Conservation of cofitness between ECD_03886 and ECD_02835 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03886 malate synthase A 1.0 ECD_02835 putative type II secretion protein GspG 0.56 39
Escherichia coli ECRC98 0.99 JDDGAC_16895 aceB malate synthase A 0.61 JDDGAC_30310 gspG type II secretion system major pseudopilin GspG low > 86
Escherichia coli ECRC102 0.99 NIAGMN_11020 aceB malate synthase A 0.61 NIAGMN_28590 gspG type II secretion system major pseudopilin GspG — —
Escherichia coli ECRC100 0.99 OKFHMN_13270 aceB malate synthase A 0.61 OKFHMN_00270 gspG type II secretion system major pseudopilin GspG low > 80
Escherichia coli ECRC101 0.99 MCAODC_03770 aceB malate synthase A 0.61 MCAODC_15280 gspG type II secretion system major pseudopilin GspG low > 87
Escherichia coli ECOR27 0.99 NOLOHH_05415 aceB malate synthase A 1.00 NOLOHH_10990 gspG general secretion pathway protein G low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04036 Malate synthase A 1.00 OHPLBJKB_00742 Type II secretion system protein G low > 73
Escherichia coli ECOR38 0.99 HEPCGN_11910 aceB malate synthase A 1.00 HEPCGN_18065 gspG general secretion pathway protein G low > 87
Escherichia fergusonii Becca 0.99 EFB2_04596 Malate synthase A 1.00 EFB2_00848 Type II secretion system protein G 0.37 21
Escherichia coli Nissle 1917 0.98 ECOLIN_RS25510 malate synthase A 1.00 ECOLIN_RS17070 type II secretion system major pseudopilin GspG — —
Klebsiella michiganensis M5al 0.92 BWI76_RS01660 malate synthase A 0.63 BWI76_RS05075 type II secretion system protein GspG low > 92
Pectobacterium carotovorum WPP14 0.82 HER17_RS02290 malate synthase A 0.64 HER17_RS06700 type II secretion system major pseudopilin GspG low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS19060 malate synthase A 0.62 DDA3937_RS14785 type II secretion system major pseudopilin GspG low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS19150 malate synthase A 0.62 HGI48_RS14720 type II secretion system major pseudopilin GspG low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS20270 malate synthase A 0.62 DZA65_RS15665 type II secretion system major pseudopilin GspG low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03825 malate synthase A 0.78 CSW01_13775 type II secretion system protein GspG — —
Shewanella sp. ANA-3 0.68 Shewana3_2943 malate synthase (RefSeq) 0.66 Shewana3_0154 general secretion pathway protein G (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_2381 malate synthase (RefSeq) 0.63 Sama_0172 general secretion pathway protein G (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO1483 aceB Malate synthase (EC 2.3.3.9) (from data) 0.66 SO0169 gspG general secretion pathway protein G (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_1275 malate synthase (RefSeq) 0.67 Shew_3616 general secretion pathway protein G (RefSeq) — —
Caulobacter crescentus NA1000 0.50 CCNA_01843 malate synthase 0.58 CCNA_00175 type II secretion pathway protein G low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01843 malate synthase 0.58 CCNA_00175 type II secretion pathway protein G low > 67
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.310.1 Malate synthase (EC 2.3.3.9) 0.53 Xcc-8004.945.1 General secretion pathway protein G low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13315 aceB malate synthase A 0.30 OKGIIK_16225 gspG type II secretion system major pseudopilin GspG low > 52
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS10590 malate synthase A 0.29 LRK54_RS09970 type II secretion system major pseudopilin GspG low > 59
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS13485 malate synthase A 0.26 ABZR86_RS13105 type II secretion system major pseudopilin GspG low > 74
Rhodanobacter denitrificans MT42 0.46 LRK55_RS10230 malate synthase A 0.29 LRK55_RS09610 type II secretion system major pseudopilin GspG low > 63
Lysobacter sp. OAE881 0.46 ABIE51_RS00195 malate synthase A 0.28 ABIE51_RS13610 type II secretion system major pseudopilin GspG low > 62
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS15200 malate synthase 0.32 HSERO_RS00940 general secretion pathway protein — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) 0.52 BPHYT_RS19615 general secretion pathway protein G — —
Paraburkholderia graminis OAS925 0.45 ABIE53_002540 malate synthase 0.53 ABIE53_000300 general secretion pathway protein G low > 113
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00576 malate synthase 0.53 H281DRAFT_02352 general secretion pathway protein G low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS17310 malate synthase A 0.54 RPSI07_RS09560 type II secretion system protein GspG low > 81
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS00170 malate synthase A 0.54 RALBFv3_RS07700 type II secretion system protein GspG low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS13500 malate synthase A 0.54 UW163_RS05925 type II secretion system protein GspG — —
Ralstonia solanacearum GMI1000 0.44 RS_RS06835 malate synthase A 0.53 RS_RS15600 type II secretion system protein GspG low > 80
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS06250 malate synthase A 0.52 QEN71_RS29530 type II secretion system protein GspG low > 153
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS11625 malate synthase A 0.54 ABZR87_RS03410 type II secretion system major pseudopilin GspG low > 80
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS12175 malate synthase 0.53 RR42_RS19480 secretion system protein G low > 128

Not shown: 14 genomes with orthologs for ECD_03886 only; 22 genomes with orthologs for ECD_02835 only