| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_08150 | | agglutination protein | 1.0 | CSW01_12735 | | RidA family protein | 0.73 | 18 |
| Shewanella loihica PV-4 | 0.42 | Shew_0310 | | TolC family type I secretion outer membrane protein (RefSeq) | 0.41 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.42 | Sama_3261 | | type I secretion outer membrane protein, TolC (RefSeq) | 0.39 | Sama_0263 | | YjgF-like protein (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_0379 | | TolC family type I secretion outer membrane protein (RefSeq) | 0.41 | Shewana3_2971 | | putative endoribonuclease L-PSP (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.41 | SO4320 | aggA | agglutination protein (NCBI ptt file) | 0.39 | SO1404 | | endoribonuclease L-PSP, putative (NCBI ptt file) | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS05865 | | TolC family outer membrane protein | 0.72 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 75 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_00783 | | Outer membrane efflux protein BepC | 0.42 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.30 | OH686_20630 | | Type I secretion outer membrane protein, TolC family or Type I secretion system, outer membrane component LapE | 0.40 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | low | > 80 |
| Pseudomonas sp. DMC3 | 0.30 | GFF2376 | | Outer membrane efflux protein BepC | 0.43 | GFF420 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_04070 | | channel protein TolC | 0.43 | AO356_12475 | | reactive intermediate/imine deaminase | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.30 | GEMAOFIL_00511 | | Outer membrane efflux protein BepC | 0.42 | GEMAOFIL_00035 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.30 | COO64_RS12350 | | TolC family outer membrane protein | 0.43 | COO64_RS01560 | | RidA family protein | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_520 | | Type I secretion system, outer membrane component LapE # AggA | 0.43 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_11185 | | channel protein TolC | 0.43 | AO353_09285 | | reactive intermediate/imine deaminase | low | > 101 |
| Pseudomonas segetis P6 | 0.29 | MPMX49_02943 | | Outer membrane efflux protein BepC | 0.42 | MPMX49_00037 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_4430 | | Type I secretion system, outer membrane component LapE | 0.43 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_2650 | | Type I secretion system, outer membrane component LapE # AggA | 0.44 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | low | > 103 |
| Pseudomonas orientalis W4I3 | 0.28 | QF045_RS03610 | | TolC family outer membrane protein | 0.42 | QF045_RS02190 | | RidA family protein | low | > 93 |
| Pseudomonas sp. BP01 | 0.28 | JOY50_RS01170 | | TolC family outer membrane protein | 0.42 | JOY50_RS08980 | | RidA family protein | low | > 84 |
| Pseudomonas putida KT2440 | 0.28 | PP_4519 | | Agglutination protein | 0.42 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | low | > 96 |
| Desulfovibrio vulgaris Miyazaki F | 0.21 | DvMF_1494 | | type I secretion outer membrane protein, TolC family (RefSeq) | 0.34 | DvMF_1512 | | endoribonuclease L-PSP (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.20 | DVU1013 | | type I secretion outer membrane protein, TolC family (TIGR) | 0.49 | DVU2203 | | endoribonuclease, L-PSP family (TIGR) | low | > 55 |
| Rhizobium sp. OAE497 | 0.19 | ABIE40_RS22040 | | TolC family outer membrane protein | 0.25 | ABIE40_RS21405 | | RidA family protein | low | > 107 |
| Bosea sp. OAE506 | 0.17 | ABIE41_RS15655 | | TolC family outer membrane protein | 0.19 | ABIE41_RS17300 | | RidA family protein | — | — |
| Sinorhizobium meliloti 1021 | 0.14 | SMc02082 | | outer membrane secretion protein | 0.24 | SM_b21139 | | translation initiation inhibitors | — | — |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_013360 | | TolC family outer membrane protein | 0.20 | TX73_004470 | | RidA family protein | — | — |
| Azospirillum sp. SherDot2 | 0.13 | MPMX19_01309 | | Outer membrane efflux protein BepC | 0.26 | MPMX19_04018 | | 2-aminomuconate deaminase | — | — |
| Pantoea sp. MT58 | 0.13 | IAI47_06500 | | TolC family outer membrane protein | 0.78 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 76 |
| Pseudomonas aeruginosa PA14 | 0.13 | IKLFDK_09145 | | TolC family protein | 0.43 | IKLFDK_26760 | | reactive intermediate/imine deaminase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.13 | DQ20_RS55195 | | TolC family protein | 0.43 | DQ20_RS49540 | | RidA family protein | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.13 | DY961_RS21125 | | TolC family protein | 0.43 | DY961_RS12585 | | RidA family protein | low | > 100 |
| Pantoea agglomerans CFBP13505 P0401 | 0.12 | PagCFBP13505_RS00485 | | TolC family outer membrane protein | 0.77 | PagCFBP13505_RS08965 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 74 |
| Escherichia coli ECOR38 | 0.12 | HEPCGN_06695 | tolC | transporter | 0.81 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 88 |
| Escherichia coli ECRC102 | 0.12 | NIAGMN_06110 | tolC | transporter | 0.81 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 80 |
| Escherichia coli ECRC99 | 0.12 | KEDOAH_19910 | tolC | transporter | 0.81 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | — | — |
| Escherichia coli ECRC98 | 0.12 | JDDGAC_11705 | tolC | transporter | 0.81 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 87 |
| Escherichia coli ECRC101 | 0.12 | MCAODC_27280 | tolC | transporter | 0.81 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 87 |
| Escherichia coli ECRC100 | 0.12 | OKFHMN_08060 | tolC | transporter | 0.81 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 79 |
| Acinetobacter baumannii LAC-4 | 0.11 | RR41_RS13290 | | TolC family protein | 0.42 | RR41_RS01650 | | RidA family protein | low | > 55 |
| Rahnella sp. WP5 | 0.11 | EX31_RS19265 | | TolC family outer membrane protein | 0.74 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 89 |
| Azospirillum brasilense Sp245 | 0.10 | AZOBR_RS18205 | | outer membrane efflux protein | 0.44 | AZOBR_RS32435 | | dfrA | — | — |
| Enterobacter sp. TBS_079 | 0.10 | MPMX20_02199 | | Outer membrane efflux protein BepC | 0.79 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.10 | EX28DRAFT_1346 | | type I secretion outer membrane protein, TolC family | 0.77 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | low | > 76 |
| Sphingobium sp. HT1-2 | 0.09 | GFF4527 | | Type I secretion outer membrane protein, TolC family | 0.27 | GFF1821 | | Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein | low | > 95 |
| Variovorax sp. SCN45 | 0.09 | GFF7401 | | Type I secretion system, outer membrane component LapE | 0.31 | GFF6707 | | RidA/YER057c/UK114 superfamily protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.09 | Dshi_2098 | | type I secretion outer membrane protein, TolC family (RefSeq) | 0.29 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.07 | HMPREF1058_RS18055 | | TolC family protein | 0.48 | HMPREF1058_RS18400 | | RidA family protein | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.07 | ABI39_RS14380 | | TolC family protein | 0.47 | ABI39_RS14715 | | RidA family protein | low | > 72 |
Not shown: 2 genomes with orthologs for CSW01_08150 only; 66 genomes with orthologs for CSW01_12735 only