Conservation of cofitness between CSW01_05385 and CSW01_11205 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05385 YcgN family cysteine cluster protein 1.0 CSW01_11205 flagellar basal-body rod protein FlgF 0.57 14
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0761 Uncharacterized conserved protein 0.35 EX28DRAFT_1855 flagellar hook-basal body protein low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_02704 hypothetical protein 0.35 MPMX20_01756 Flagellar basal-body rod protein FlgF low > 85
Escherichia coli ECOR38 0.66 HEPCGN_24695 ycgN YcgN family cysteine cluster protein 0.34 HEPCGN_23835 flgF flagellar basal-body rod protein FlgF low > 88
Escherichia fergusonii Becca 0.66 EFB2_02750 hypothetical protein 0.34 EFB2_02897 Flagellar basal-body rod protein FlgF low > 86
Escherichia coli ECRC102 0.66 NIAGMN_27975 ycgN YcgN family cysteine cluster protein 0.34 NIAGMN_24175 flgF flagellar basal-body rod protein FlgF low > 80
Escherichia coli ECRC100 0.66 OKFHMN_28245 ycgN YcgN family cysteine cluster protein 0.34 OKFHMN_03655 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC98 0.66 JDDGAC_06265 ycgN YcgN family cysteine cluster protein 0.34 JDDGAC_07315 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli Nissle 1917 0.66 ECOLIN_RS07145 YcgN family cysteine cluster protein 0.34 ECOLIN_RS06235 flagellar basal-body rod protein FlgF — —
Escherichia coli ECOR27 0.66 NOLOHH_20775 ycgN YcgN family cysteine cluster protein 0.34 NOLOHH_21185 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli ECRC101 0.66 MCAODC_21925 ycgN YcgN family cysteine cluster protein 0.34 MCAODC_23015 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli BW25113 0.66 b1181 ycgN conserved protein (RefSeq) 0.34 b1077 flgF flagellar component of cell-proximal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECRC99 0.66 KEDOAH_25260 ycgN YcgN family cysteine cluster protein 0.34 KEDOAH_24100 flgF flagellar basal-body rod protein FlgF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2813 YcgN (Fragment) 0.33 GFF3358 Flagellar basal-body rod protein FlgF low > 78
Escherichia coli BL21 0.65 ECD_01156 UPF0153 family cysteine cluster protein 0.34 ECD_01073 flagellar component of cell-proximal portion of basal-body rod — —
Erwinia amylovora T8 0.64 OLJFJH_13140 YcgN family cysteine cluster protein 0.31 OLJFJH_15605 flagellar biosynthesis protein FlgF low > 58
Pantoea sp. MT58 0.64 IAI47_08870 YcgN family cysteine cluster protein 0.32 IAI47_12145 flagellar basal body rod protein FlgF low > 76
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13516_RS09005 YcgN family cysteine cluster protein 0.32 PagCFBP13516_RS12205 flagellar basal body rod protein FlgF low > 80
Erwinia tracheiphila SCR3 0.63 LU632_RS13100 YcgN family cysteine cluster protein 0.29 LU632_RS10415 flagellar basal body rod protein FlgF low > 73
Serratia liquefaciens MT49 0.63 IAI46_14490 YcgN family cysteine cluster protein 0.34 IAI46_15940 flagellar basal body rod protein FlgF low > 87
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_22495 ycgN YcgN family cysteine cluster protein 0.29 IJEDHG_21065 flgF flagellar biosynthesis protein FlgF low > 61
Dickeya dianthicola 67-19 0.62 HGI48_RS11225 YcgN family cysteine cluster protein 0.30 HGI48_RS13505 flagellar basal body rod protein FlgF low > 71
Dickeya dianthicola ME23 0.61 DZA65_RS11570 YcgN family cysteine cluster protein 0.30 DZA65_RS13990 flagellar basal body rod protein FlgF low > 75
Dickeya dadantii 3937 0.61 DDA3937_RS11190 YcgN family cysteine cluster protein 0.30 DDA3937_RS13460 flagellar basal body rod protein FlgF low > 74
Pectobacterium carotovorum WPP14 0.61 HER17_RS11240 YcgN family cysteine cluster protein 0.32 HER17_RS08185 flagellar basal body rod protein FlgF low > 75
Rahnella sp. WP5 0.60 EX31_RS10560 YcgN family cysteine cluster protein 0.31 EX31_RS11295 flagellar basal body rod protein FlgF low > 89
Shewanella oneidensis MR-1 0.59 SO2573 conserved hypothetical protein (NCBI ptt file) 0.57 SO3245 flgF flagellar basal-body rod protein FlgF (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.57 Shewana3_2379 hypothetical protein (RefSeq) 0.56 Shewana3_1325 flgF flagellar basal body rod protein FlgF (RefSeq) low > 73
Shewanella amazonensis SB2B 0.55 Sama_1927 hypothetical protein (RefSeq) 0.57 Sama_2314 flgF flagellar basal body rod protein FlgF (RefSeq) low > 62
Shewanella loihica PV-4 0.54 Shew_2181 hypothetical protein (RefSeq) 0.60 Shew_1349 flgF flagellar basal body rod protein FlgF (RefSeq) low > 60
Pseudomonas sp. BP01 0.54 JOY50_RS01535 YcgN family cysteine cluster protein 0.47 JOY50_RS00770 flagellar basal body rod protein FlgF low > 84
Pseudomonas putida KT2440 0.53 PP_4587 conserved protein of unknown function 0.47 PP_4386 flagellar basal-body rod protein FlgF low > 96
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4492 YcgN (Fragment) 0.46 PfGW456L13_4387 Flagellar basal-body rod protein FlgF low > 87
Pseudomonas protegens RBAN4 0.52 FABNJH_07820 ycgN YcgN family cysteine cluster protein 0.46 FABNJH_08385 flgF Flagellar basal-body rod protein FlgF — —
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3349 YcgN (Fragment) 0.46 Pf1N1B4_3568 Flagellar basal-body rod protein FlgF — —
Pseudomonas sp. DMC3 0.52 GFF2314 hypothetical protein 0.45 GFF2416 Flagellar basal-body rod protein FlgF low > 89
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_2723 YcgN (Fragment) 0.45 Pf6N2E2_2628 Flagellar basal-body rod protein FlgF low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_04400 hypothetical protein 0.44 AO356_03930 flagellar biosynthesis protein FlgF low > 104
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_17875 hypothetical protein 0.45 AO353_18595 flagellar biosynthesis protein FlgF low > 101
Sphingobium sp. HT1-2 0.50 GFF4158 UPF0260 protein YcgN 0.31 GFF3710 Flagellar basal-body rod protein FlgF low > 95
Pseudomonas sp. RS175 0.50 PFR28_00716 hypothetical protein 0.45 PFR28_00804 Flagellar basal-body rod protein FlgF low > 88
Pseudomonas sp. S08-1 0.50 OH686_05300 UPF0260 protein YcgN 0.46 OH686_02955 Flagellar basal-body rod protein FlgF low > 80
Pseudomonas sp. SVBP6 0.50 COO64_RS22310 YcgN family cysteine cluster protein 0.46 COO64_RS21375 flagellar basal body rod protein FlgF low > 91
Pseudomonas segetis P6 0.50 ACVTMO_RS09140 YcgN family cysteine cluster protein 0.45 ACVTMO_RS15670 flagellar basal body rod protein FlgF low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_1567 Uncharacterized conserved protein UCP006173 0.47 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_1567 Uncharacterized conserved protein UCP006173 0.47 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_2183 Uncharacterized conserved protein 0.31 Ga0059261_2093 flagellar basal-body rod protein FlgF low > 68
Marinobacter adhaerens HP15 0.49 HP15_1880 uncharacterized conserved protein UCP006173 0.47 HP15_1471 flagellar basal-body rod FlgF 0.69 52
Pseudomonas orientalis W4I3 0.49 QF045_RS10050 YcgN family cysteine cluster protein 0.45 QF045_RS22020 flagellar basal body rod protein FlgF low > 93
Pseudomonas simiae WCS417 0.49 PS417_07400 hypothetical protein 0.45 PS417_19890 flagellar basal body rod protein FlgF — —
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_01613 hypothetical protein 0.45 GEMAOFIL_04176 Flagellar basal-body rod protein FlgF low > 96
Pseudomonas fluorescens SBW25 0.49 PFLU_RS07485 YcgN family cysteine cluster protein 0.45 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS07485 YcgN family cysteine cluster protein 0.45 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Pseudomonas stutzeri RCH2 0.48 Psest_2992 Uncharacterized conserved protein 0.47 Psest_2964 flagellar basal-body rod protein FlgF low > 67
Alteromonas macleodii MIT1002 0.48 MIT1002_02583 hypothetical protein 0.51 MIT1002_01043 Putative proximal rod protein low > 70
Pseudomonas aeruginosa PA14 0.47 IKLFDK_06165 YcgN family cysteine cluster protein 0.47 IKLFDK_04965 flagellar basal-body rod protein FlgF low > 98
Pseudomonas aeruginosa MRSN321 0.47 PFGADD_03699 ycgN YcgN family cysteine cluster protein 0.47 PFGADD_04049 flgF flagellar basal-body rod protein FlgF low > 99
Pseudomonas aeruginosa PUPa3 0.47 NPBIFN_03740 ycgN YcgN family cysteine cluster protein 0.47 NPBIFN_04108 flgF flagellar basal-body rod protein FlgF low > 101

Not shown: 20 genomes with orthologs for CSW01_05385 only; 25 genomes with orthologs for CSW01_11205 only