Conservation of cofitness between DZA65_RS03465 and DZA65_RS06830 in Dickeya dianthicola ME23

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS03465 FAD assembly factor SdhE 1.0 DZA65_RS06830 succinate dehydrogenase membrane anchor subunit 0.56 12
Dickeya dianthicola 67-19 0.99 HGI48_RS03420 FAD assembly factor SdhE 1.00 HGI48_RS06485 succinate dehydrogenase membrane anchor subunit
Dickeya dadantii 3937 0.98 DDA3937_RS03280 FAD assembly factor SdhE 0.99 DDA3937_RS06445 succinate dehydrogenase membrane anchor subunit low > 74
Klebsiella michiganensis M5al 0.87 BWI76_RS23830 hypothetical protein 0.75 BWI76_RS08400 succinate dehydrogenase cytochrome b556 small membrane subunit
Pectobacterium carotovorum WPP14 0.86 HER17_RS17925 FAD assembly factor SdhE 0.94 HER17_RS14945 succinate dehydrogenase membrane anchor subunit
Rahnella sp. WP5 0.85 EX31_RS13495 FAD assembly factor SdhE 0.73 EX31_RS23425 succinate dehydrogenase membrane anchor subunit 0.80 3
Escherichia coli HS(pFamp)R (ATCC 700891) 0.85 OHPLBJKB_00818 FAD assembly factor SdhE 0.70 OHPLBJKB_02994 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.36 3
Escherichia coli ECRC100 0.85 OKFHMN_19555 sdhE FAD assembly factor SdhE 0.68 OKFHMN_06945 sdhD succinate dehydrogenase membrane anchor subunit low > 79
Escherichia fergusonii Becca 0.85 EFB2_01004 FAD assembly factor SdhE 0.70 EFB2_03383 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.26 86
Escherichia coli ECRC62 0.85 BNILDI_10010 sdhE FAD assembly factor SdhE 0.70 BNILDI_21325 sdhD succinate dehydrogenase membrane anchor subunit low > 75
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2948 Uncharacterized conserved protein 0.79 EX28DRAFT_2269 succinate dehydrogenase, hydrophobic membrane anchor protein 0.95 1
Escherichia coli ECRC98 0.85 JDDGAC_23195 sdhE FAD assembly factor SdhE 0.68 JDDGAC_10600 sdhD succinate dehydrogenase membrane anchor subunit low > 87
Escherichia coli ECRC101 0.85 MCAODC_10075 sdhE FAD assembly factor SdhE 0.68 MCAODC_26165 sdhD succinate dehydrogenase membrane anchor subunit 0.20 67
Enterobacter sp. TBS_079 0.85 MPMX20_03756 FAD assembly factor SdhE 0.69 MPMX20_01351 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.71 4
Escherichia coli BW25113 0.85 b2897 ygfY hypothetical protein (NCBI) 0.70 b0722 sdhD succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) 0.54 5
Escherichia coli Nissle 1917 0.85 ECOLIN_RS16140 FAD assembly factor SdhE 0.70 ECOLIN_RS03850 succinate dehydrogenase membrane anchor subunit
Escherichia coli ECRC99 0.85 KEDOAH_08585 sdhE FAD assembly factor SdhE 0.68 KEDOAH_21020 sdhD succinate dehydrogenase membrane anchor subunit
Escherichia coli ECRC102 0.85 NIAGMN_17320 sdhE FAD assembly factor SdhE 0.68 NIAGMN_04995 sdhD succinate dehydrogenase membrane anchor subunit low > 80
Escherichia coli BL21 0.85 ECD_02729 flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair 0.70 ECD_00682 succinate dehydrogenase, membrane subunit, binds cytochrome b556 low > 61
Escherichia coli ECOR38 0.85 HEPCGN_18845 sdhE FAD assembly factor SdhE 0.70 HEPCGN_01290 sdhD succinate dehydrogenase membrane anchor subunit 0.44 4
Escherichia coli ECOR27 0.84 NOLOHH_11480 sdhE FAD assembly factor SdhE 0.70 NOLOHH_23330 sdhD succinate dehydrogenase membrane anchor subunit 0.23 41
Klebsiella pneumoniae MKP103 0.84 KDGMDA_04315 FAD assembly factor SdhE 0.76 KDGMDA_16715 succinate dehydrogenase cytochrome b556 subunit low > 94
Serratia liquefaciens MT49 0.84 IAI46_20760 FAD assembly factor SdhE 0.73 IAI46_06260 succinate dehydrogenase membrane anchor subunit low > 87
Klebsiella pneumoniae MRSN742743 0.84 GJGHJB_00780 sdhE FAD assembly factor SdhE 0.76 GJGHJB_03517 sdhC succinate dehydrogenase cytochrome b556 subunit low > 83
Erwinia amylovora T8 0.83 OLJFJH_08810 FAD assembly factor SdhE 0.75 OLJFJH_16965 succinate dehydrogenase membrane anchor subunit low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF2994 YgfY COG2938 0.69 GFF4636 Succinate dehydrogenase hydrophobic membrane anchor protein 0.73 4
Erwinia tracheiphila SCR3 0.82 LU632_RS05960 sdhE FAD assembly factor SdhE 0.80 LU632_RS16110 sdhD succinate dehydrogenase membrane anchor subunit 0.84 15
Erwinia tracheiphila HP pepo 2.2 0.82 IJEDHG_03210 sdhE FAD assembly factor SdhE 0.72 IJEDHG_02160 sdhD succinate dehydrogenase membrane anchor subunit low > 61
Pantoea sp. MT58 0.79 IAI47_03805 FAD assembly factor SdhE 0.75 IAI47_13760 succinate dehydrogenase membrane anchor subunit 0.64 7
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13516_RS04035 sdhE FAD assembly factor SdhE 0.75 PagCFBP13516_RS13870 sdhD succinate dehydrogenase membrane anchor subunit 0.81 17
Shewanella oneidensis MR-1 0.50 SO1339 conserved hypothetical protein (NCBI ptt file) 0.53 SO1927.1 hypothetical succinate dehydrogenase, hydrophobic subunit (NCBI ptt file)
Shewanella sp. ANA-3 0.49 Shewana3_3035 hypothetical protein (RefSeq) 0.54 Shewana3_1707 succinate dehydrogenase subunit D (RefSeq)
Shewanella loihica PV-4 0.48 Shew_1045 hypothetical protein (RefSeq) 0.64 Shew_1652 putative succinate dehydrogenase, hydrophobic subunit (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_12505 succinate dehydrogenase assembly factor 2 family protein 0.55 CSW01_10445 succinate dehydrogenase, hydrophobic membrane anchor protein
Alteromonas macleodii MIT1002 0.46 MIT1002_02723 Antitoxin CptB 0.41 MIT1002_01945 Succinate dehydrogenase hydrophobic membrane anchor subunit
Shewanella amazonensis SB2B 0.46 Sama_0871 hypothetical protein (RefSeq) 0.53 Sama_1424 succinate dehydrogenase, cytochrome b subunit (RefSeq)
Pseudomonas sp. S08-1 0.43 OH686_20030 Succinate dehydrogenase flavin-adding protein, antitoxin of CptAB toxin-antitoxin 0.40 OH686_01985 succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas aeruginosa MRSN321 0.41 PFGADD_04377 sdhE FAD assembly factor SdhE 0.44 PFGADD_03556 sdhD succinate dehydrogenase hydrophobic membrane anchor protein
Pseudomonas lactucae CFBP13502 0.41 GEMAOFIL_01569 FAD assembly factor SdhE 0.44 GEMAOFIL_01906 Succinate dehydrogenase hydrophobic membrane anchor subunit
Pseudomonas aeruginosa PUPa3 0.41 NPBIFN_04433 sdhE FAD assembly factor SdhE 0.44 NPBIFN_03592 sdhD succinate dehydrogenase hydrophobic membrane anchor protein
Pseudomonas aeruginosa PA14 0.41 IKLFDK_03250 FAD assembly factor SdhE 0.44 IKLFDK_07575 succinate dehydrogenase hydrophobic membrane anchor protein
Pseudomonas sp. BP01 0.41 JOY50_RS14650 succinate dehydrogenase assembly factor 2 0.45 JOY50_RS19060 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas orientalis W4I3 0.41 QF045_RS09820 succinate dehydrogenase assembly factor 2 0.45 QF045_RS11575 succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas putida KT2440 0.41 PP_1424 conserved protein of unknown function, DUF339 family 0.45 PP_4192 succinate dehydrogenase hydrophobic membrane anchor subunit
Pseudomonas segetis P6 0.41 ACVTMO_RS06925 FAD assembly factor SdhE 0.44 ACVTMO_RS11655 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas simiae WCS417 0.40 PS417_07105 hypothetical protein 0.44 PS417_08880 succinate dehydrogenase
Pseudomonas fluorescens SBW25 0.40 PFLU_RS07180 succinate dehydrogenase assembly factor 2 0.44 PFLU_RS08940 succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS07180 succinate dehydrogenase assembly factor 2 0.44 PFLU_RS08940 succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4519 YgfY COG2938 0.43 PfGW456L13_4272 Succinate dehydrogenase hydrophobic membrane anchor protein
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3320 YgfY COG2938 0.43 Pf1N1B4_3678 Succinate dehydrogenase hydrophobic membrane anchor protein
Pseudomonas sp. DMC3 0.40 GFF2275 FAD assembly factor SdhE 0.43 GFF2517 Succinate dehydrogenase hydrophobic membrane anchor subunit
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_2760 YgfY COG2938 0.43 Pf6N2E2_5852 Succinate dehydrogenase hydrophobic membrane anchor protein
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_04590 hypothetical protein 0.43 AO356_19680 succinate dehydrogenase
Pseudomonas stutzeri RCH2 0.40 Psest_3103 Uncharacterized conserved protein 0.40 Psest_2497 succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas sp. SVBP6 0.40 COO64_RS16510 succinate dehydrogenase assembly factor 2 0.42 COO64_RS18880 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
Pseudomonas sp. RS175 0.40 PFR28_00687 FAD assembly factor SdhE 0.42 PFR28_03099 Succinate dehydrogenase hydrophobic membrane anchor subunit
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_17610 hypothetical protein 0.41 AO353_01850 succinate dehydrogenase
Pseudomonas protegens RBAN4 0.38 FABNJH_07540 sdhE FAD assembly factor SdhE 0.43 FABNJH_08900 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein
Marinobacter adhaerens HP15 0.37 HP15_773 conserved hypothetical protein 0.45 HP15_1518 succinate dehydrogenase, hydrophobic membrane anchor
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_3961 Protein of unknown function DUF339 0.43 Psyr_2006 succinate dehydrogenase subunit D
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_3961 Protein of unknown function DUF339 0.43 Psyr_2006 succinate dehydrogenase subunit D
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_2177 Uncharacterized conserved protein 0.44 B158DRAFT_1421 succinate dehydrogenase, hydrophobic membrane anchor protein

Not shown: 4 genomes with orthologs for DZA65_RS03465 only; 15 genomes with orthologs for DZA65_RS06830 only