Conservation of cofitness between CSW01_08565 and CSW01_08640 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08565 hypothetical protein 1.0 CSW01_08640 envelope biogenesis factor ElyC 0.58 5
Escherichia coli Nissle 1917 0.80 ECOLIN_RS07555 YciI family protein 0.30 ECOLIN_RS04870 envelope biogenesis factor ElyC — —
Escherichia fergusonii Becca 0.80 EFB2_02674 Protein YciI 0.30 EFB2_03144 hypothetical protein low > 86
Escherichia coli BW25113 0.80 b1251 yciI orf, hypothetical protein (VIMSS) 0.30 b0920 ycbC conserved inner membrane protein (NCBI) low > 76
Escherichia coli BL21 0.80 ECD_01225 putative DGPF domain-containing enzyme 0.30 ECD_00924 envelope biogenesis factor; DUF218 superfamily protein — —
Escherichia coli ECRC100 0.79 OKFHMN_28670 yciI YciI family protein 0.30 OKFHMN_05425 elyC envelope biogenesis factor ElyC — —
Escherichia coli ECRC99 0.79 KEDOAH_25665 yciI YciI family protein 0.30 KEDOAH_22310 elyC envelope biogenesis factor ElyC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF2737 YciL protein 0.29 GFF3677 Membrane Protein Functionally coupled to the MukBEF Chromosome Partitioning Mechanism low > 78
Escherichia coli ECRC102 0.79 NIAGMN_27565 yciI YciI family protein 0.30 NIAGMN_03145 elyC envelope biogenesis factor ElyC — —
Escherichia coli ECRC101 0.79 MCAODC_21590 yciI YciI family protein 0.30 MCAODC_24815 elyC envelope biogenesis factor ElyC low > 87
Escherichia coli ECOR38 0.79 HEPCGN_25135 yciI YciI family protein 0.30 HEPCGN_23100 elyC envelope biogenesis factor ElyC 0.55 44
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02432 Protein YciI 0.30 OHPLBJKB_02747 hypothetical protein — —
Escherichia coli ECOR27 0.79 NOLOHH_20380 yciI YciI family protein 0.30 NOLOHH_21985 elyC envelope biogenesis factor ElyC low > 75
Escherichia coli ECRC98 0.79 JDDGAC_05905 yciI YciI family protein 0.30 JDDGAC_09035 elyC envelope biogenesis factor ElyC low > 86
Enterobacter sp. TBS_079 0.79 MPMX20_02577 Protein YciI 0.27 MPMX20_01578 hypothetical protein low > 85
Shewanella oneidensis MR-1 0.78 SO3036 conserved hypothetical protein (NCBI ptt file) 0.16 SO1657 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.78 Shew_2261 YciI-like protein (RefSeq) 0.21 Shew_1429 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.78 Shewana3_1504 YciI-like protein (RefSeq) 0.16 Shewana3_2789 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.77 Sama_2138 YciI-like protein (RefSeq) 0.18 Sama_2230 hypothetical protein (RefSeq) low > 62
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.28 EX28DRAFT_2016 Uncharacterized conserved protein low > 76
Serratia liquefaciens MT49 0.76 IAI46_14115 YciI family protein 0.31 IAI46_08710 envelope biogenesis factor ElyC — —
Pseudomonas simiae WCS417 0.76 PS417_22285 hypothetical protein 0.11 PS417_24650 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.75 PFLU_RS23925 YciI family protein 0.11 PFLU_RS26580 YdcF family protein low > 109
Dickeya dianthicola ME23 0.75 DZA65_RS10900 YciI family protein 0.32 DZA65_RS10215 envelope biogenesis factor ElyC low > 75
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS23925 YciI family protein 0.11 PFLU_RS26580 YdcF family protein low > 109
Klebsiella michiganensis M5al 0.75 BWI76_RS17195 hypothetical protein 0.27 BWI76_RS09825 envelope biogenesis factor ElyC low > 92
Dickeya dadantii 3937 0.75 DDA3937_RS10420 YciI family protein 0.33 DDA3937_RS09870 envelope biogenesis factor ElyC low > 74
Pectobacterium carotovorum WPP14 0.75 HER17_RS10975 YciI family protein 0.34 HER17_RS12070 envelope biogenesis factor ElyC low > 75
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_18485 hypothetical protein 0.11 AO356_15385 hypothetical protein — —
Dickeya dianthicola 67-19 0.74 HGI48_RS10425 YciI family protein 0.33 HGI48_RS09880 envelope biogenesis factor ElyC low > 71
Pseudomonas sp. RS175 0.74 PFR28_03321 Protein YciI 0.12 PFR28_03853 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_18510 hypothetical protein 0.10 AO353_06400 hypothetical protein low > 101
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_3588 YCII-related protein 0.12 Psyr_4350 Protein of unknown function DUF218 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_3588 YCII-related protein 0.12 Psyr_4350 Protein of unknown function DUF218 — —
Pseudomonas sp. DMC3 0.73 GFF2397 Protein YciI 0.11 GFF3895 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4407 YciL protein 0.10 PfGW456L13_1375 Putative membrane protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3549 YciL protein 0.10 Pf1N1B4_2707 Putative membrane protein low > 87
Pseudomonas putida KT2440 0.72 PP_4502 putative enzyme 0.12 PP_4792 conserved exported protein of unknown function low > 96
Pseudomonas sp. SVBP6 0.72 COO64_RS21765 YciI family protein 0.12 COO64_RS15535 YdcF family protein low > 93
Pseudomonas stutzeri RCH2 0.71 Psest_1886 Uncharacterized protein conserved in bacteria 0.10 Psest_0527 Uncharacterized conserved protein low > 67
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5623 YciL protein 0.11 Pf6N2E2_5013 Putative membrane protein low > 103
Pantoea sp. MT58 0.70 IAI47_09125 YciI family protein 0.25 IAI47_12805 envelope biogenesis factor ElyC low > 76
Dechlorosoma suillum PS 0.70 Dsui_2887 hypothetical protein 0.09 Dsui_2924 hypothetical protein low > 51
Erwinia tracheiphila SCR3 0.69 LU632_RS12835 YciI family protein 0.28 LU632_RS09860 elyC envelope biogenesis factor ElyC low > 74
Alteromonas macleodii MIT1002 0.69 MIT1002_01424 YciI-like protein 0.12 MIT1002_02841 hypothetical protein low > 70
Rahnella sp. WP5 0.68 EX31_RS10020 YciI family protein 0.28 EX31_RS18185 envelope biogenesis factor ElyC low > 89
Pseudomonas aeruginosa PA14 0.68 IKLFDK_16275 YciI family protein 0.12 IKLFDK_20565 DUF218 domain-containing protein low > 101
Pseudomonas sp. S08-1 0.68 OH686_20785 YciL protein 0.11 OH686_09240 Uncharacterized DUF218 membrane protein low > 80
Erwinia amylovora T8 0.66 OLJFJH_13435 YciI family protein 0.26 OLJFJH_16085 envelope biogenesis factor ElyC low > 58
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS02840 YciI family protein 0.10 ABZR86_RS18570 YdcF family protein low > 74
Lysobacter sp. OAE881 0.57 ABIE51_RS08790 YciI family protein 0.10 ABIE51_RS12845 YdcF family protein low > 62

Not shown: 14 genomes with orthologs for CSW01_08565 only; 9 genomes with orthologs for CSW01_08640 only