Conservation of cofitness between CSW01_14565 and CSW01_19115 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14565 type VI secretion system baseplate subunit TssF 1.0 CSW01_19115 AraC family transcriptional regulator 0.57 1
Dickeya dadantii 3937 0.53 DDA3937_RS07030 type VI secretion system baseplate subunit TssF 0.52 DDA3937_RS14520 AraC family transcriptional regulator low > 74
Pectobacterium carotovorum WPP14 0.52 HER17_RS04855 type VI secretion system baseplate subunit TssF 0.42 HER17_RS03055 AraC family transcriptional regulator low > 75
Pseudomonas putida KT2440 0.48 PP_2621 conserved protein of unknown function 0.35 PP_2383 Transcriptional regulator, AraC family low > 96
Pseudomonas segetis P6 0.39 MPMX49_00135 hypothetical protein 0.33 MPMX49_01729 Arabinose operon regulatory protein low > 75
Pseudomonas sp. DMC3 0.37 GFF454 hypothetical protein 0.23 GFF1069 HTH-type transcriptional activator RhaS low > 89
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2086 Protein ImpG/VasA 0.31 Pf1N1B4_2318 FIG229276: Transcriptional regulator, AraC family low > 87
Pseudomonas sp. S08-1 0.36 OH686_12825 T6SS component TssF (ImpG/VasA) 0.34 OH686_19610 Transcriptional regulator, AraC family low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_09425 type VI secretion protein 0.30 AO353_08275 AraC family transcriptional regulator low > 101
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS19965 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.34 DY961_RS00550 AraC family transcriptional regulator low > 100
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS54060 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.33 DQ20_RS40485 AraC family transcriptional regulator low > 101
Pseudomonas aeruginosa PA14 0.36 IKLFDK_07995 Protein ImpG/VasA 0.33 IKLFDK_16740 AraC family transcriptional regulator low > 98
Pseudomonas simiae WCS417 0.36 PS417_15310 type VI secretion protein 0.20 PS417_14185 transcriptional regulator low > 88
Pseudomonas stutzeri RCH2 0.36 Psest_0127 type VI secretion protein, VC_A0110 family 0.20 Psest_1369 AraC-type DNA-binding domain-containing proteins low > 67
Pseudomonas orientalis W4I3 0.36 QF045_RS14215 type VI secretion system baseplate subunit TssF 0.23 QF045_RS17305 AraC family transcriptional regulator low > 93
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_12145 type VI secretion protein 0.21 AO356_26135 AraC family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4301 Protein ImpG/VasA 0.21 Pf6N2E2_1100 L-rhamnose operon transcriptional activator RhaR low > 103
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS22110 type VI secretion protein ImpG 0.17 RR42_RS33370 AraC family transcriptional regulator low > 128
Pseudomonas sp. BP01 0.25 JOY50_RS19900 tssF type VI secretion system baseplate subunit TssF 0.34 JOY50_RS10660 AraC family transcriptional regulator low > 84
Klebsiella pneumoniae MKP103 0.24 KDGMDA_24740 type VI secretion system baseplate subunit TssF 0.25 KDGMDA_11200 AraC family transcriptional regulator low > 95
Rahnella sp. WP5 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF 0.22 EX31_RS08275 AraC family transcriptional regulator low > 89
Enterobacter sp. TBS_079 0.23 MPMX20_01644 hypothetical protein 0.24 MPMX20_00488 HTH-type transcriptional activator RhaS low > 85
Enterobacter asburiae PDN3 0.22 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family 0.24 EX28DRAFT_3395 AraC-type DNA-binding domain-containing proteins low > 76
Pantoea sp. MT58 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF 0.26 IAI47_17800 AraC family transcriptional regulator low > 76
Paraburkholderia graminis OAS925 0.21 ABIE53_003935 type VI secretion system protein ImpG 0.31 ABIE53_003072 AraC-like DNA-binding protein low > 113
Azospirillum sp. SherDot2 0.21 MPMX19_03419 hypothetical protein 0.25 MPMX19_01511 HTH-type transcriptional activator RhaR low > 112
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS20220 type VI secretion system baseplate subunit TssF 0.26 ABZR87_RS19175 AraC family transcriptional regulator low > 80
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS20160 type VI secretion protein 0.20 HSERO_RS19295 AraC family transcriptional regulator low > 78
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS20035 type VI secretion system baseplate subunit TssF 0.21 RALBFv3_RS20270 AraC family transcriptional regulator low > 76
Ralstonia solanacearum PSI07 0.20 RPSI07_RS02940 type VI secretion system baseplate subunit TssF 0.21 RPSI07_RS02595 AraC family transcriptional regulator low > 81
Variovorax sp. SCN45 0.20 GFF6367 T6SS component TssF (ImpG/VasA) 0.22 GFF535 Transcriptional regulator, AraC family low > 127
Ralstonia solanacearum UW163 0.20 UW163_RS19140 type VI secretion system baseplate subunit TssF 0.21 UW163_RS18905 AraC family transcriptional regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05367 type VI secretion system protein ImpG 0.30 H281DRAFT_04325 transcriptional regulator, AraC family low > 103
Pseudomonas sp. RS175 0.19 PFR28_02388 hypothetical protein 0.36 PFR28_02269 HTH-type transcriptional activator RhaS low > 88
Ralstonia solanacearum GMI1000 0.19 RS_RS20690 type VI secretion system baseplate subunit TssF 0.20 RS_RS20410 AraC family transcriptional regulator low > 80
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS31715 type VI secretion system baseplate subunit TssF 0.31 QEN71_RS04420 AraC family transcriptional regulator low > 153
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04600 type VI secretion protein 0.31 BPHYT_RS14560 AraC family transcriptional regulator low > 109
Pseudomonas sp. SVBP6 0.19 COO64_RS00470 tssF type VI secretion system baseplate subunit TssF 0.34 COO64_RS07890 AraC family transcriptional regulator — —
Pseudomonas fluorescens SBW25 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.23 PFLU_RS13270 AraC family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.23 PFLU_RS13270 AraC family transcriptional regulator low > 109
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_00062 hypothetical protein 0.22 GEMAOFIL_02770 HTH-type transcriptional activator RhaS low > 96
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS19815 type VI secretion system baseplate subunit TssF 0.26 PagCFBP13505_RS21125 AraC family transcriptional regulator low > 74
Agrobacterium fabrum C58 0.19 Atu4337 hypothetical protein 0.29 Atu1081 transcriptional regulator, AraC family low > 89
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS04940 type VI secretion system baseplate subunit TssF 0.26 ABZR86_RS22175 AraC family transcriptional regulator low > 74
Serratia liquefaciens MT49 0.16 IAI46_05550 type VI secretion system baseplate subunit TssF 0.24 IAI46_13040 AraC family transcriptional regulator low > 87
Bosea sp. OAE506 0.16 ABIE41_RS14385 type VI secretion system baseplate subunit TssF 0.21 ABIE41_RS12680 AraC family transcriptional regulator low > 77

Not shown: 20 genomes with orthologs for CSW01_14565 only; 11 genomes with orthologs for CSW01_19115 only