Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BL21 | 1.0 | ECD_02911 | | 4,5- DOPA-extradiol-dioxygenase | 1.0 | ECD_01760 | | putative MFS transporter, inner membrane protein | 0.37 | 9 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00665 | | 4,5-DOPA dioxygenase extradiol | 1.00 | OHPLBJKB_01942 | | 2-nitroimidazole transporter | low | > 73 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_17665 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.99 | HEPCGN_05065 | nimT | 2-nitroimidazole transporter | low | > 85 |
Escherichia coli ECRC99 | 0.99 | KEDOAH_09355 | ygiD | 4,5-DOPA dioxygenase extradiol | 1.00 | KEDOAH_01435 | nimT | 2-nitroimidazole transporter | — | — |
Escherichia coli ECRC102 | 0.99 | NIAGMN_16555 | ygiD | 4,5-DOPA dioxygenase extradiol | 1.00 | NIAGMN_01390 | nimT | 2-nitroimidazole transporter | — | — |
Escherichia coli ECRC101 | 0.99 | MCAODC_09305 | ygiD | 4,5-DOPA dioxygenase extradiol | 1.00 | MCAODC_18735 | nimT | 2-nitroimidazole transporter | — | — |
Escherichia coli ECRC101 | 0.99 | OKFHMN_18790 | ygiD | 4,5-DOPA dioxygenase extradiol | 1.00 | OKFHMN_26675 | nimT | 2-nitroimidazole transporter | — | — |
Escherichia coli ECRC98 | 0.99 | JDDGAC_22425 | ygiD | 4,5-DOPA dioxygenase extradiol | 0.99 | JDDGAC_01250 | nimT | 2-nitroimidazole transporter | — | — |
Escherichia coli ECRC62 | 0.98 | BNILDI_00920 | ygiD | 4,5-DOPA dioxygenase extradiol | 1.00 | BNILDI_15990 | nimT | 2-nitroimidazole transporter | — | — |
Escherichia coli ECOR27 | 0.98 | NOLOHH_10595 | ygiD | 4,5-DOPA dioxygenase extradiol | 1.00 | NOLOHH_17205 | nimT | 2-nitroimidazole transporter | low | > 57 |
Escherichia fergusonii Becca | 0.97 | EFB2_00767 | | 4,5-DOPA dioxygenase extradiol | 1.00 | EFB2_02204 | | 2-nitroimidazole transporter | low | > 86 |
Escherichia coli BW25113 | 0.97 | b3039 | ygiD | predicted dioxygenase (RefSeq) | 1.00 | b1791 | yeaN | predicted transporter (NCBI) | low | > 76 |
Escherichia coli Nissle 1917 | 0.95 | ECOLIN_RS17550 | | 4,5-DOPA dioxygenase extradiol | 0.99 | ECOLIN_RS09980 | | 2-nitroimidazole transporter | — | — |
Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_3076 | | Uncharacterized conserved protein | 0.74 | EX28DRAFT_1781 | | cyanate transporter | low | > 76 |
Enterobacter sp. TBS_079 | 0.89 | MPMX20_03885 | | 4,5-DOPA dioxygenase extradiol | 0.69 | MPMX20_01834 | | 2-nitroimidazole transporter | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.88 | GFF3152 | | Uncharacterized protein ygiD | 0.74 | GFF3465 | | hypothetical protein | low | > 78 |
Klebsiella michiganensis M5al | 0.87 | BWI76_RS24415 | | dioxygenase | 0.72 | BWI76_RS11450 | | cyanate MFS transporter | low | > 92 |
Rahnella sp. WP5 | 0.75 | EX31_RS08115 | | 4,5-DOPA dioxygenase extradiol | 0.29 | EX31_RS16910 | | MFS transporter | low | > 89 |
Serratia liquefaciens MT49 | 0.75 | IAI46_22030 | | 4,5-DOPA dioxygenase extradiol | 0.34 | IAI46_20590 | | MFS transporter | low | > 86 |
Pantoea sp. MT58 | 0.72 | IAI47_03120 | | 4,5-DOPA dioxygenase extradiol | 0.28 | IAI47_20605 | | MFS transporter | low | > 76 |
Variovorax sp. SCN45 | 0.48 | GFF5260 | | Uncharacterized protein ygiD | 0.27 | GFF5970 | | Uncharacterized MFS-type transporter | low | > 127 |
Variovorax sp. OAS795 | 0.46 | ABID97_RS07060 | | 4,5-DOPA dioxygenase extradiol | 0.28 | ABID97_RS08055 | | MFS transporter | low | > 91 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.44 | Echvi_4002 | | Uncharacterized conserved protein | 0.30 | Echvi_0646 | | Cyanate permease | low | > 79 |
Pseudomonas fluorescens FW300-N2E3 | 0.33 | AO353_19135 | | aromatic ring-opening dioxygenase LigB | 0.28 | AO353_04590 | | MFS transporter | low | > 101 |
Lysobacter sp. OAE881 | 0.33 | ABIE51_RS06095 | | class III extradiol ring-cleavage dioxygenase | 0.17 | ABIE51_RS18570 | | MFS transporter | low | > 62 |
Pseudomonas simiae WCS417 | 0.32 | PS417_08545 | | aromatic ring-opening dioxygenase LigB | 0.27 | PS417_04925 | | MFS transporter | low | > 88 |
Pseudomonas fluorescens FW300-N2C3 | 0.32 | AO356_03105 | | aromatic ring-opening dioxygenase LigB | 0.28 | AO356_17415 | | MFS transporter | low | > 104 |
Pseudomonas fluorescens SBW25-INTG | 0.31 | PFLU_RS08495 | | dioxygenase | 0.28 | PFLU_RS04995 | | CynX/NimT family MFS transporter | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.31 | PFLU_RS08495 | | dioxygenase | 0.28 | PFLU_RS04995 | | CynX/NimT family MFS transporter | low | > 109 |
Castellaniella sp019104865 MT123 | 0.31 | ABCV34_RS05980 | | class III extradiol ring-cleavage dioxygenase | 0.24 | ABCV34_RS03490 | | MFS transporter | low | > 48 |
Pseudomonas putida KT2440 | 0.31 | PP_1869 | | 4,5-DOPA-dioxygenase | 0.29 | PP_0970 | | Cyanate MFS transporter | low | > 96 |
Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_05688 | | Aromatic ring-opening dioxygenase, catalytic subunit, LigB family | 0.23 | H281DRAFT_01563 | | MFS transporter, CP family, cyanate transporter | low | > 103 |
Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_2449 | | FIG074102: hypothetical protein | 0.28 | Pf6N2E2_5409 | | Cyanate transport protein CynX | low | > 103 |
Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS02940 | | hypothetical protein | 0.41 | HSERO_RS21180 | | MFS transporter | low | > 78 |
Pseudomonas sp. RS175 | 0.30 | PFR28_00981 | | 4,5-DOPA dioxygenase extradiol | 0.29 | PFR28_03538 | | putative transporter YycB | low | > 88 |
Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_2248 | | FIG074102: hypothetical protein | 0.27 | PfGW456L13_1703 | | Cyanate transport protein CynX | low | > 87 |
Paraburkholderia sabiae LMG 24235 | 0.30 | QEN71_RS27690 | | class III extradiol ring-cleavage dioxygenase | 0.24 | QEN71_RS20755 | | MFS transporter | low | > 153 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.30 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 0.31 | Psyr_1076 | | Cyanate transport system protein | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.30 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | 0.31 | Psyr_1076 | | Cyanate transport system protein | low | > 86 |
Paraburkholderia graminis OAS925 | 0.30 | ABIE53_003667 | | 4,5-DOPA dioxygenase extradiol | 0.24 | ABIE53_005196 | | CP family cyanate transporter-like MFS transporter | low | > 113 |
Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_264 | | FIG074102: hypothetical protein | 0.29 | Pf1N1B4_910 | | Cyanate transport protein CynX | low | > 87 |
Xanthomonas campestris pv. campestris strain 8004 | 0.28 | Xcc-8004.4645.1 | | FIG074102: hypothetical protein | 0.16 | Xcc-8004.2329.1 | | MFS transporter | low | > 74 |
Azospirillum sp. SherDot2 | 0.28 | MPMX19_00554 | | 4,5-DOPA dioxygenase extradiol | 0.25 | MPMX19_04752 | | putative transporter YycB | 0.46 | 74 |
Ralstonia sp. UNC404CL21Col | 0.27 | ABZR87_RS05290 | | class III extradiol ring-cleavage dioxygenase | 0.27 | ABZR87_RS20935 | | CynX/NimT family MFS transporter | low | > 80 |
Ralstonia solanacearum GMI1000 | 0.24 | RS_RS00070 | | dioxygenase | 0.27 | RS_RS20315 | | MFS transporter | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS09470 | | dioxygenase | 0.25 | RALBFv3_RS20355 | | MFS transporter | low | > 76 |
Ralstonia solanacearum UW163 | 0.24 | UW163_RS04110 | | dioxygenase | 0.25 | UW163_RS18820 | | MFS transporter | — | — |
Ralstonia solanacearum PSI07 | 0.24 | RPSI07_RS23880 | | dioxygenase | 0.26 | RPSI07_RS02495 | | MFS transporter | low | > 81 |
Rhodospirillum rubrum S1H | 0.22 | Rru_A0209 | | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (NCBI) | 0.26 | Rru_A2380 | | Major facilitator superfamily MFS_1 (NCBI) | low | > 58 |
Not shown: 33 genomes with orthologs for ECD_02911 only; 1 genomes with orthologs for ECD_01760 only