Conservation of cofitness between ECD_02911 and ECD_01760 in Escherichia coli BL21

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02911 4,5- DOPA-extradiol-dioxygenase 1.0 ECD_01760 putative MFS transporter, inner membrane protein 0.37 9
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00665 4,5-DOPA dioxygenase extradiol 1.00 OHPLBJKB_01942 2-nitroimidazole transporter low > 73
Escherichia coli ECOR38 1.00 HEPCGN_17665 ygiD 4,5-DOPA dioxygenase extradiol 0.99 HEPCGN_05065 nimT 2-nitroimidazole transporter low > 85
Escherichia coli ECRC99 0.99 KEDOAH_09355 ygiD 4,5-DOPA dioxygenase extradiol 1.00 KEDOAH_01435 nimT 2-nitroimidazole transporter
Escherichia coli ECRC102 0.99 NIAGMN_16555 ygiD 4,5-DOPA dioxygenase extradiol 1.00 NIAGMN_01390 nimT 2-nitroimidazole transporter
Escherichia coli ECRC101 0.99 MCAODC_09305 ygiD 4,5-DOPA dioxygenase extradiol 1.00 MCAODC_18735 nimT 2-nitroimidazole transporter
Escherichia coli ECRC101 0.99 OKFHMN_18790 ygiD 4,5-DOPA dioxygenase extradiol 1.00 OKFHMN_26675 nimT 2-nitroimidazole transporter
Escherichia coli ECRC98 0.99 JDDGAC_22425 ygiD 4,5-DOPA dioxygenase extradiol 0.99 JDDGAC_01250 nimT 2-nitroimidazole transporter
Escherichia coli ECRC62 0.98 BNILDI_00920 ygiD 4,5-DOPA dioxygenase extradiol 1.00 BNILDI_15990 nimT 2-nitroimidazole transporter
Escherichia coli ECOR27 0.98 NOLOHH_10595 ygiD 4,5-DOPA dioxygenase extradiol 1.00 NOLOHH_17205 nimT 2-nitroimidazole transporter low > 57
Escherichia fergusonii Becca 0.97 EFB2_00767 4,5-DOPA dioxygenase extradiol 1.00 EFB2_02204 2-nitroimidazole transporter low > 86
Escherichia coli BW25113 0.97 b3039 ygiD predicted dioxygenase (RefSeq) 1.00 b1791 yeaN predicted transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.95 ECOLIN_RS17550 4,5-DOPA dioxygenase extradiol 0.99 ECOLIN_RS09980 2-nitroimidazole transporter
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3076 Uncharacterized conserved protein 0.74 EX28DRAFT_1781 cyanate transporter low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_03885 4,5-DOPA dioxygenase extradiol 0.69 MPMX20_01834 2-nitroimidazole transporter low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF3152 Uncharacterized protein ygiD 0.74 GFF3465 hypothetical protein low > 78
Klebsiella michiganensis M5al 0.87 BWI76_RS24415 dioxygenase 0.72 BWI76_RS11450 cyanate MFS transporter low > 92
Rahnella sp. WP5 0.75 EX31_RS08115 4,5-DOPA dioxygenase extradiol 0.29 EX31_RS16910 MFS transporter low > 89
Serratia liquefaciens MT49 0.75 IAI46_22030 4,5-DOPA dioxygenase extradiol 0.34 IAI46_20590 MFS transporter low > 86
Pantoea sp. MT58 0.72 IAI47_03120 4,5-DOPA dioxygenase extradiol 0.28 IAI47_20605 MFS transporter low > 76
Variovorax sp. SCN45 0.48 GFF5260 Uncharacterized protein ygiD 0.27 GFF5970 Uncharacterized MFS-type transporter low > 127
Variovorax sp. OAS795 0.46 ABID97_RS07060 4,5-DOPA dioxygenase extradiol 0.28 ABID97_RS08055 MFS transporter low > 91
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_4002 Uncharacterized conserved protein 0.30 Echvi_0646 Cyanate permease low > 79
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_19135 aromatic ring-opening dioxygenase LigB 0.28 AO353_04590 MFS transporter low > 101
Lysobacter sp. OAE881 0.33 ABIE51_RS06095 class III extradiol ring-cleavage dioxygenase 0.17 ABIE51_RS18570 MFS transporter low > 62
Pseudomonas simiae WCS417 0.32 PS417_08545 aromatic ring-opening dioxygenase LigB 0.27 PS417_04925 MFS transporter low > 88
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_03105 aromatic ring-opening dioxygenase LigB 0.28 AO356_17415 MFS transporter low > 104
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS08495 dioxygenase 0.28 PFLU_RS04995 CynX/NimT family MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.31 PFLU_RS08495 dioxygenase 0.28 PFLU_RS04995 CynX/NimT family MFS transporter low > 109
Castellaniella sp019104865 MT123 0.31 ABCV34_RS05980 class III extradiol ring-cleavage dioxygenase 0.24 ABCV34_RS03490 MFS transporter low > 48
Pseudomonas putida KT2440 0.31 PP_1869 4,5-DOPA-dioxygenase 0.29 PP_0970 Cyanate MFS transporter low > 96
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_05688 Aromatic ring-opening dioxygenase, catalytic subunit, LigB family 0.23 H281DRAFT_01563 MFS transporter, CP family, cyanate transporter low > 103
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2449 FIG074102: hypothetical protein 0.28 Pf6N2E2_5409 Cyanate transport protein CynX low > 103
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS02940 hypothetical protein 0.41 HSERO_RS21180 MFS transporter low > 78
Pseudomonas sp. RS175 0.30 PFR28_00981 4,5-DOPA dioxygenase extradiol 0.29 PFR28_03538 putative transporter YycB low > 88
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_2248 FIG074102: hypothetical protein 0.27 PfGW456L13_1703 Cyanate transport protein CynX low > 87
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS27690 class III extradiol ring-cleavage dioxygenase 0.24 QEN71_RS20755 MFS transporter low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_3618 Catalytic LigB subunit of aromatic ring-opening dioxygenase 0.31 Psyr_1076 Cyanate transport system protein low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_3618 Catalytic LigB subunit of aromatic ring-opening dioxygenase 0.31 Psyr_1076 Cyanate transport system protein low > 86
Paraburkholderia graminis OAS925 0.30 ABIE53_003667 4,5-DOPA dioxygenase extradiol 0.24 ABIE53_005196 CP family cyanate transporter-like MFS transporter low > 113
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_264 FIG074102: hypothetical protein 0.29 Pf1N1B4_910 Cyanate transport protein CynX low > 87
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4645.1 FIG074102: hypothetical protein 0.16 Xcc-8004.2329.1 MFS transporter low > 74
Azospirillum sp. SherDot2 0.28 MPMX19_00554 4,5-DOPA dioxygenase extradiol 0.25 MPMX19_04752 putative transporter YycB 0.46 74
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS05290 class III extradiol ring-cleavage dioxygenase 0.27 ABZR87_RS20935 CynX/NimT family MFS transporter low > 80
Ralstonia solanacearum GMI1000 0.24 RS_RS00070 dioxygenase 0.27 RS_RS20315 MFS transporter low > 80
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS09470 dioxygenase 0.25 RALBFv3_RS20355 MFS transporter low > 76
Ralstonia solanacearum UW163 0.24 UW163_RS04110 dioxygenase 0.25 UW163_RS18820 MFS transporter
Ralstonia solanacearum PSI07 0.24 RPSI07_RS23880 dioxygenase 0.26 RPSI07_RS02495 MFS transporter low > 81
Rhodospirillum rubrum S1H 0.22 Rru_A0209 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (NCBI) 0.26 Rru_A2380 Major facilitator superfamily MFS_1 (NCBI) low > 58

Not shown: 33 genomes with orthologs for ECD_02911 only; 1 genomes with orthologs for ECD_01760 only