Conservation of cofitness between CSW01_12530 and CSW01_10350 in Vibrio cholerae E7946 ATCC 55056

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12530 YecA family protein 1.0 CSW01_10350 flagellar biosynthesis protein FlhA 0.67 19
Erwinia tracheiphila SCR3 0.33 LU632_RS05875 YecA family protein 0.51 LU632_RS13505 flhA flagellar biosynthesis protein FlhA low > 73
Rahnella sp. WP5 0.33 EX31_RS21490 YecA family protein 0.50 EX31_RS11340 flagellar biosynthesis protein FlhA low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3010 UPF0149 exported protein YgfB 0.49 GFF1660 Flagellar biosynthesis protein FlhA low > 78
Serratia liquefaciens MT49 0.32 IAI46_20880 YecA family protein 0.51 IAI46_15995 flagellar biosynthesis protein FlhA low > 87
Dickeya dadantii 3937 0.32 DDA3937_RS02400 YecA family protein 0.53 DDA3937_RS13505 flagellar biosynthesis protein FlhA 0.43 62
Enterobacter asburiae PDN3 0.31 EX28DRAFT_2961 yecA family protein 0.48 EX28DRAFT_0681 flagellar biosynthesis protein FlhA low > 76
Dickeya dianthicola 67-19 0.31 HGI48_RS02355 YecA family protein 0.53 HGI48_RS13550 flagellar biosynthesis protein FlhA low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS02460 YecA family protein 0.53 DZA65_RS14035 flagellar biosynthesis protein FlhA low > 75
Enterobacter sp. TBS_079 0.31 MPMX20_03768 hypothetical protein 0.48 MPMX20_02783 Flagellar biosynthesis protein FlhA low > 85
Pectobacterium carotovorum WPP14 0.31 HER17_RS19110 YecA family protein 0.52 HER17_RS08140 flagellar biosynthesis protein FlhA low > 75
Erwinia tracheiphila HP pepo 2.2 0.30 IJEDHG_03295 YecA family protein 0.51 IJEDHG_22040 flhA flagellar biosynthesis protein FlhA low > 61
Escherichia coli ECOR38 0.29 HEPCGN_18790 ygfB UPF0149 family protein YgfB 0.50 HEPCGN_04590 flhA flagellar biosynthesis protein FlhA low > 88
Escherichia coli ECOR27 0.29 NOLOHH_11410 ygfB UPF0149 family protein YgfB 0.50 NOLOHH_16610 flhA flagellar biosynthesis protein FlhA 0.74 17
Escherichia coli BW25113 0.29 b2909 ygfB orf, hypothetical protein (VIMSS) 0.51 b1879 flhA flagellar biosynthesis protein A (NCBI) low > 76
Escherichia coli ECRC62 0.29 BNILDI_09945 ygfB UPF0149 family protein YgfB 0.50 BNILDI_15400 flhA flagellar biosynthesis protein FlhA low > 75
Escherichia coli Nissle 1917 0.29 ECOLIN_RS16195 UPF0149 family protein YgfB 0.50 ECOLIN_RS10735 flagellar biosynthesis protein FlhA — —
Escherichia coli ECRC102 0.29 NIAGMN_17265 ygfB UPF0149 family protein YgfB 0.49 NIAGMN_01890 flhA flagellar biosynthesis protein FlhA low > 80
Escherichia fergusonii Becca 0.29 EFB2_00993 hypothetical protein 0.49 EFB2_02064 Flagellar biosynthesis protein FlhA low > 86
Escherichia coli ECRC99 0.29 KEDOAH_08640 ygfB UPF0149 family protein YgfB 0.49 KEDOAH_01935 flhA flagellar biosynthesis protein FlhA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_00806 hypothetical protein 0.49 OHPLBJKB_01849 Flagellar biosynthesis protein FlhA low > 74
Escherichia coli ECRC101 0.29 MCAODC_10020 ygfB UPF0149 family protein YgfB 0.49 MCAODC_19235 flhA flagellar biosynthesis protein FlhA low > 87
Escherichia coli ECRC98 0.29 JDDGAC_23140 ygfB UPF0149 family protein YgfB 0.49 JDDGAC_00745 flhA flagellar biosynthesis protein FlhA low > 87
Escherichia coli BL21 0.29 ECD_02741 UPF0149 family protein 0.49 ECD_01850 putative flagellar export pore protein low > 61
Escherichia coli ECRC100 0.29 OKFHMN_19500 ygfB UPF0149 family protein YgfB 0.49 OKFHMN_26170 flhA flagellar biosynthesis protein FlhA 0.70 25
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS15955 YecA family protein 0.51 PagCFBP13505_RS02230 flagellar biosynthesis protein FlhA low > 74
Pantoea sp. MT58 0.27 IAI47_03745 YecA family protein 0.51 IAI47_08350 flagellar biosynthesis protein FlhA low > 76
Erwinia amylovora T8 0.27 OLJFJH_08755 YecA family protein 0.51 OLJFJH_12780 flagellar biosynthesis protein FlhA 0.48 35
Shewanella loihica PV-4 0.23 Shew_3067 yecA family protein (RefSeq) 0.72 Shew_1380 flhA flagellar biosynthesis protein FlhA (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.22 MIT1002_02985 yecA family protein 0.68 MIT1002_01100 Flagellar biosynthesis protein FlhA low > 70
Shewanella sp. ANA-3 0.19 Shewana3_3504 yecA family protein (RefSeq) 0.71 Shewana3_1356 flhA flagellar biosynthesis protein FlhA (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.1146.1 FIG001590: Putative conserved exported protein precursor 0.54 Xcc-8004.2828.1 Flagellar biosynthesis protein FlhA — —
Lysobacter sp. OAE881 0.19 ABIE51_RS17325 UPF0149 family protein 0.55 ABIE51_RS16850 flagellar biosynthesis protein FlhA low > 62
Pseudomonas aeruginosa MRSN321 0.18 DY961_RS11995 YecA family protein 0.62 DY961_RS05650 flhA;go_component=bacterial-type flagellar biosynthesis protein FlhA low > 100
Pseudomonas aeruginosa PUPa3 0.18 DQ20_RS50120 YecA family protein 0.62 DQ20_RS47140 flhA;go_component=bacterial-type flagellar biosynthesis protein FlhA low > 101
Shewanella amazonensis SB2B 0.18 Sama_2724 YgfB and YecA (RefSeq) 0.71 Sama_2283 flhA flagellar biosynthesis protein FlhA (RefSeq) low > 62
Pseudomonas sp. SVBP6 0.17 COO64_RS00995 YecA family protein 0.61 COO64_RS25610 flhA flagellar biosynthesis protein FlhA low > 93
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_2228 FIG001590: Putative conserved exported protein precursor 0.60 Pf1N1B4_3622 Flagellar biosynthesis protein FlhA low > 87
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_895 FIG001590: Putative conserved exported protein precursor 0.60 PfGW456L13_4334 Flagellar biosynthesis protein FlhA low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_0320 Protein of unknown function UPF0149 0.60 Psyr_3440 Flagellar biosynthesis protein FlhA low > 86
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_0320 Protein of unknown function UPF0149 0.60 Psyr_3440 Flagellar biosynthesis protein FlhA low > 86
Shewanella oneidensis MR-1 0.16 SO0776 conserved hypothetical protein (NCBI ptt file) 0.68 SO3213 flhA flagellar biosynthesis protein FlhA (NCBI ptt file) low > 76
Pseudomonas sp. RS175 0.16 PFR28_04322 hypothetical protein 0.61 PFR28_00849 Flagellar biosynthesis protein FlhA low > 88
Pseudomonas aeruginosa PA14 0.16 IKLFDK_27345 UPF0149 protein PSPA7_5968 0.62 IKLFDK_06905 flagellar biosynthesis protein FlhA low > 98
Pseudomonas segetis P6 0.16 MPMX49_04488 hypothetical protein 0.60 MPMX49_03130 Flagellar biosynthesis protein FlhA 0.57 46
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_13005 hypothetical protein 0.61 AO356_03745 flagellar biosynthesis protein FlhA low > 104
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_4479 FIG001590: Putative conserved exported protein precursor 0.60 Pf6N2E2_2576 Flagellar biosynthesis protein FlhA low > 103
Marinobacter adhaerens HP15 0.15 HP15_3204 yecA family protein 0.57 HP15_2305 flagellar biosynthesis protein A low > 73
Pseudomonas sp. S08-1 0.15 OH686_11210 Putative conserved exported protein precursor 0.61 OH686_02745 flagellar biosynthesis protein FlhA low > 80
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_08765 hypothetical protein 0.60 AO353_18770 flagellar biosynthesis protein FlhA low > 101
Pseudomonas stutzeri RCH2 0.14 Psest_0174 Uncharacterized protein conserved in bacteria 0.62 Psest_1737 flagellar biosynthesis protein FlhA low > 67
Pseudomonas fluorescens SBW25 0.14 PFLU_RS28950 YecA family protein 0.59 PFLU_RS21675 flagellar biosynthesis protein FlhA low > 109
Pseudomonas lactucae CFBP13502 0.14 GEMAOFIL_05596 hypothetical protein 0.58 GEMAOFIL_04141 Flagellar biosynthesis protein FlhA low > 96
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS28950 YecA family protein 0.59 PFLU_RS21675 flagellar biosynthesis protein FlhA low > 109
Pseudomonas simiae WCS417 0.14 PS417_27290 hypothetical protein 0.58 PS417_19710 flagellar biosynthesis protein FlhA low > 88
Pseudomonas orientalis W4I3 0.13 QF045_RS01660 YecA family protein 0.58 QF045_RS21850 flagellar biosynthesis protein FlhA low > 93
Pseudomonas sp. DMC3 0.13 GFF317 hypothetical protein 0.60 GFF2469 Flagellar biosynthesis protein FlhA low > 89

Not shown: 3 genomes with orthologs for CSW01_12530 only; 43 genomes with orthologs for CSW01_10350 only