Conservation of cofitness between CSW01_14565 and CSW01_09835 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14565 type VI secretion system baseplate subunit TssF 1.0 CSW01_09835 benzoate transporter 0.44 16
Marinobacter adhaerens HP15 0.62 HP15_3473 type VI secretion system, VCA0110 0.16 HP15_1094 benzoate membrane transport protein low > 73
Pectobacterium carotovorum WPP14 0.52 HER17_RS04855 type VI secretion system baseplate subunit TssF 0.35 HER17_RS21705 benzoate/H(+) symporter BenE family transporter low > 75
Pseudomonas putida KT2440 0.48 PP_2621 conserved protein of unknown function 0.34 PP_1820 Benzoate transport protein low > 96
Escherichia coli ECOR27 0.42 NOLOHH_02230 tssF Type VI secretion system protein TssF 0.33 NOLOHH_19285 ydcO BenE family transporter YdcO low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03430 hypothetical protein 0.33 OHPLBJKB_02282 Inner membrane protein YdcO low > 74
Escherichia coli ECRC98 0.42 JDDGAC_13470 tssF Type VI secretion system protein TssF 0.33 JDDGAC_04100 ydcO BenE family transporter YdcO low > 87
Escherichia coli ECRC99 0.42 KEDOAH_18280 tssF Type VI secretion system protein TssF 0.33 KEDOAH_26830 ydcO BenE family transporter YdcO — —
Escherichia coli ECRC102 0.42 NIAGMN_07720 tssF Type VI secretion system protein TssF 0.33 NIAGMN_25745 ydcO BenE family transporter YdcO — —
Escherichia coli ECRC100 0.41 OKFHMN_09870 tssF Type VI secretion system protein TssF 0.33 OKFHMN_01610 ydcO BenE family transporter YdcO low > 79
Pseudomonas segetis P6 0.39 MPMX49_00135 hypothetical protein 0.31 MPMX49_02289 Inner membrane protein YdcO low > 75
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2086 Protein ImpG/VasA 0.34 Pf1N1B4_819 Benzoate transport protein low > 87
Pseudomonas sp. DMC3 0.37 GFF454 hypothetical protein 0.33 GFF691 Inner membrane protein YdcO low > 89
Pseudomonas sp. S08-1 0.36 OH686_12825 T6SS component TssF (ImpG/VasA) 0.34 OH686_00595 Benzoate transport protein low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_09425 type VI secretion protein 0.34 AO353_29330 benzoate transporter low > 101
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS19965 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.32 DY961_RS19915 benzoate/H(+) symporter BenE family transporter low > 100
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS54060 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.32 DQ20_RS54015 benzoate/H(+) symporter BenE family transporter low > 101
Pseudomonas aeruginosa PA14 0.36 IKLFDK_07995 Protein ImpG/VasA 0.32 IKLFDK_07925 Benzoate membrane transport protein low > 98
Pseudomonas simiae WCS417 0.36 PS417_15310 type VI secretion protein 0.33 PS417_20910 membrane protein low > 88
Pseudomonas stutzeri RCH2 0.36 Psest_0127 type VI secretion protein, VC_A0110 family 0.32 Psest_1717 benzoate transporter low > 67
Pseudomonas orientalis W4I3 0.36 QF045_RS14215 type VI secretion system baseplate subunit TssF 0.32 QF045_RS22715 benzoate/H(+) symporter BenE family transporter low > 93
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_12145 type VI secretion protein 0.33 AO356_02585 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4301 Protein ImpG/VasA 0.35 Pf6N2E2_5299 Benzoate transport protein low > 103
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4956 protein of unknown function DUF879 0.37 Psyr_1839 Benzoate membrane transport protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4956 protein of unknown function DUF879 0.37 Psyr_1839 Benzoate membrane transport protein low > 86
Variovorax sp. OAS795 0.25 ABID97_RS12940 type VI secretion system baseplate subunit TssF 0.36 ABID97_RS04625 benzoate/H(+) symporter BenE family transporter low > 91
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS22110 type VI secretion protein ImpG 0.28 RR42_RS14695 membrane protein low > 128
Pseudomonas sp. BP01 0.25 JOY50_RS19900 tssF type VI secretion system baseplate subunit TssF 0.34 JOY50_RS15845 benzoate/H(+) symporter BenE family transporter low > 84
Klebsiella pneumoniae MKP103 0.24 KDGMDA_24740 type VI secretion system baseplate subunit TssF 0.29 KDGMDA_23155 benzoate transporter low > 95
Escherichia coli Nissle 1917 0.23 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF 0.33 ECOLIN_RS08270 BenE family transporter YdcO — —
Rahnella sp. WP5 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF 0.34 EX31_RS05715 benzoate/H(+) symporter BenE family transporter low > 89
Enterobacter sp. TBS_079 0.23 MPMX20_01644 hypothetical protein 0.29 MPMX20_02242 Inner membrane protein YdcO low > 85
Enterobacter asburiae PDN3 0.22 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family 0.28 EX28DRAFT_1224 benzoate transporter low > 76
Erwinia amylovora T8 0.22 OLJFJH_03085 type VI secretion system baseplate subunit TssF 0.35 OLJFJH_15290 Benzoate membrane transport protein low > 58
Pantoea sp. MT58 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF 0.33 IAI47_10270 benzoate/H(+) symporter BenE family transporter low > 76
Paraburkholderia graminis OAS925 0.21 ABIE53_003935 type VI secretion system protein ImpG 0.33 ABIE53_001417 benzoate membrane transport protein low > 113
Azospirillum sp. SherDot2 0.21 MPMX19_03419 hypothetical protein 0.28 MPMX19_03070 Inner membrane protein YdcO low > 112
Azospirillum brasilense Sp245 0.20 AZOBR_RS21230 hypothetical protein 0.29 AZOBR_RS19910 benzoate transporter low > 97
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS20160 type VI secretion protein 0.28 HSERO_RS06580 benzoate transporter low > 78
Variovorax sp. SCN45 0.20 GFF6367 T6SS component TssF (ImpG/VasA) 0.36 GFF6323 Benzoate transport protein low > 127
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05367 type VI secretion system protein ImpG 0.31 H281DRAFT_00287 benzoate membrane transport protein low > 103
Pseudomonas sp. RS175 0.19 PFR28_02388 hypothetical protein 0.34 PFR28_01059 Inner membrane protein YdcO low > 88
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS31715 type VI secretion system baseplate subunit TssF 0.31 QEN71_RS24590 benzoate/H(+) symporter BenE family transporter low > 153
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04600 type VI secretion protein 0.32 BPHYT_RS06050 membrane protein low > 109
Agrobacterium fabrum C58 0.19 Atu4337 hypothetical protein 0.28 Atu2265 benzoate transport protein low > 89
Pseudomonas sp. SVBP6 0.19 COO64_RS00470 tssF type VI secretion system baseplate subunit TssF 0.35 COO64_RS06545 benzoate/H(+) symporter BenE family transporter low > 93
Pseudomonas fluorescens SBW25 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.33 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter low > 109
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS19815 type VI secretion system baseplate subunit TssF 0.35 PagCFBP13505_RS05865 benzoate/H(+) symporter BenE family transporter low > 74
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.33 PFLU_RS22525 benzoate/H(+) symporter BenE family transporter low > 109
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_00062 hypothetical protein 0.33 GEMAOFIL_04404 Inner membrane protein YdcO low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4050 Protein ImpG/VasA 0.28 GFF2596 Benzoate transport protein low > 78
Serratia liquefaciens MT49 0.16 IAI46_05550 type VI secretion system baseplate subunit TssF 0.33 IAI46_11435 benzoate/H(+) symporter BenE family transporter low > 87
Bosea sp. OAE506 0.16 ABIE41_RS14385 type VI secretion system baseplate subunit TssF 0.22 ABIE41_RS09390 benzoate/H(+) symporter BenE family transporter low > 77
Acinetobacter radioresistens SK82 0.16 MPMX26_00966 hypothetical protein 0.33 MPMX26_01755 Inner membrane protein YdcO — —

Not shown: 12 genomes with orthologs for CSW01_14565 only; 25 genomes with orthologs for CSW01_09835 only