Conservation of cofitness between CSW01_01025 and CSW01_07820 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01025 LysE family translocator 1.0 CSW01_07820 RidA family protein 0.63 19
Pseudomonas aeruginosa PA14 0.40 IKLFDK_07765 lysine transporter LysE 0.40 IKLFDK_26935 RidA family protein low > 101
Shewanella oneidensis MR-1 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) 0.39 SO0337 hypothetical translation initiation inhibitor, yjgF family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) 0.39 Shewana3_3834 endoribonuclease L-PSP (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.28 Psest_3222 Putative threonine efflux protein 0.36 Psest_3792 Putative translation initiation inhibitor, yjgF family low > 67
Shewanella amazonensis SB2B 0.28 Sama_1550 threonine efflux protein, putative (RefSeq) 0.40 Sama_3317 hypothetical protein (RefSeq) low > 62
Escherichia coli ECOR27 0.27 NOLOHH_06485 rhtC threonine export protein RhtC 0.36 NOLOHH_17095 yoaB RutC family protein YoaB low > 75
Escherichia coli ECRC101 0.27 MCAODC_04860 rhtC threonine export protein RhtC 0.36 MCAODC_18835 yoaB RutC family protein YoaB low > 87
Escherichia coli ECRC102 0.27 NIAGMN_12110 rhtC threonine export protein RhtC 0.36 NIAGMN_01490 yoaB RutC family protein YoaB
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_04228 Threonine efflux protein 0.36 OHPLBJKB_01924 2-iminobutanoate/2-iminopropanoate deaminase low > 73
Escherichia coli ECRC100 0.27 OKFHMN_14355 rhtC threonine export protein RhtC 0.36 OKFHMN_26575 yoaB RutC family protein YoaB low > 80
Escherichia coli ECRC99 0.27 KEDOAH_13795 rhtC threonine export protein RhtC 0.36 KEDOAH_01535 yoaB RutC family protein YoaB
Escherichia coli ECRC98 0.27 JDDGAC_17980 rhtC threonine export protein RhtC 0.36 JDDGAC_01150 yoaB RutC family protein YoaB low > 86
Escherichia coli BW25113 0.27 b3823 rhtC threonine efflux system (NCBI) 0.36 b1809 b1809 orf, hypothetical protein (VIMSS) low > 76
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_1618 L-lysine permease 0.35 PfGW456L13_813 Translation initiation inhibitor low > 87
Pseudomonas fluorescens SBW25 0.27 PFLU_RS04580 lysine transporter LysE 0.38 PFLU_RS29375 RidA family protein low > 109
Escherichia coli ECOR38 0.27 HEPCGN_13055 rhtC threonine export protein RhtC 0.36 HEPCGN_04965 yoaB RutC family protein YoaB low > 87
Escherichia coli ECRC62 0.27 BNILDI_05045 rhtC threonine export protein RhtC 0.36 BNILDI_15880 yoaB RutC family protein YoaB low > 75
Erwinia amylovora T8 0.27 OLJFJH_01390 lysine transporter LysE 0.34 OLJFJH_13075 Enamine/imine deaminase low > 58
Escherichia coli BL21 0.27 ECD_03702 threonine efflux pump 0.36 ECD_01779 putative reactive intermediate deaminase low > 61
Escherichia fergusonii Becca 0.27 EFB2_04814 Threonine efflux protein 0.36 EFB2_02191 2-iminobutanoate/2-iminopropanoate deaminase low > 86
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS04580 lysine transporter LysE 0.38 PFLU_RS29375 RidA family protein low > 109
Escherichia coli Nissle 1917 0.27 ECOLIN_RS21940 threonine export protein RhtC 0.36 ECOLIN_RS10060 RidA family protein
Pseudomonas simiae WCS417 0.27 PS417_04535 lysine transporter LysE 0.38 PS417_27700 cytochrome C2
Rahnella sp. WP5 0.26 EX31_RS03810 LysE family translocator 0.37 EX31_RS10620 RidA family protein low > 89
Serratia liquefaciens MT49 0.26 IAI46_03210 LysE family translocator 0.38 IAI46_14555 RidA family protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_15005 lysine transporter LysE 0.36 AO353_09150 cytochrome C2 low > 101
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.38 Psyr_0236 Endoribonuclease L-PSP
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.38 Psyr_0236 Endoribonuclease L-PSP
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3245 L-lysine permease 0.37 Pf6N2E2_4392 Translation initiation inhibitor low > 103
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_2955 L-lysine permease 0.36 Pf1N1B4_2145 Translation initiation inhibitor low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF249 L-lysine permease 0.37 GFF2824 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein low > 78
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein 0.36 EX28DRAFT_0749 Putative translation initiation inhibitor, yjgF family low > 76
Klebsiella michiganensis M5al 0.26 BWI76_RS01250 threonine export protein RhtC 0.39 BWI76_RS17820 hypothetical protein low > 92
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_06930 lysine transporter LysE 0.37 AO356_12625 cytochrome C2 low > 104
Pseudomonas sp. DMC3 0.26 GFF4453 Threonine efflux protein 0.34 GFF389 2-iminobutanoate/2-iminopropanoate deaminase low > 89
Pseudomonas sp. RS175 0.25 PFR28_03621 Threonine efflux protein 0.38 PFR28_04398 2-iminobutanoate/2-iminopropanoate deaminase low > 88
Pseudomonas sp. S08-1 0.25 OH686_06335 L-lysine permease 0.44 OH686_13690 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein low > 80
Dickeya dianthicola ME23 0.25 DZA65_RS21040 threonine export protein RhtC 0.40 DZA65_RS11625 RidA family protein low > 75
Dickeya dadantii 3937 0.25 DDA3937_RS18300 LysE family translocator 0.37 DDA3937_RS11245 RidA family protein low > 74
Pectobacterium carotovorum WPP14 0.25 HER17_RS02915 LysE family translocator 0.36 HER17_RS11295 RidA family protein low > 75
Pantoea sp. MT58 0.25 IAI47_18355 threonine export protein RhtC 0.37 IAI47_08805 RidA family protein low > 76
Pseudomonas sp. SVBP6 0.24 COO64_RS03395 LysE family translocator 0.37 COO64_RS01390 RidA family protein low > 93
Dickeya dianthicola 67-19 0.24 HGI48_RS20000 threonine export protein RhtC 0.33 HGI48_RS11280 RidA family protein low > 71
Enterobacter sp. TBS_079 0.23 MPMX20_04457 Threonine efflux protein 0.36 MPMX20_02715 2-iminobutanoate/2-iminopropanoate deaminase low > 85
Sinorhizobium meliloti 1021 0.23 SMc02484 amino acid efflux transmembrane protein 0.37 SMc00791 hypothetical protein low > 103
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS21510 lysine transporter LysE 0.40 RR42_RS06580 aminoacrylate peracid reductase low > 128
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS21900 LysE family transporter 0.33 ABZR87_RS23140 RidA family protein
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS00520 LysE family transporter 0.36 QEN71_RS05260 RidA family protein low > 153
Rhizobium sp. OAE497 0.19 ABIE40_RS07035 LysE family transporter 0.34 ABIE40_RS23120 RidA family protein low > 107
Rhodospirillum rubrum S1H 0.14 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) 0.31 Rru_A1174 Endoribonuclease L-PSP (NCBI) low > 58

Not shown: 4 genomes with orthologs for CSW01_01025 only; 29 genomes with orthologs for CSW01_07820 only