Conservation of cofitness between CSW01_03330 and CSW01_10385 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03330 transcription elongation factor GreA 1.0 CSW01_10385 Fe(2+) transporter permease subunit FeoB 0.48 15
Shewanella sp. ANA-3 0.71 Shewana3_1017 transcription elongation factor GreA (RefSeq) 0.49 Shewana3_2670 ferrous iron transport protein B (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO1191 greA transcription elongation factor GreA (NCBI ptt file) 0.49 SO1784 feoB ferrous iron transport protein B (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.71 Shew_2837 transcription elongation factor GreA (RefSeq) 0.50 Shew_2517 ferrous iron transport protein B (RefSeq) — —
Shewanella amazonensis SB2B 0.69 Sama_0951 GreA/GreB family elongation factor (RefSeq) 0.49 Sama_1215 ferrous iron transport protein B (RefSeq) — —
Escherichia coli ECRC99 0.68 KEDOAH_10105 greA transcription elongation factor GreA 0.35 KEDOAH_11125 feoB Fe(2+) transporter permease subunit FeoB — —
Escherichia coli ECOR27 0.68 NOLOHH_09845 greA transcription elongation factor GreA 0.35 NOLOHH_08805 feoB Fe(2+) transporter permease subunit FeoB low > 76
Escherichia coli ECRC62 0.68 BNILDI_01690 greA transcription elongation factor GreA 0.35 BNILDI_02715 feoB Fe(2+) transporter permease subunit FeoB low > 75
Escherichia coli ECRC100 0.68 OKFHMN_18045 greA transcription elongation factor GreA 0.35 OKFHMN_17015 feoB Fe(2+) transporter permease subunit FeoB low > 79
Escherichia fergusonii Becca 0.68 EFB2_00642 Transcription elongation factor GreA 0.35 EFB2_00419 Fe(2+) transporter FeoB low > 86
Escherichia coli ECRC102 0.68 NIAGMN_15805 greA transcription elongation factor GreA 0.35 NIAGMN_14785 feoB Fe(2+) transporter permease subunit FeoB low > 80
Escherichia coli ECRC101 0.68 MCAODC_08565 greA transcription elongation factor GreA 0.35 MCAODC_07545 feoB Fe(2+) transporter permease subunit FeoB low > 88
Escherichia coli ECRC98 0.68 JDDGAC_21670 greA transcription elongation factor GreA 0.35 JDDGAC_20645 feoB Fe(2+) transporter permease subunit FeoB low > 87
Escherichia coli BW25113 0.68 b3181 greA transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) 0.35 b3409 feoB ferrous iron transport protein B (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00519 Transcription elongation factor GreA 0.35 OHPLBJKB_00294 Fe(2+) transporter FeoB low > 74
Escherichia coli Nissle 1917 0.68 ECOLIN_RS18320 transcription elongation factor GreA 0.35 ECOLIN_RS19475 Fe(2+) transporter permease subunit FeoB — —
Escherichia coli ECOR38 0.68 HEPCGN_16920 greA transcription elongation factor GreA 0.36 HEPCGN_15825 feoB ferrous iron transport protein B low > 88
Escherichia coli BL21 0.68 ECD_03046 transcript cleavage factor 0.35 ECD_03261 ferrous iron transporter protein B and GTP-binding protein; membrane protein low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2922 Transcription elongation factor GreA 0.36 GFF609 Ferrous iron transport protein B low > 78
Klebsiella pneumoniae MKP103 0.67 KDGMDA_05975 transcription elongation factor GreA 0.36 KDGMDA_07000 Fe(2+) transporter permease subunit FeoB low > 95
Enterobacter sp. TBS_079 0.66 MPMX20_04085 Transcription elongation factor GreA 0.36 MPMX20_04296 Fe(2+) transporter FeoB low > 85
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3232 transcription elongation factor GreA 0.36 EX28DRAFT_4133 ferrous iron transporter FeoB low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS25160 transcription elongation factor GreA 0.36 BWI76_RS26645 ferrous iron transporter B low > 92
Dickeya dadantii 3937 0.66 DDA3937_RS03015 transcription elongation factor GreA 0.46 DDA3937_RS11525 Fe(2+) transporter permease subunit FeoB — —
Dickeya dianthicola ME23 0.65 DZA65_RS03180 transcription elongation factor GreA 0.45 DZA65_RS11905 Fe(2+) transporter permease subunit FeoB low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS03185 transcription elongation factor GreA 0.45 HGI48_RS11570 Fe(2+) transporter permease subunit FeoB low > 71
Pseudomonas aeruginosa PA14 0.65 IKLFDK_29820 transcription elongation factor GreA 0.40 IKLFDK_02315 Fe(2+) transporter permease subunit FeoB low > 100
Rahnella sp. WP5 0.64 EX31_RS08595 transcription elongation factor GreA 0.39 EX31_RS04850 Fe(2+) transporter permease subunit FeoB low > 89
Pantoea sp. MT58 0.64 IAI47_17080 transcription elongation factor GreA 0.35 IAI47_21535 Fe(2+) transporter permease subunit FeoB low > 76
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS09175 transcription elongation factor GreA 0.36 PagCFBP13505_RS12440 Fe(2+) transporter permease subunit FeoB low > 74
Serratia liquefaciens MT49 0.63 IAI46_01880 transcription elongation factor GreA 0.37 IAI46_23810 Fe(2+) transporter permease subunit FeoB low > 86
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_13865 greA transcription elongation factor GreA 0.37 IJEDHG_11935 feoB Fe(2+) transporter permease subunit FeoB low > 61
Erwinia tracheiphila SCR3 0.58 LU632_RS21165 greA transcription elongation factor GreA 0.37 LU632_RS22965 feoB Fe(2+) transporter permease subunit FeoB low > 74
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_02941 transcription elongation factor greA 0.18 CCNA_00749 ferrous iron transport protein B low > 67
Caulobacter crescentus NA1000 0.56 CCNA_02941 transcription elongation factor greA 0.18 CCNA_00749 ferrous iron transport protein B — —
Methylophilus sp. DMC18 0.53 GFF313 Transcription elongation factor GreA 0.16 GFF811 Fe(2+) transporter FeoB — —
Azospirillum brasilense Sp245 0.50 AZOBR_RS12900 transcription elongation factor GreA 0.17 AZOBR_RS17645 iron transporter FeoB — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_0008 transcription elongation factor GreA 0.16 Ga0059261_2286 Fe2+ transport system protein B — —
Rhodospirillum rubrum S1H 0.49 Rru_A2887 GreA/GreB family elongation factor (NCBI) 0.45 Rru_A2470 Ferrous iron transport protein B (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.49 AMB_RS03610 transcription elongation factor GreA 0.39 AMB_RS13735 Fe(2+) transporter permease subunit FeoB low > 64
Sphingobium sp. HT1-2 0.47 GFF2086 Transcription elongation factor GreA 0.13 GFF3263 Ferrous iron transporter FeoB — —
Desulfovibrio vulgaris Hildenborough JW710 0.46 DVU3245 greA transcription elongation factor GreA (TIGR) 0.20 DVU2571 feoB ferrous iron transport protein B (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_0383 greA transcription elongation factor GreA (RefSeq) 0.18 DvMF_1015 ferrous iron transport protein B (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS04145 transcription elongation factor GreA 0.21 ABI39_RS14480 ferrous iron transport protein B low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS00130 transcription elongation factor GreA 0.18 ABZR88_RS00325 ferrous iron transport protein B — —
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS12565 transcription elongation factor GreA 0.21 HMPREF1058_RS18205 ferrous iron transport protein B — —
Bacteroides thetaiotaomicron VPI-5482 0.34 BT2565 transcription elongation factor greA (NCBI ptt file) 0.21 BT1592 putative ferrous iron transport protein (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.34 BACOVA_01643 prokaryotic transcription elongation factor, GreA/GreB domain protein 0.22 BACOVA_04334 ferrous iron transport protein B — —
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS00805 transcription elongation factor GreA 0.21 HMPREF1181_RS11280 ferrous iron transport protein B — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS17725 transcription elongation factor GreA 0.22 HMPREF1078_RS00055 ferrous iron transport protein B low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_0180 transcription elongation factor GreA 0.17 Echvi_0906 ferrous iron transporter FeoB — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_03870 transcription elongation factor GreA 0.18 CA264_15345 ferrous iron transporter B — —

Not shown: 62 genomes with orthologs for CSW01_03330 only; 2 genomes with orthologs for CSW01_10385 only