Conservation of cofitness between CSW01_03020 and CSW01_11215 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03020 serine endoprotease DegQ 1.0 CSW01_11215 flagellar hook assembly protein FlgD 0.65 16
Shewanella amazonensis SB2B 0.63 Sama_3073 serine protease (RefSeq) 0.42 Sama_2316 flgD flagellar basal body rod modification protein (RefSeq) 0.37 45
Shewanella oneidensis MR-1 0.60 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) 0.41 SO3248 flgD basal-body rod modification protein FlgD (NCBI ptt file) — —
Shewanella sp. ANA-3 0.60 Shewana3_0690 peptidase Do (RefSeq) 0.41 Shewana3_1323 flgD flagellar basal body rod modification protein (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_3296 protease Do (RefSeq) 0.44 Shew_1347 flgD flagellar basal body rod modification protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.59 MIT1002_00842 Periplasmic pH-dependent serine endoprotease DegQ precursor 0.39 MIT1002_01041 Basal-body rod modification protein FlgD low > 70
Rahnella sp. WP5 0.56 EX31_RS12475 Do family serine endopeptidase 0.22 EX31_RS11305 flagellar hook assembly protein FlgD low > 89
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4948.1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 0.25 Xcc-8004.2780.1 Flagellar basal-body rod modification protein FlgD low > 74
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS06430 Do family serine endopeptidase 0.28 LRK54_RS13415 flagellar hook capping protein low > 59
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS17720 Do family serine endopeptidase 0.28 LRK53_RS15165 flagellar hook capping protein low > 60
Rhodanobacter denitrificans MT42 0.37 LRK55_RS06175 Do family serine endopeptidase 0.26 LRK55_RS13155 flagellar hook capping FlgD N-terminal domain-containing protein low > 63
Lysobacter sp. OAE881 0.37 ABIE51_RS03265 trypsin-like peptidase domain-containing protein 0.26 ABIE51_RS16680 flagellar hook capping FlgD N-terminal domain-containing protein low > 62
Methylophilus sp. DMC18 0.30 GFF1457 Periplasmic pH-dependent serine endoprotease DegQ 0.26 GFF561 Basal-body rod modification protein FlgD low > 43
Pseudomonas aeruginosa PA14 0.29 IKLFDK_03285 serine protease MucD 0.30 IKLFDK_04955 flagellar basal-body rod modification protein FlgD low > 101
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS07245 DegQ family serine endoprotease 0.25 PFLU_RS23170 flagellar hook assembly protein FlgD low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS07245 DegQ family serine endoprotease 0.25 PFLU_RS23170 flagellar hook assembly protein FlgD low > 109
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_4513 HtrA protease/chaperone protein 0.31 PfGW456L13_2003 Flagellar basal-body rod modification protein FlgD low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_17640 serine peptidase 0.26 AO353_02850 flagellar biosynthesis protein FlgD low > 101
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS21975 peptidase 0.19 HSERO_RS10190 flagellar basal body rod modification protein FlgD low > 78
Marinobacter adhaerens HP15 0.28 HP15_779 serine protease MucD precursor 0.27 HP15_1469 flagellar hook capping protein low > 73
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3326 HtrA protease/chaperone protein 0.24 Pf1N1B4_3474 Flagellar basal-body rod modification protein FlgD — —
Pseudomonas stutzeri RCH2 0.28 Psest_3096 periplasmic serine protease, Do/DeqQ family 0.30 Psest_2966 Flagellar hook capping protein — —
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_1382 periplasmic serine protease, Do/DeqQ family 0.25 Ga0059261_2091 Flagellar hook capping protein low > 68
Pseudomonas sp. DMC3 0.28 GFF2280 Periplasmic serine endoprotease DegP 0.30 GFF4848 Basal-body rod modification protein FlgD low > 89
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2753 HtrA protease/chaperone protein 0.26 Pf6N2E2_5696 Flagellar basal-body rod modification protein FlgD low > 103
Pseudomonas sp. SVBP6 0.28 COO64_RS16540 DegQ family serine endoprotease 0.24 COO64_RS21390 flgD flagellar hook assembly protein FlgD low > 93
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_04560 serine peptidase 0.26 AO356_18925 flagellar biosynthesis protein FlgD low > 104
Pseudomonas putida KT2440 0.28 PP_1430 putative periplasmic serine endoprotease DegP-like 0.24 PP_4389 Flagellar basal-body rod modification protein FlgD low > 96
Pseudomonas simiae WCS417 0.28 PS417_07135 serine peptidase 0.25 PS417_21560 flagellar basal body rod modification protein FlgD — —
Pseudomonas sp. BP01 0.28 JOY50_RS14680 DegQ family serine endoprotease 0.25 JOY50_RS00785 flgD flagellar hook assembly protein FlgD low > 84
Pseudomonas sp. S08-1 0.27 OH686_20060 HtrA protease/chaperone protein 0.30 OH686_02965 Flagellar basal-body rod modification protein FlgD low > 80

Not shown: 52 genomes with orthologs for CSW01_03020 only; 3 genomes with orthologs for CSW01_11215 only