Conservation of cofitness between CSW01_09385 and CSW01_12415 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09385 hypothetical protein 1.0 CSW01_12415 two-component sensor histidine kinase BarA 0.47 11
Klebsiella pneumoniae MKP103 0.76 KDGMDA_19155 UPF0229 protein KPK_3252 0.48 KDGMDA_03345 two-component sensor histidine kinase BarA low > 95
Serratia liquefaciens MT49 0.75 IAI46_14380 YeaH/YhbH family protein 0.49 IAI46_03590 two-component sensor histidine kinase BarA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01948 hypothetical protein 0.48 OHPLBJKB_00945 Signal transduction histidine-protein kinase BarA low > 74
Klebsiella michiganensis M5al 0.75 BWI76_RS11480 hypothetical protein 0.47 BWI76_RS22815 hybrid sensor histidine kinase/response regulator low > 92
Escherichia coli BL21 0.75 ECD_01753 UPF0229 family protein 0.48 ECD_02631 hybrid sensory histidine kinase, in two-component regulatory system with UvrY — —
Escherichia coli ECRC98 0.75 JDDGAC_01280 yeaH UPF0229 protein YeaH 0.48 JDDGAC_23905 barA two-component sensor histidine kinase BarA low > 87
Escherichia coli ECRC101 0.75 MCAODC_18705 yeaH UPF0229 protein YeaH 0.48 MCAODC_10765 barA two-component sensor histidine kinase BarA low > 87
Escherichia coli ECRC99 0.75 KEDOAH_01405 yeaH UPF0229 protein YeaH 0.48 KEDOAH_07890 barA two-component sensor histidine kinase BarA — —
Escherichia coli ECRC102 0.75 NIAGMN_01360 yeaH UPF0229 protein YeaH 0.48 NIAGMN_18010 barA two-component sensor histidine kinase BarA low > 80
Escherichia coli ECRC62 0.75 BNILDI_16020 yeaH UPF0229 protein YeaH 0.48 BNILDI_10620 barA two-component sensor histidine kinase BarA low > 75
Escherichia coli ECRC100 0.75 OKFHMN_26705 yeaH UPF0229 protein YeaH 0.48 OKFHMN_20240 barA two-component sensor histidine kinase BarA low > 79
Escherichia coli ECOR27 0.75 NOLOHH_17235 yeaH UPF0229 protein YeaH 0.48 NOLOHH_12115 barA two-component sensor histidine kinase BarA — —
Escherichia coli BW25113 0.75 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.48 b2786 barA hybrid sensory histidine kinase, in two-component regulatory system with UvrY (NCBI) low > 76
Escherichia coli Nissle 1917 0.75 ECOLIN_RS09945 YeaH/YhbH family protein 0.48 ECOLIN_RS15525 two-component sensor histidine kinase BarA low > 55
Escherichia fergusonii Becca 0.75 EFB2_02210 hypothetical protein 0.48 EFB2_01131 Signal transduction histidine-protein kinase BarA low > 86
Escherichia coli ECOR38 0.75 HEPCGN_05095 yeaH UPF0229 protein YeaH 0.48 HEPCGN_19490 barA two-component sensor histidine kinase BarA 0.56 6
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1777 Uncharacterized conserved protein 0.48 EX28DRAFT_2866 Uncharacterized domain of BarA-like signal transduction histidine kinases low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01839 hypothetical protein 0.48 MPMX20_03655 Signal transduction histidine-protein kinase BarA 0.41 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3472 UPF0229 protein YeaH 0.47 GFF4839 BarA sensory histidine kinase (= VarS = GacS) low > 78
Pectobacterium carotovorum WPP14 0.73 HER17_RS11155 YeaH/YhbH family protein 0.44 HER17_RS04105 two-component sensor histidine kinase BarA low > 75
Pantoea sp. MT58 0.73 IAI47_08920 YeaH/YhbH family protein 0.46 IAI47_04110 two-component sensor histidine kinase BarA low > 76
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS02755 YeaH/YhbH family protein 0.46 PagCFBP13505_RS16860 two-component sensor histidine kinase BarA low > 74
Rahnella sp. WP5 0.73 EX31_RS06255 YeaH/YhbH family protein 0.47 EX31_RS07965 two-component sensor histidine kinase BarA low > 89
Erwinia amylovora T8 0.72 OLJFJH_13195 UPF0229 protein ETA_15540 0.48 OLJFJH_09235 two-component sensor histidine kinase BarA low > 58
Dickeya dianthicola 67-19 0.72 HGI48_RS10250 YeaH/YhbH family protein 0.47 HGI48_RS17080 two-component sensor histidine kinase BarA low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS10240 YeaH/YhbH family protein 0.47 DDA3937_RS17025 two-component sensor histidine kinase BarA low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS10725 YeaH/YhbH family protein 0.47 DZA65_RS18155 two-component sensor histidine kinase BarA low > 75
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_22595 yeaH UPF0229 protein ETA_15540 0.47 IJEDHG_17365 barA two-component sensor histidine kinase BarA — —
Shewanella oneidensis MR-1 0.68 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.40 SO_3457 hybrid sensory histidine kinase BarA (RefSeq) low > 76
Shewanella loihica PV-4 0.66 Shew_1832 hypothetical protein (RefSeq) 0.40 Shew_1200 hybrid sensory histidine kinase BarA (RefSeq) low > 60
Shewanella amazonensis SB2B 0.66 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.39 Sama_1031 hybrid sensory histidine kinase BarA (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_1637 hypothetical protein (RefSeq) 0.41 Shewana3_1109 hybrid sensory histidine kinase BarA (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.59 IKLFDK_22475 UPF0229 protein PA14_07660 0.27 IKLFDK_04170 two-component system sensor histidine kinase GacS low > 98
Pseudomonas aeruginosa MRSN321 0.59 DY961_RS22960 YeaH/YhbH family protein 0.27 DY961_RS07805 gacS;inference=COORDINATES two-component system sensor histidine kinase GacS low > 100
Pseudomonas aeruginosa PUPa3 0.59 DQ20_RS36385 YeaH/YhbH family protein 0.27 DQ20_RS44990 gacS;inference=COORDINATES two-component system sensor histidine kinase GacS low > 101
Pseudomonas sp. SVBP6 0.58 COO64_RS22535 YeaH/YhbH family protein 0.27 COO64_RS07350 response regulator low > 93
Pseudomonas sp. BP01 0.58 JOY50_RS18115 YeaH/YhbH family protein 0.26 JOY50_RS23885 response regulator low > 84
Pseudomonas putida KT2440 0.57 PP_0396 conserved protein of unknown function 0.26 PP_1650 Sensor protein GacS low > 96
Pseudomonas segetis P6 0.57 MPMX49_00874 hypothetical protein 0.27 MPMX49_01651 Signal transduction histidine-protein kinase BarA low > 75
Pseudomonas sp. S08-1 0.57 OH686_15015 UPF0229 protein YeaH 0.27 OH686_18945 Signal transduction histidine-protein kinase BarA low > 80
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.28 Pf6N2E2_5720 BarA sensory histidine kinase (= VarS = GacS) low > 103
Pseudomonas orientalis W4I3 0.57 QF045_RS00235 YeaH/YhbH family protein 0.28 QF045_RS18125 response regulator low > 93
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.28 AO356_19045 chemotaxis protein CheY low > 104
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.28 PFLU_RS18410 response regulator low > 109
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_05287 hypothetical protein 0.28 GEMAOFIL_03601 Signal transduction histidine-protein kinase BarA 0.85 6
Pseudomonas fluorescens SBW25 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.28 PFLU_RS18410 response regulator low > 109
Pseudomonas sp. RS175 0.57 PFR28_04069 hypothetical protein 0.27 PFR28_03227 Signal transduction histidine-protein kinase BarA low > 88
Pseudomonas stutzeri RCH2 0.57 Psest_3673 Uncharacterized conserved protein 0.27 Psest_1635 Signal transduction histidine kinase low > 67
Pseudomonas sp. DMC3 0.57 GFF42 hypothetical protein 0.27 GFF4823 Signal transduction histidine-protein kinase BarA low > 89
Pseudomonas simiae WCS417 0.56 PS417_25835 hypothetical protein 0.28 PS417_16370 chemotaxis protein CheY low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4632 Protein of unknown function DUF444 0.28 Psyr_3698 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4632 Protein of unknown function DUF444 0.28 Psyr_3698 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt low > 86
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2522 FIG002076: hypothetical protein 0.27 Pf1N1B4_3501 BarA sensory histidine kinase (= VarS = GacS) low > 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.27 AO353_02735 chemotaxis protein CheY low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1195 FIG002076: hypothetical protein 0.28 PfGW456L13_2029 BarA sensory histidine kinase (= VarS = GacS) low > 87
Marinobacter adhaerens HP15 0.55 HP15_2934 protein YeaH 0.25 HP15_788 multi-sensor hybrid histidine kinase low > 73

Not shown: 19 genomes with orthologs for CSW01_09385 only; 1 genomes with orthologs for CSW01_12415 only