Conservation of cofitness between CSW01_02420 and CSW01_10220 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02420 glutaminase 1.0 CSW01_10220 DNA topoisomerase III 0.60 4
Serratia liquefaciens MT49 0.70 IAI46_21450 glutaminase B 0.55 IAI46_14305 DNA topoisomerase III low > 87
Rahnella sp. WP5 0.69 EX31_RS02720 glutaminase B 0.56 EX31_RS06315 DNA topoisomerase III low > 89
Shewanella loihica PV-4 0.69 Shew_1126 glutaminase (RefSeq) 0.55 Shew_2299 DNA topoisomerase III (RefSeq) low > 60
Shewanella amazonensis SB2B 0.68 Sama_2487 Glutaminase (EC 3.5.1.2) (from data) 0.54 Sama_2145 DNA topoisomerase III (RefSeq) low > 62
Escherichia coli BL21 0.67 ECD_01481 glutaminase 2 0.57 ECD_01732 DNA topoisomerase III low > 61
Escherichia coli BW25113 0.67 b1524 yneH predicted glutaminase (NCBI) 0.57 b1763 topB DNA topoisomerase III (NCBI) low > 76
Escherichia coli ECRC99 0.67 KEDOAH_27315 glsB glutaminase B 0.57 KEDOAH_01280 topB DNA topoisomerase III — —
Escherichia coli ECOR27 0.67 NOLOHH_18765 glsB glutaminase B 0.57 NOLOHH_17340 topB DNA topoisomerase III low > 76
Klebsiella pneumoniae MKP103 0.67 KDGMDA_21590 glutaminase B 0.56 KDGMDA_19285 DNA topoisomerase III low > 95
Escherichia coli Nissle 1917 0.67 ECOLIN_RS08705 glutaminase B 0.57 ECOLIN_RS09830 DNA topoisomerase III — —
Escherichia coli ECRC98 0.67 JDDGAC_03625 glsB glutaminase B 0.57 JDDGAC_01405 topB DNA topoisomerase III 0.41 42
Escherichia fergusonii Becca 0.67 EFB2_02436 Glutaminase 2 0.57 EFB2_02231 DNA topoisomerase 3 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02195 Glutaminase 2 0.57 OHPLBJKB_01969 DNA topoisomerase 3 low > 74
Escherichia coli ECRC100 0.67 OKFHMN_01115 glsB glutaminase B 0.57 OKFHMN_26830 topB DNA topoisomerase III — —
Escherichia coli ECRC101 0.67 MCAODC_16810 glsB glutaminase B 0.57 MCAODC_18580 topB DNA topoisomerase III low > 87
Escherichia coli ECOR38 0.67 HEPCGN_26645 glsB glutaminase B 0.57 HEPCGN_05200 topB DNA topoisomerase III low > 88
Escherichia coli ECRC102 0.67 NIAGMN_25260 glsB glutaminase B 0.57 NIAGMN_01235 topB DNA topoisomerase III 0.53 59
Escherichia coli ECRC62 0.67 BNILDI_17245 glsB glutaminase B 0.57 BNILDI_16125 topB DNA topoisomerase III low > 75
Klebsiella michiganensis M5al 0.67 BWI76_RS15200 glutaminase 0.56 BWI76_RS11605 DNA topoisomerase III low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2512 Glutaminase (EC 3.5.1.2) 0.56 GFF3486 DNA topoisomerase III (EC 5.99.1.2) low > 78
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1196 L-glutaminase (EC 3.5.1.2) 0.56 EX28DRAFT_1764 DNA topoisomerase III, bacteria and conjugative plasmid low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_02271 Glutaminase 2 0.55 MPMX20_01853 DNA topoisomerase 3 low > 85
Shewanella sp. ANA-3 0.64 Shewana3_1184 Glutaminase (EC 3.5.1.2) (from data) 0.54 Shewana3_1486 DNA topoisomerase III (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO3365 glsA Glutaminase (EC 3.5.1.2) (from data) 0.54 SO3061 topB DNA topoisomerase III (NCBI ptt file) low > 76
Pantoea sp. MT58 0.62 IAI47_20610 glutaminase B 0.56 IAI47_08980 DNA topoisomerase III low > 76
Pantoea agglomerans CFBP13505 P0401 0.62 PagCFBP13505_RS14195 glutaminase B 0.56 PagCFBP13505_RS02815 DNA topoisomerase III low > 74
Pseudomonas sp. SVBP6 0.60 COO64_RS07985 glsB glutaminase B 0.32 COO64_RS23235 DNA topoisomerase III low > 93
Pseudomonas lactucae CFBP13502 0.58 GEMAOFIL_03498 Glutaminase 2 0.33 GEMAOFIL_02205 DNA topoisomerase 3 low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_2292 L-glutaminase 0.34 Psyr_2244 DNA topoisomerase III low > 86
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_2292 L-glutaminase 0.34 Psyr_2244 DNA topoisomerase III low > 86
Pseudomonas simiae WCS417 0.58 PS417_15505 glutaminase 0.33 PS417_10550 DNA topoisomerase III low > 88
Pseudomonas orientalis W4I3 0.58 QF045_RS17545 glutaminase B 0.32 QF045_RS12525 DNA topoisomerase III low > 93
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS17490 glutaminase B 0.33 PFLU_RS10610 DNA topoisomerase III low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS17490 glutaminase B 0.33 PFLU_RS10610 DNA topoisomerase III low > 109
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_26790 Glutaminase (EC 3.5.1.2) (from data) 0.33 AO353_26780 DNA topoisomerase III low > 101
Pseudomonas stutzeri RCH2 0.56 Psest_4081 Glutaminase (EC 3.5.1.2) (from data) 0.34 Psest_1383 DNA topoisomerase III, bacteria and conjugative plasmid low > 67
Pseudomonas sp. DMC3 0.56 GFF1705 Glutaminase 2 0.32 GFF1711 DNA topoisomerase 3 low > 89
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2102 Glutaminase (EC 3.5.1.2) (from data) 0.33 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster low > 103
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4436 Glutaminase (EC 3.5.1.2) 0.33 Pf1N1B4_4446 DNA topoisomerase III (EC 5.99.1.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_21690 Glutaminase (EC 3.5.1.2) (from data) 0.33 AO356_21700 DNA topoisomerase III low > 104
Pseudomonas sp. RS175 0.55 PFR28_01340 Glutaminase 2 0.33 PFR28_01342 DNA topoisomerase 3 low > 88
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS27580 glutaminase 0.28 RR42_RS24470 hypothetical protein low > 128
Phocaeicola vulgatus CL09T03C04 0.49 HMPREF1058_RS12480 glutaminase 0.23 HMPREF1058_RS14305 DNA topoisomerase 3 low > 67
Phocaeicola dorei CL03T12C01 0.49 ABI39_RS04255 glutaminase 0.23 ABI39_RS09935 DNA topoisomerase 3 low > 72
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS10705 glutaminase A 0.23 HMPREF1181_RS08375 DNA topoisomerase 3 — —
Bacteroides thetaiotaomicron VPI-5482 0.25 BT2571 putative glutaminase (NCBI ptt file) 0.23 BT2089 DNA topoisomerase III (NCBI ptt file) — —
Parabacteroides merdae CL09T00C40 0.24 HMPREF1078_RS06390 glutaminase A 0.24 HMPREF1078_RS01110 DNA topoisomerase 3 low > 61
Bacteroides ovatus ATCC 8483 0.24 BACOVA_00112 glutaminase A 0.22 BACOVA_03290 DNA topoisomerase low > 96

Not shown: 31 genomes with orthologs for CSW01_02420 only; 15 genomes with orthologs for CSW01_10220 only