Conservation of cofitness between ECD_03274 and ECD_02506 in Escherichia coli BL21

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03274 DNA-binding transcriptional repressor 1.0 ECD_02506 UPF0125 family protein 0.68 1
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00281 Glycerol-3-phosphate regulon repressor 1.00 OHPLBJKB_01089 hypothetical protein low > 73
Escherichia coli ECOR38 0.99 HEPCGN_15760 glpR DeoR/GlpR family transcriptional regulator 0.98 HEPCGN_20255 rnfH RnfH family protein low > 87
Escherichia coli ECOR27 0.99 NOLOHH_08735 glpR DeoR/GlpR family transcriptional regulator 0.99 NOLOHH_12805 rnfH RnfH family protein low > 75
Escherichia coli ECRC62 0.99 BNILDI_02780 glpR DeoR/GlpR family transcriptional regulator 0.99 BNILDI_11610 rnfH RnfH family protein low > 75
Escherichia coli BW25113 0.99 b3423 glpR DNA-binding transcriptional repressor (NCBI) 1.00 b2618 b2618 orf, hypothetical protein (VIMSS) 0.29 24
Escherichia coli ECRC100 0.99 OKFHMN_16940 glpR DeoR/GlpR family transcriptional regulator 0.97 OKFHMN_21135 rnfH RnfH family protein low > 80
Escherichia coli ECRC101 0.99 MCAODC_07470 glpR DeoR/GlpR family transcriptional regulator 0.97 MCAODC_11660 rnfH RnfH family protein low > 87
Escherichia coli ECRC102 0.99 NIAGMN_14710 glpR DeoR/GlpR family transcriptional regulator 0.97 NIAGMN_18905 rnfH RnfH family protein
Escherichia coli ECRC99 0.99 KEDOAH_11200 glpR DeoR/GlpR family transcriptional regulator 0.97 KEDOAH_07085 rnfH RnfH family protein
Escherichia coli ECRC98 0.99 JDDGAC_20570 glpR DeoR/GlpR family transcriptional regulator 0.97 JDDGAC_24800 rnfH RnfH family protein low > 86
Escherichia fergusonii Becca 0.98 EFB2_00406 Glycerol-3-phosphate regulon repressor 0.98 EFB2_01275 Persistence and stress-resistance antitoxin PasI 0.46 15
Escherichia coli Nissle 1917 0.98 ECOLIN_RS19540 DeoR/GlpR family transcriptional regulator 0.98 ECOLIN_RS14785 RnfH family protein
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF590 Glycerol-3-phosphate regulon repressor, DeoR family 0.84 GFF4160 UPF0125 protein yfjF low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_4123 transcriptional regulator, DeoR family 0.82 EX28DRAFT_2721 Uncharacterized protein conserved in bacteria 0.71 34
Klebsiella michiganensis M5al 0.90 BWI76_RS26175 DeoR/GlpR family transcriptional regulator 0.82 BWI76_RS21570 RnfH family protein low > 92
Enterobacter sp. TBS_079 0.90 MPMX20_04306 Glycerol-3-phosphate regulon repressor 0.82 MPMX20_03488 Persistence and stress-resistance antitoxin PasI low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS19670 DeoR/GlpR family transcriptional regulator 0.74 DDA3937_RS04315 RnfH family protein low > 74
Dickeya dianthicola ME23 0.81 DZA65_RS20890 DeoR/GlpR family transcriptional regulator 0.72 DZA65_RS04225 RnfH family protein
Pectobacterium carotovorum WPP14 0.81 HER17_RS01530 DeoR/GlpR family transcriptional regulator 0.73 HER17_RS17430 RnfH family protein low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS19800 DeoR/GlpR family transcriptional regulator 0.72 HGI48_RS04310 RnfH family protein
Pantoea sp. MT58 0.80 IAI47_01765 DeoR/GlpR family transcriptional regulator 0.68 IAI47_04800 RnfH family protein low > 76
Serratia liquefaciens MT49 0.79 IAI46_23910 DeoR/GlpR family transcriptional regulator 0.74 IAI46_19645 RnfH family protein low > 86
Rahnella sp. WP5 0.79 EX31_RS04995 DeoR/GlpR family transcriptional regulator 0.72 EX31_RS21750 RnfH family protein low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS23005 DeoR/GlpR family transcriptional regulator 0.70 LU632_RS17015 RnfH family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_18830 DeoR/GlpR family transcriptional regulator 0.57 CSW01_04385 RnfH family protein
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_18245 DeoR family transcriptional regulator 0.34 AO356_07525 protein RnfH
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3906 regulatory protein, DeoR 0.28 Psyr_4200 Protein of unknown function UPF0125 low > 86
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5573 Glycerol-3-phosphate regulon repressor, DeoR family 0.34 Pf6N2E2_3374 UPF0125 protein yfjF
Pseudomonas sp. RS175 0.57 PFR28_03369 Glycerol-3-phosphate regulon repressor 0.32 PFR28_00068 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3906 regulatory protein, DeoR 0.28 Psyr_4200 Protein of unknown function UPF0125 low > 86
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_04185 DeoR family transcriptional regulator 0.31 AO353_05675 protein RnfH 0.34 28
Pseudomonas simiae WCS417 0.56 PS417_05570 DeoR faimly transcriptional regulator 0.33 PS417_24085 protein RnfH low > 88
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_768 Glycerol-3-phosphate regulon repressor, DeoR family 0.41 Pf1N1B4_1181 UPF0125 protein yfjF
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1733 Glycerol-3-phosphate regulon repressor, DeoR family 0.33 PfGW456L13_5109 UPF0125 protein yfjF 0.26 62
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.32 PFLU_RS25925 RnfH family protein low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS05655 DeoR/GlpR family transcriptional regulator 0.32 PFLU_RS25925 RnfH family protein low > 109
Pseudomonas sp. S08-1 0.54 OH686_20365 Glycerol-3-phosphate regulon repressor GlpR 0.31 OH686_17035 UPF0125 protein RatB low > 80
Pseudomonas stutzeri RCH2 0.54 Psest_2774 Transcriptional regulators of sugar metabolism 0.40 Psest_0959 Uncharacterized protein conserved in bacteria
Marinobacter adhaerens HP15 0.52 HP15_2167 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein 0.34 HP15_3087 protein belonging to uncharacterized protein family UPF0125 low > 73
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.472.1 Glycerol-3-phosphate regulon repressor, DeoR family 0.29 Xcc-8004.3435.1 UPF0125 protein yfjF
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS02250 DeoR/GlpR family DNA-binding transcription regulator 0.47 QEN71_RS06530 RnfH family protein
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS16470 DeoR faimly transcriptional regulator 0.40 BPHYT_RS12030 protein RnfH
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04225 transcriptional regulator, DeoR family 0.42 H281DRAFT_00632 hypothetical protein
Paraburkholderia graminis OAS925 0.45 ABIE53_003465 DeoR family glycerol-3-phosphate regulon repressor 0.45 ABIE53_002480 putative ubiquitin-RnfH superfamily antitoxin RatB of RatAB toxin-antitoxin module low > 113
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS04835 DeoR faimly transcriptional regulator 0.42 HSERO_RS11010 RnfH
Rhodanobacter denitrificans MT42 0.25 LRK55_RS01610 DeoR/GlpR family DNA-binding transcription regulator 0.32 LRK55_RS17790 RnfH family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS01820 DeoR/GlpR family DNA-binding transcription regulator 0.32 LRK54_RS17935 RnfH family protein low > 59

Not shown: 20 genomes with orthologs for ECD_03274 only; 12 genomes with orthologs for ECD_02506 only