Conservation of cofitness between CSW01_04375 and CSW01_10190 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04375 SsrA-binding protein 1.0 CSW01_10190 nucleoid-associated protein 0.58 3
Escherichia coli Nissle 1917 0.72 ECOLIN_RS14795 SsrA-binding protein SmpB 0.52 ECOLIN_RS12775 nucleoid-associated protein YejK — —
Escherichia fergusonii Becca 0.72 EFB2_01273 SsrA-binding protein 0.52 EFB2_01670 Nucleoid-associated protein YejK low > 86
Escherichia coli ECRC99 0.72 KEDOAH_07095 smpB SsrA-binding protein SmpB 0.52 KEDOAH_04840 yejK nucleoid-associated protein YejK — —
Escherichia coli ECOR38 0.72 HEPCGN_20245 smpB SsrA-binding protein SmpB 0.52 HEPCGN_22610 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC62 0.72 BNILDI_11600 smpB SsrA-binding protein SmpB 0.52 BNILDI_13840 yejK nucleoid-associated protein YejK low > 75
Escherichia coli ECRC101 0.72 MCAODC_11650 smpB SsrA-binding protein SmpB 0.52 MCAODC_14395 yejK nucleoid-associated protein YejK — —
Escherichia coli BL21 0.72 ECD_02508 tmRNA-binding trans-translation protein 0.52 ECD_02116 spermidine nucleoid-associated protein low > 61
Escherichia coli ECRC100 0.72 OKFHMN_21125 smpB SsrA-binding protein SmpB 0.52 OKFHMN_23345 yejK nucleoid-associated protein YejK — —
Escherichia coli ECRC102 0.72 NIAGMN_18895 smpB SsrA-binding protein SmpB 0.52 NIAGMN_21110 yejK nucleoid-associated protein YejK — —
Escherichia coli BW25113 0.72 b2620 smpB SsrA-binding protein (NCBI) 0.52 b2186 yejK nucleoid-associated protein NdpA (NCBI) low > 76
Escherichia coli ECRC98 0.72 JDDGAC_24790 smpB SsrA-binding protein SmpB 0.52 JDDGAC_27305 yejK nucleoid-associated protein YejK low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01087 SsrA-binding protein 0.52 OHPLBJKB_01523 Nucleoid-associated protein YejK low > 74
Escherichia coli ECOR27 0.72 NOLOHH_12795 smpB SsrA-binding protein SmpB 0.52 NOLOHH_14920 yejK nucleoid-associated protein YejK — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF4158 tmRNA-binding protein SmpB 0.53 GFF3749 Nucleoid-associated protein NdpA low > 78
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2723 SsrA-binding protein 0.53 EX28DRAFT_0375 Nucleoid-associated protein low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_03490 SsrA-binding protein 0.52 MPMX20_03152 Nucleoid-associated protein YejK low > 85
Dickeya dadantii 3937 0.70 DDA3937_RS04305 SsrA-binding protein SmpB 0.54 DDA3937_RS09125 nucleoid-associated protein YejK — —
Klebsiella pneumoniae MKP103 0.70 KDGMDA_02270 SsrA-binding protein SmpB 0.53 KDGMDA_26785 nucleoid-associated protein YejK low > 95
Dickeya dianthicola 67-19 0.70 HGI48_RS04300 SsrA-binding protein SmpB 0.53 HGI48_RS09165 nucleoid-associated protein YejK low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS04215 SsrA-binding protein SmpB 0.54 DZA65_RS09465 nucleoid-associated protein YejK low > 75
Klebsiella michiganensis M5al 0.69 BWI76_RS21580 SsrA-binding protein 0.53 BWI76_RS19835 nucleoid-associated protein YejK low > 92
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS14680 SsrA-binding protein SmpB 0.55 PagCFBP13505_RS00655 nucleoid-associated protein YejK — —
Pantoea sp. MT58 0.68 IAI47_04790 SsrA-binding protein SmpB 0.55 IAI47_06570 nucleoid-associated protein YejK — —
Rahnella sp. WP5 0.68 EX31_RS21740 SsrA-binding protein SmpB 0.55 EX31_RS19210 nucleoid-associated protein YejK — —
Erwinia tracheiphila HP pepo 2.2 0.68 IJEDHG_26965 smpB SsrA-binding protein SmpB 0.52 IJEDHG_16020 yejK nucleoid-associated protein YejK — —
Erwinia tracheiphila SCR3 0.68 LU632_RS17025 smpB SsrA-binding protein SmpB 0.52 LU632_RS17610 yejK nucleoid-associated protein YejK — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS17440 SsrA-binding protein SmpB 0.54 HER17_RS12975 nucleoid-associated protein YejK low > 75
Erwinia amylovora T8 0.67 OLJFJH_10155 SsrA-binding protein SmpB 0.54 OLJFJH_11695 nucleoid-associated protein YejK — —
Serratia liquefaciens MT49 0.63 IAI46_19655 SsrA-binding protein SmpB 0.53 IAI46_17360 nucleoid-associated protein YejK low > 87
Alteromonas macleodii MIT1002 0.59 MIT1002_01806 Small protein B 0.33 MIT1002_01983 Nucleoid-associated protein YejK — —
Shewanella sp. ANA-3 0.57 Shewana3_2952 smpB SsrA-binding protein (RefSeq) 0.44 Shewana3_2426 nucleoid-associated protein NdpA (RefSeq) — —
Shewanella oneidensis MR-1 0.57 SO1473 smpB SsrA-binding protein (NCBI ptt file) 0.44 SO2177 conserved hypothetical protein (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.55 Sama_2388 smpB SsrA-binding protein (RefSeq) 0.42 Sama_1557 nucleoid-associated protein NdpA (RefSeq) — —
Shewanella loihica PV-4 0.55 Shew_1268 smpB SsrA-binding protein (RefSeq) 0.41 Shew_1472 nucleoid-associated protein NdpA (RefSeq) — —
Marinobacter adhaerens HP15 0.55 HP15_3090 SsrA-binding protein 0.17 HP15_2464 nucleoid-associated protein NdpA — —
Pseudomonas sp. S08-1 0.53 OH686_17025 SsrA-binding protein 0.30 OH686_17845 Nucleoid-associated protein NdpA low > 80
Pseudomonas sp. SVBP6 0.52 COO64_RS15300 smpB SsrA-binding protein SmpB 0.29 COO64_RS04385 yejK nucleoid-associated protein YejK low > 93
Pseudomonas stutzeri RCH2 0.52 Psest_0957 SsrA-binding protein 0.29 Psest_1222 Nucleoid-associated protein — —
Pseudomonas sp. BP01 0.52 JOY50_RS26715 smpB SsrA-binding protein SmpB 0.28 JOY50_RS11235 yejK nucleoid-associated protein YejK 0.47 84
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_05690 SsrA-binding protein 0.30 AO353_04565 nucleoid-associated protein low > 101
Pseudomonas aeruginosa PUPa3 0.51 DQ20_RS52440 smpB;go_function=RNA SsrA-binding protein SmpB 0.29 DQ20_RS48915 yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES nucleoid-associated protein YejK low > 101
Pseudomonas segetis P6 0.51 MPMX49_01175 SsrA-binding protein 0.28 MPMX49_03541 Nucleoid-associated protein YejK — —
Pseudomonas aeruginosa PA14 0.51 IKLFDK_29750 SsrA-binding protein SmpB 0.29 IKLFDK_01290 nucleoid-associated protein YejK — —
Pseudomonas aeruginosa MRSN321 0.51 DY961_RS09600 smpB;go_function=RNA SsrA-binding protein SmpB 0.29 DY961_RS13625 yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES nucleoid-associated protein YejK low > 100
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_07540 SsrA-binding protein 0.30 AO356_17440 nucleoid-associated protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_3378 tmRNA-binding protein SmpB 0.30 Pf6N2E2_5414 Nucleoid-associated protein — —
Pseudomonas putida KT2440 0.51 PP_4733 SsrA-binding protein 0.28 PP_0973 Nucleoid-associated protein PP_0973 — —
Pseudomonas sp. RS175 0.50 PFR28_00065 SsrA-binding protein 0.30 PFR28_03534 Nucleoid-associated protein YejK — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_4203 SsrA-binding protein 0.29 Psyr_1083 37kDa nucleoid-associated bacterial protein low > 86
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_4203 SsrA-binding protein 0.29 Psyr_1083 37kDa nucleoid-associated bacterial protein low > 86
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_1184 tmRNA-binding protein SmpB 0.30 Pf1N1B4_905 Nucleoid-associated protein — —
Pseudomonas sp. DMC3 0.48 GFF4965 SsrA-binding protein 0.30 GFF1946 Nucleoid-associated protein YejK low > 89
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_5112 tmRNA-binding protein SmpB 0.30 PfGW456L13_1708 Nucleoid-associated protein low > 87
Pseudomonas simiae WCS417 0.47 PS417_24095 SsrA-binding protein 0.30 PS417_05135 nucleoid-associated protein — —
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_04969 SsrA-binding protein 0.30 GEMAOFIL_01233 Nucleoid-associated protein YejK — —
Pseudomonas orientalis W4I3 0.47 QF045_RS26350 SsrA-binding protein SmpB 0.30 QF045_RS08125 nucleoid-associated protein YejK low > 93
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.30 PFLU_RS05205 nucleoid-associated protein YejK — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS25935 SsrA-binding protein SmpB 0.30 PFLU_RS05205 nucleoid-associated protein YejK low > 109
Sphingobium sp. HT1-2 0.40 GFF3116 tmRNA-binding protein SmpB 0.11 GFF4576 nucleoid-associated protein NdpA — —

Not shown: 62 genomes with orthologs for CSW01_04375 only; 0 genomes with orthologs for CSW01_10190 only