Conservation of cofitness between ECD_02445 and ECD_02242 in Escherichia coli BL21

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02445 regulatory protein P-II for glutamine synthetase 1.0 ECD_02242 DedA family inner membrane protein 0.54 13
Escherichia coli ECRC62 1.00 BNILDI_11975 glnB nitrogen regulatory protein P-II 0.92 BNILDI_13230 DedA family inner membrane protein low > 75
Escherichia coli ECRC100 1.00 OKFHMN_21500 glnB nitrogen regulatory protein P-II 1.00 OKFHMN_22675 Protein DedA low > 80
Escherichia coli ECOR38 1.00 HEPCGN_20645 glnB nitrogen regulatory protein P-II 0.92 HEPCGN_21880 DedA family inner membrane protein low > 87
Escherichia fergusonii Becca 1.00 EFB2_01343 Nitrogen regulatory protein P-II 1 0.93 EFB2_01541 Protein DedA low > 86
Escherichia coli ECRC101 1.00 MCAODC_12030 glnB nitrogen regulatory protein P-II 1.00 MCAODC_13715 Protein DedA low > 87
Escherichia coli ECRC99 1.00 KEDOAH_06720 glnB nitrogen regulatory protein P-II 1.00 KEDOAH_05520 Protein DedA — —
Escherichia coli BW25113 1.00 b2553 glnB regulatory protein P-II for glutamine synthetase (NCBI) 1.00 b2317 dedA conserved inner membrane protein (NCBI) 0.37 7
Escherichia coli ECOR27 1.00 NOLOHH_13175 glnB nitrogen regulatory protein P-II 1.00 NOLOHH_14310 Protein DedA low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14450 nitrogen regulatory protein P-II 0.93 ECOLIN_RS13430 DedA family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01154 Nitrogen regulatory protein P-II 1 1.00 OHPLBJKB_01388 Protein DedA low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.00 GFF2454 Nitrogen regulatory protein P-II 0.98 GFF1933 DedA protein low > 78
Escherichia coli ECRC102 1.00 NIAGMN_19270 glnB nitrogen regulatory protein P-II 1.00 NIAGMN_20450 Protein DedA — —
Escherichia coli ECRC98 1.00 JDDGAC_25165 glnB nitrogen regulatory protein P-II 1.00 JDDGAC_26635 Protein DedA low > 86
Enterobacter sp. TBS_079 0.99 MPMX20_03422 Nitrogen regulatory protein P-II 0.91 MPMX20_03252 Protein DedA low > 85
Enterobacter asburiae PDN3 0.99 EX28DRAFT_0097 nitrogen regulatory protein P-II family 0.91 EX28DRAFT_0287 Uncharacterized membrane-associated protein low > 76
Klebsiella michiganensis M5al 0.99 BWI76_RS21245 nitrogen regulatory protein P-II 0.92 BWI76_RS20375 membrane protein low > 92
Dickeya dadantii 3937 0.97 DDA3937_RS15635 nitrogen regulatory protein P-II 0.85 DDA3937_RS14460 DedA family protein low > 74
Dickeya dianthicola ME23 0.96 DZA65_RS16810 nitrogen regulatory protein P-II 0.83 DZA65_RS15365 DedA family protein low > 75
Erwinia tracheiphila SCR3 0.96 LU632_RS17925 glnB nitrogen regulatory protein P-II 0.80 LU632_RS07830 DedA family protein low > 74
Dickeya dianthicola 67-19 0.96 HGI48_RS15730 nitrogen regulatory protein P-II 0.83 HGI48_RS14430 DedA family protein low > 71
Serratia liquefaciens MT49 0.95 IAI46_19450 nitrogen regulatory protein P-II 0.90 IAI46_17835 DedA family protein low > 86
Pantoea sp. MT58 0.95 IAI47_04950 nitrogen regulatory protein P-II 0.82 IAI47_06250 DedA family protein low > 76
Rahnella sp. WP5 0.94 EX31_RS20610 nitrogen regulatory protein P-II 0.88 EX31_RS19595 DedA family protein low > 89
Hydrogenophaga sp. GW460-11-11-14-LB1 0.82 GFF4272 Nitrogen regulatory protein P-II 0.55 GFF5484 DedA protein — —
Paraburkholderia bryophila 376MFSha3.1 0.82 H281DRAFT_00219 nitrogen regulatory protein P-II family 0.46 H281DRAFT_04713 membrane-associated protein low > 103
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS05485 nitrogen regulatory protein P-II 1 0.46 BPHYT_RS03655 membrane protein low > 109
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS24890 P-II family nitrogen regulator 0.43 QEN71_RS26430 DedA family protein low > 153
Paraburkholderia graminis OAS925 0.82 ABIE53_001346 nitrogen regulatory protein P-II 1 0.46 ABIE53_000878 membrane-associated protein low > 113
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04300 nitrogen regulatory protein P-II 1 0.46 RR42_RS17200 membrane protein — —
Dechlorosoma suillum PS 0.81 Dsui_1687 nitrogen regulatory protein PII 0.48 Dsui_1547 putative membrane-associated protein — —
Variovorax sp. OAS795 0.80 ABID97_RS14850 P-II family nitrogen regulator 0.51 ABID97_RS20305 DedA family protein — —
Ralstonia solanacearum GMI1000 0.80 RS_RS11770 nitrogen regulatory protein P-II 1 0.46 RS_RS12830 membrane protein low > 80
Ralstonia solanacearum PSI07 0.80 RPSI07_RS13170 nitrogen regulatory protein P-II 1 0.47 RPSI07_RS12090 membrane protein — —
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS16080 P-II family nitrogen regulator 0.45 ABZR87_RS00865 VTT domain-containing protein low > 80
Variovorax sp. SCN45 0.80 GFF1151 Nitrogen regulatory protein P-II 0.50 GFF4801 DedA protein low > 127
Ralstonia solanacearum UW163 0.79 UW163_RS09490 nitrogen regulatory protein P-II 1 0.47 UW163_RS08415 membrane protein — —
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS04180 nitrogen regulatory protein P-II 1 0.47 RALBFv3_RS05210 membrane protein low > 76
Castellaniella sp019104865 MT123 0.72 ABCV34_RS03065 P-II family nitrogen regulator 0.43 ABCV34_RS08780 VTT domain-containing protein 0.45 4
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS09460 nitrogen regulatory protein P-II 1 0.63 HSERO_RS17220 membrane protein — —
Mycobacterium tuberculosis H37Rv 0.67 Rv2919c Probable nitrogen regulatory protein P-II GlnB 0.35 Rv0364 Possible conserved transmembrane protein — —
Desulfovibrio vulgaris Hildenborough JW710 0.66 DVU1232 glnB-1 nitrogen regulatory protein P-II (TIGR) 0.50 DVU2682 DedA family protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.66 DvMF_0865 nitrogen regulatory protein P-II (RefSeq) 0.51 DvMF_1142 SNARE associated Golgi protein (RefSeq) low > 51
Bifidobacterium breve UCC2003 0.61 BBR_RS11520 P-II family nitrogen regulator 0.34 BBR_RS10940 DedA family protein low > 34
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS14280 P-II family nitrogen regulator 0.65 ABI39_RS13800 DedA family protein low > 72
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03765 nitrogen regulatory protein P-II 0.67 BACOVA_05451 SNARE-like domain protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.39 BT0545 nitrogen regulatory protein P-II (NCBI ptt file) 0.62 BT4639 conserved hypothetical protein, putative membrane protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS06900 P-II family nitrogen regulator 0.65 HMPREF1058_RS17605 DedA family protein low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_21345 transcriptional regulator 0.49 CA264_09550 hypothetical protein low > 74

Not shown: 30 genomes with orthologs for ECD_02445 only; 18 genomes with orthologs for ECD_02242 only