Conservation of cofitness between ECD_02848 and ECD_01824 in Escherichia coli BL21

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02848 glycolate oxidase subunit, FAD-linked 1.0 ECD_01824 putative DNA-binding transcriptional regulator 0.50 4
Escherichia coli ECRC62 1.00 BNILDI_00595 glcD glycolate oxidase subunit GlcD 1.00 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR low > 75
Escherichia coli BW25113 1.00 b2979 glcD glycolate dehydrogenase, putative FAD-linked subunit (from data) 1.00 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_00835 putative FAD-linked oxidoreductase 0.99 EFB2_02089 HTH-type transcriptional regulator HexR low > 86
Escherichia coli ECOR27 1.00 NOLOHH_10920 glcD glycolate oxidase subunit GlcD 1.00 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00727 putative FAD-linked oxidoreductase 1.00 OHPLBJKB_01875 HTH-type transcriptional regulator HexR low > 73
Escherichia coli ECOR38 0.99 HEPCGN_17995 glcD glycolate oxidase subunit GlcD 1.00 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17140 glycolate oxidase subunit GlcD 0.99 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR low > 55
Pseudomonas stutzeri RCH2 0.84 Psest_3841 D-lactate/glycolate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6; EC 1.1.99.14) (from data) 0.54 Psest_0851 Transcriptional regulators low > 67
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_5862 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.56 Pf1N1B4_590 Phosphogluconate repressor HexR, RpiR family low > 87
Pseudomonas putida KT2440 0.82 PP_3745 glycolate oxidase, putative FAD-linked subunit 0.55 PP_1021 DNA-binding transcriptional regulator low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.55 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) low > 86
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_3331 Glycolate oxidase subunit GlcD 0.55 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) low > 86
Pseudomonas sp. RS175 0.81 PFR28_02758 putative FAD-linked oxidoreductase 0.55 PFR28_00572 HTH-type transcriptional regulator HexR low > 88
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_01090 glycolate oxidase subunit GlcD 0.56 AO356_05165 transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_21310 glycolate oxidase subunit GlcD 0.55 AO353_03365 transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_137 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.56 Pf6N2E2_2886 Phosphogluconate repressor HexR, RpiR family low > 103
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS38015 glycolate oxidase subunit GlcD 0.33 QEN71_RS26925 MurR/RpiR family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS31645 FAD-binding protein 0.35 BPHYT_RS16740 transcriptional regulator low > 109
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS19105 FAD-binding protein 0.36 HSERO_RS05505 transcriptional regulator low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF2733 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.34 GFF1364 Phosphogluconate repressor HexR, RpiR family low > 90
Ralstonia solanacearum UW163 0.60 UW163_RS08135 FAD-binding oxidoreductase 0.22 UW163_RS17145 MurR/RpiR family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05490 FAD-binding oxidoreductase 0.22 RALBFv3_RS16405 MurR/RpiR family transcriptional regulator low > 76
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS17300 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.34 RR42_RS06120 transcriptional regulator low > 128
Marinobacter adhaerens HP15 0.59 HP15_3024 FAD linked oxidase domain protein 0.55 HP15_2180 transcriptional regulator, RpiR family protein low > 73
Paraburkholderia graminis OAS925 0.59 ABIE53_000844 glycolate oxidase 0.35 ABIE53_003518 RpiR family carbohydrate utilization transcriptional regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04683 glycolate oxidase 0.35 H281DRAFT_04279 transcriptional regulator, RpiR family low > 103
Ralstonia solanacearum PSI07 0.59 RPSI07_RS11810 FAD-binding oxidoreductase 0.22 RPSI07_RS07300 MurR/RpiR family transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.59 RS_RS13350 FAD-binding oxidoreductase 0.23 RS_RS24600 MurR/RpiR family transcriptional regulator 0.25 64
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01135 FAD-linked oxidase C-terminal domain-containing protein 0.23 ABZR87_RS03145 MurR/RpiR family transcriptional regulator low > 80
Castellaniella sp019104865 MT123 0.58 ABCV34_RS06815 FAD-linked oxidase C-terminal domain-containing protein 0.40 ABCV34_RS08655 SIS domain-containing protein low > 48
Acidovorax sp. GW101-3H11 0.58 Ac3H11_4483 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.35 Ac3H11_2055 Probable transcriptional regulator low > 79
Variovorax sp. OAS795 0.58 ABID97_RS03650 FAD-linked oxidase C-terminal domain-containing protein 0.24 ABID97_RS22860 MurR/RpiR family transcriptional regulator low > 91
Variovorax sp. SCN45 0.57 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 0.23 GFF6715 Transcriptional regulator of RpiR family in catabolic operon low > 127
Azospirillum sp. SherDot2 0.55 MPMX19_00301 putative FAD-linked oxidoreductase 0.34 MPMX19_04844 HTH-type transcriptional regulator HexR low > 112
Azospirillum brasilense Sp245 0.54 AZOBR_RS05725 FAD-binding protein 0.38 AZOBR_RS30190 transcriptional regulator low > 97
Agrobacterium fabrum C58 0.43 Atu0665 glycolate oxidase subunit 0.22 Atu2598 transcriptional regulator, RpiR family low > 89
Rhizobium sp. OAE497 0.43 ABIE40_RS03555 FAD-linked oxidase C-terminal domain-containing protein 0.27 ABIE40_RS21410 MurR/RpiR family transcriptional regulator low > 107
Sinorhizobium meliloti 1021 0.41 SMc00832 D-lactate dehydrogenase, FAD-linked subunit GlcD (EC 1.1.99.6) (from data) 0.36 SMc02460 hypothetical protein 0.22 74
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS15570 FAD-binding protein 0.54 PFLU_RS23730 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.20 PFLU_RS15570 FAD-binding protein 0.54 PFLU_RS23730 MurR/RpiR family transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_944 D-2-hydroxyglutarate dehydrogenase 0.55 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family low > 87
Pseudomonas sp. S08-1 0.18 OH686_11285 D-2-hydroxyglutarate dehydrogenase 0.55 OH686_02440 Phosphogluconate repressor HexR, RpiR family low > 80
Pseudomonas simiae WCS417 0.17 PS417_27035 FAD-linked oxidase 0.54 PS417_22115 transcriptional regulator low > 88

Not shown: 27 genomes with orthologs for ECD_02848 only; 23 genomes with orthologs for ECD_01824 only