Conservation of cofitness between CSW01_10080 and CSW01_10270 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10080 4-amino-4-deoxychorismate lyase 1.0 CSW01_10270 cytochrome c-type biogenesis protein CcmE 0.79 3
Escherichia coli ECRC102 0.33 NIAGMN_24270 pabC aminodeoxychorismate lyase 0.58 NIAGMN_21065 ccmE cytochrome c maturation protein CcmE — —
Escherichia coli ECRC101 0.33 MCAODC_22920 pabC aminodeoxychorismate lyase 0.58 MCAODC_14350 ccmE cytochrome c maturation protein CcmE low > 87
Escherichia coli ECRC100 0.33 OKFHMN_03560 pabC aminodeoxychorismate lyase 0.58 OKFHMN_23300 ccmE cytochrome c maturation protein CcmE low > 80
Serratia liquefaciens MT49 0.33 IAI46_09805 aminodeoxychorismate lyase 0.57 IAI46_18090 cytochrome c maturation protein CcmE low > 86
Escherichia coli ECRC99 0.33 KEDOAH_24195 pabC aminodeoxychorismate lyase 0.58 KEDOAH_04885 ccmE cytochrome c maturation protein CcmE — —
Escherichia coli ECRC98 0.33 JDDGAC_07220 pabC aminodeoxychorismate lyase 0.58 JDDGAC_27260 ccmE cytochrome c maturation protein CcmE low > 86
Escherichia coli BW25113 0.33 b1096 pabC 4-amino-4-deoxychorismate lyase (NCBI) 0.58 b2197 ccmE periplasmic heme chaperone (NCBI) low > 76
Escherichia fergusonii Becca 0.33 EFB2_02879 Aminodeoxychorismate lyase 0.58 EFB2_01659 Cytochrome c-type biogenesis protein CcmE low > 86
Escherichia coli ECRC62 0.33 BNILDI_19250 pabC aminodeoxychorismate lyase 0.58 BNILDI_13795 ccmE cytochrome c maturation protein CcmE low > 75
Escherichia coli ECOR27 0.33 NOLOHH_21090 pabC aminodeoxychorismate lyase 0.58 NOLOHH_14875 ccmE cytochrome c maturation protein CcmE — —
Escherichia coli Nissle 1917 0.33 ECOLIN_RS06330 aminodeoxychorismate lyase 0.58 ECOLIN_RS12840 cytochrome c maturation protein CcmE — —
Pectobacterium carotovorum WPP14 0.33 HER17_RS08665 aminodeoxychorismate lyase 0.53 HER17_RS09050 cytochrome c maturation protein CcmE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_02570 Aminodeoxychorismate lyase 0.58 OHPLBJKB_01514 Cytochrome c-type biogenesis protein CcmE low > 73
Escherichia coli BL21 0.33 ECD_01092 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex 0.58 ECD_02124 periplasmic heme chaperone — —
Escherichia coli ECOR38 0.32 HEPCGN_23920 pabC aminodeoxychorismate lyase 0.58 HEPCGN_22565 ccmE cytochrome c maturation protein CcmE low > 87
Erwinia amylovora T8 0.32 OLJFJH_15515 aminodeoxychorismate lyase 0.54 OLJFJH_11095 cytochrome c maturation protein CcmE low > 58
Rahnella sp. WP5 0.30 EX31_RS24450 aminodeoxychorismate lyase 0.58 EX31_RS19750 cytochrome c maturation protein CcmE low > 89
Pantoea sp. MT58 0.30 IAI47_12055 aminodeoxychorismate lyase 0.48 IAI47_06085 cytochrome c maturation protein CcmE low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3378 Aminodeoxychorismate lyase (EC 4.1.3.38) 0.56 GFF4878 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Alteromonas macleodii MIT1002 0.29 MIT1002_01736 Aminodeoxychorismate lyase 0.62 MIT1002_00964 Heme chaperone CcmE — —
Shewanella oneidensis MR-1 0.29 SO2615 pabC 4-amino-4-deoxychorismate lyase (NCBI ptt file) 0.62 SO0259 ccmE cytochrome c biogenesis protein CcmE (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.28 Shewana3_1764 aminodeoxychorismate lyase apoprotein (RefSeq) 0.63 Shewana3_0227 cytochrome c-type biogenesis protein CcmE (RefSeq) — —
Pseudomonas sp. S08-1 0.28 OH686_22155 aminodeoxychorismate lyase 0.47 OH686_02640 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Rhodanobacter sp000427505 FW510-R12 0.28 LRK53_RS08905 aminodeoxychorismate lyase 0.32 LRK53_RS12725 cytochrome c maturation protein CcmE — —
Pseudomonas aeruginosa PA14 0.28 IKLFDK_15080 aminodeoxychorismate lyase 0.45 IKLFDK_07035 cytochrome c maturation protein CcmE — —
Pseudomonas stutzeri RCH2 0.27 Psest_1691 aminodeoxychorismate lyase 0.48 Psest_1758 Cytochrome c-type biogenesis protein CcmE — —
Rhodanobacter denitrificans MT42 0.26 LRK55_RS00940 aminodeoxychorismate lyase 0.32 LRK55_RS15820 cytochrome c maturation protein CcmE — —
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_20180 4-amino-4-deoxychorismate lyase 0.47 AO356_03640 cytochrome C biogenesis protein CcmE — —
Pseudomonas sp. DMC3 0.26 GFF4754 Aminodeoxychorismate lyase 0.44 GFF2489 Cytochrome c-type biogenesis protein CcmE — —
Shewanella loihica PV-4 0.26 Shew_1577 aminotransferase, class IV (RefSeq) 0.64 Shew_0186 cytochrome c-type biogenesis protein CcmE (RefSeq) — —
Pseudomonas sp. RS175 0.26 PFR28_03007 Aminodeoxychorismate lyase 0.47 PFR28_00869 Cytochrome c-type biogenesis protein CcmE — —
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS01165 aminodeoxychorismate lyase 0.32 LRK54_RS16070 cytochrome c maturation protein CcmE — —
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_2108 Aminodeoxychorismate lyase (EC 4.1.3.38) 0.46 PfGW456L13_4312 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Pseudomonas fluorescens SBW25 0.26 PFLU_RS23040 aminodeoxychorismate lyase 0.46 PFLU_RS08665 cytochrome c maturation protein CcmE low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS23040 aminodeoxychorismate lyase 0.46 PFLU_RS08665 cytochrome c maturation protein CcmE low > 109
Rhodanobacter sp. FW510-T8 0.25 OKGIIK_05735 pabC aminodeoxychorismate lyase 0.35 OKGIIK_08580 ccmE cytochrome c maturation protein CcmE — —
Pseudomonas simiae WCS417 0.25 PS417_21425 4-amino-4-deoxychorismate lyase 0.46 PS417_08710 cytochrome C biogenesis protein CcmE — —
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_5955 Aminodeoxychorismate lyase (EC 4.1.3.38) 0.46 Pf6N2E2_2556 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_1650 aminodeoxychorismate lyase apoprotein 0.44 Psyr_3389 CcmE/CycJ protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_1650 aminodeoxychorismate lyase apoprotein 0.44 Psyr_3389 CcmE/CycJ protein — —
Pseudomonas sp. SVBP6 0.25 COO64_RS05790 pabC aminodeoxychorismate lyase 0.45 COO64_RS25710 ccmE cytochrome c maturation protein CcmE — —
Lysobacter sp. OAE881 0.25 ABIE51_RS13925 aminodeoxychorismate lyase 0.37 ABIE51_RS08705 cytochrome c maturation protein CcmE low > 62
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_448 Aminodeoxychorismate lyase (EC 4.1.3.38) 0.46 Pf1N1B4_3643 Cytochrome c-type biogenesis protein CcmE, heme chaperone — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS06150 aminodeoxychorismate lyase 0.38 ABZR86_RS06440 cytochrome c maturation protein CcmE — —
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_01350 4-amino-4-deoxychorismate lyase 0.46 AO353_18870 cytochrome C biogenesis protein CcmE — —
Pseudomonas putida KT2440 0.23 PP_1917 4-amino-4-deoxychorismate lyase 0.40 PP_4323 Cytochrome c-type biogenesis protein CcmE — —
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1750 aminodeoxychorismate lyase 0.45 B158DRAFT_1327 Cytochrome c-type biogenesis protein CcmE low > 40
Xanthobacter sp. DMC5 0.19 GFF438 D-alanine aminotransferase 0.34 GFF1778 Cytochrome c-type biogenesis protein CcmE — —
Azospirillum sp. SherDot2 0.17 MPMX19_04995 D-alanine aminotransferase 0.35 MPMX19_02532 Cytochrome c-type biogenesis protein CcmE low > 112
Marinobacter adhaerens HP15 0.17 HP15_2209 4-amino-4-deoxychorismate lyase 0.47 HP15_2282 cytochrome c-type biogenesis protein CcmE — —
Caulobacter crescentus NA1000 0.16 CCNA_03047 4-amino-4-deoxychorismate lyase 0.33 CCNA_02849 cytochrome c-type biogenesis heme chaperone low > 66
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_03047 4-amino-4-deoxychorismate lyase 0.33 CCNA_02849 cytochrome c-type biogenesis heme chaperone low > 67
Agrobacterium fabrum C58 0.13 Atu5473 D-alanine aminotransferase 0.33 Atu0974 cytochrome-c biosynthesis heme-carrier protein cycJ — —

Not shown: 14 genomes with orthologs for CSW01_10080 only; 13 genomes with orthologs for CSW01_10270 only