 propionate--CoA ligase 0.34 ABCV34_RS04985 TatD family hydrolase low > 48
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS05120 propionate--CoA ligase 0.33 QEN71_RS05855 TatD family hydrolase low > 153
Rhodanobacter denitrificans FW104-10B01 0.61 LRK54_RS00715 propionate--CoA ligase 0.35 LRK54_RS16135 TatD family hydrolase low > 59
Paraburkholderia graminis OAS925 0.61 ABIE53_002938 propionyl-CoA synthetase 0.34 ABIE53_002767 TatD DNase family protein low > 113
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS13830 acetyl-CoA synthetase 0.30 BPHYT_RS12705 DNAase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.61 H281DRAFT_04471 propionyl-CoA synthetase 0.33 H281DRAFT_00492 TatD DNase family protein low > 103
Rhodanobacter denitrificans MT42 0.61 LRK55_RS00490 propionate--CoA ligase 0.35 LRK55_RS15885 TatD family hydrolase low > 63
Rhodanobacter sp. FW510-T8 0.60 OKGIIK_06545 prpE propionate--CoA ligase 0.32 OKGIIK_08515 DNAase low > 52
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS08500 propionate--CoA ligase 0.34 ABZR86_RS06375 TatD family hydrolase low > 74
Lysobacter sp. OAE881 0.59 ABIE51_RS06010 propionate--CoA ligase 0.37 ABIE51_RS12580 TatD family hydrolase low > 62
Shewanella sp. ANA-3 0.40 Shewana3_1675 AMP-dependent synthetase and ligase (RefSeq) 0.34 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.40 MIT1002_01463 Acetyl-coenzyme A synthetase 0.32 MIT1002_02710 putative deoxyribonuclease YjjV low > 70
Shewanella loihica PV-4 0.40 Shew_2568 AMP-dependent synthetase and ligase (RefSeq) 0.27 Shew_2818 TatD-related deoxyribonuclease (RefSeq) low > 60
Marinobacter adhaerens HP15 0.40 HP15_2053 PrpE protein 0.38 HP15_542 TatD-related deoxyribonuclease low > 73
Pseudomonas putida KT2440 0.40 PP_2351 propionyl-CoA synthetase 0.32 PP_0791 putative hydrolase low > 96
Shewanella amazonensis SB2B 0.39 Sama_1364 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) 0.25 Sama_0970 TatD-related deoxyribonuclease (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_06755 acetate--CoA ligase 0.45 CSW01_11925 TatD family deoxyribonuclease low > 62

Not shown: 10 genomes with orthologs for ECD_00289 only; 33 genomes with orthologs for ECD_04254 only