Conservation of cofitness between CSW01_03755 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03755 recombination-associated protein RdgC 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.78 17
Dickeya dianthicola 67-19 0.59 HGI48_RS05465 recombination-associated protein RdgC 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) — —
Dickeya dianthicola ME23 0.59 DZA65_RS05790 recombination-associated protein RdgC 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS05405 recombination-associated protein RdgC 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Erwinia amylovora T8 0.58 OLJFJH_18235 recombination-associated protein RdgC 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) low > 58
Rahnella sp. WP5 0.58 EX31_RS21990 recombination-associated protein RdgC 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Pantoea sp. MT58 0.58 IAI47_14910 recombination-associated protein RdgC 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Klebsiella pneumoniae MKP103 0.58 KDGMDA_14285 recombination-associated protein RdgC 0.81 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) low > 95
Serratia liquefaciens MT49 0.58 IAI46_04710 recombination-associated protein RdgC 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 87
Klebsiella michiganensis M5al 0.57 BWI76_RS06205 recombination-associated protein RdgC 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS10255 recombination-associated protein RdgC 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 74
Erwinia tracheiphila HP pepo 2.2 0.57 IJEDHG_26160 rdgC recombination-associated protein RdgC 0.78 IJEDHG_11970 pckA phosphoenolpyruvate carboxykinase (ATP) low > 61
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02385 recombination-associated protein RdgC 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Escherichia coli ECOR38 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Escherichia coli ECRC62 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.50 57
Escherichia fergusonii Becca 0.57 EFB2_03663 Recombination-associated protein RdgC 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli BL21 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli BW25113 0.57 b0393 rdgC recombination associated protein (NCBI) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli ECOR27 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli ECRC100 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 79
Escherichia coli ECRC101 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Erwinia tracheiphila SCR3 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 73
Escherichia coli ECRC102 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4290 DNA recombination-dependent growth factor C 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Escherichia coli ECRC99 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC98 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Enterobacter sp. TBS_079 0.56 MPMX20_00982 Recombination-associated protein RdgC 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Pectobacterium carotovorum WPP14 0.55 HER17_RS16060 recombination-associated protein RdgC 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Shewanella amazonensis SB2B 0.49 Sama_1072 rdgC recombination associated protein (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Shewanella sp. ANA-3 0.49 Shewana3_2881 rdgC recombination associated protein (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.49 SO1556 conserved hypothetical protein (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.48 Shew_2751 rdgC recombination associated protein (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS00580 rdgC;inference=COORDINATES recombination-associated protein RdgC 0.34 DY961_RS11825 phosphoenolpyruvate carboxykinase — —
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS40455 rdgC;inference=COORDINATES recombination-associated protein RdgC 0.34 DQ20_RS50285 phosphoenolpyruvate carboxykinase low > 101
Pseudomonas aeruginosa PA14 0.44 IKLFDK_16705 recombination-associated protein RdgC 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase low > 98
Pseudomonas sp. BP01 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1588 Putative exonuclease, RdgC 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.31 64
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_19265 recombination-associated protein RdgC 0.32 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1588 Putative exonuclease, RdgC 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas sp. S08-1 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas sp. RS175 0.42 PFR28_03182 Recombination-associated protein RdgC 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Pseudomonas sp. SVBP6 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_02515 recombination-associated protein RdgC 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas segetis P6 0.41 MPMX49_01735 Recombination-associated protein RdgC 0.32 MPMX49_00777 Phosphoenolpyruvate carboxykinase (ATP) low > 75
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas sp. DMC3 0.41 GFF2574 Recombination-associated protein RdgC 0.33 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas fluorescens SBW25 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Marinobacter adhaerens HP15 0.40 HP15_1221 recombination-associated protein rdgC 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas orientalis W4I3 0.40 QF045_RS11910 recombination-associated protein RdgC 0.35 QF045_RS04340 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01972 Recombination-associated protein RdgC 0.35 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) low > 96
Pseudomonas simiae WCS417 0.40 PS417_09245 recombinase RdgC 0.34 PS417_01210 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.40 Psest_1532 DNA recombination-dependent growth factor C 0.33 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) low > 67
Alteromonas macleodii MIT1002 0.37 MIT1002_00749 Recombination-associated protein RdgC 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] low > 70
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_1192 DNA recombination-dependent growth factor C 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) low > 40

Not shown: 23 genomes with orthologs for CSW01_03755 only; 21 genomes with orthologs for CSW01_13810 only