| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_02430 | | non-canonical purine NTP pyrophosphatase | 1.0 | CSW01_05895 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | 0.50 | 20 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_22870 | rdgB | XTP/dITP diphosphatase | 0.66 | JDDGAC_00795 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 86 |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_19240 | rdgB | XTP/dITP diphosphatase | 0.66 | OKFHMN_26220 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 80 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_08900 | rdgB | XTP/dITP diphosphatase | 0.66 | KEDOAH_01885 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | — | — |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_17005 | rdgB | XTP/dITP diphosphatase | 0.66 | NIAGMN_01840 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | — | — |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS16430 | | XTP/dITP diphosphatase | 0.66 | ECOLIN_RS10700 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | — | — |
| Escherichia fergusonii Becca | 0.66 | EFB2_00948 | | dITP/XTP pyrophosphatase | 0.66 | EFB2_02071 | | tRNA U34 carboxymethyltransferase | low | > 86 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_2992 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.66 | EX28DRAFT_0686 | | tRNA (mo5U34)-methyltransferase | low | > 76 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_11110 | rdgB | XTP/dITP diphosphatase | 0.66 | NOLOHH_16665 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_00762 | | dITP/XTP pyrophosphatase | 0.66 | OHPLBJKB_01857 | | tRNA U34 carboxymethyltransferase | low | > 73 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_09690 | rdgB | XTP/dITP diphosphatase | 0.66 | BNILDI_15455 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 75 |
| Escherichia coli BW25113 | 0.65 | b2954 | yggV | putative deoxyribonucleotide triphosphate pyrophosphatase (NCBI) | 0.66 | b1871 | yecP | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.65 | HEPCGN_18545 | rdgB | XTP/dITP diphosphatase | 0.66 | HEPCGN_04630 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 87 |
| Enterobacter sp. TBS_079 | 0.65 | MPMX20_03812 | | dITP/XTP pyrophosphatase | 0.65 | MPMX20_02776 | | tRNA U34 carboxymethyltransferase | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF3057 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.65 | GFF1652 | | tRNA (5-methoxyuridine) 34 synthase | low | > 78 |
| Escherichia coli BL21 | 0.65 | ECD_02784 | | dITP/XTP pyrophosphatase | 0.66 | ECD_01842 | | tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent | — | — |
| Escherichia coli ECRC101 | 0.65 | MCAODC_09760 | rdgB | XTP/dITP diphosphatase | 0.66 | MCAODC_19185 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 87 |
| Rahnella sp. WP5 | 0.65 | EX31_RS02705 | | XTP/dITP diphosphatase | 0.66 | EX31_RS17290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 89 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS24115 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.67 | BWI76_RS18195 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 92 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_21430 | | XTP/dITP diphosphatase | 0.66 | IAI46_14675 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 86 |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS18455 | | XTP/dITP diphosphatase | 0.67 | DZA65_RS10475 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 75 |
| Pantoea sp. MT58 | 0.64 | IAI47_03585 | | XTP/dITP diphosphatase | 0.64 | IAI47_08405 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 76 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS17320 | | XTP/dITP diphosphatase | 0.66 | DDA3937_RS10035 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 74 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS17365 | | XTP/dITP diphosphatase | 0.67 | HGI48_RS10065 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 71 |
| Erwinia tracheiphila SCR3 | 0.61 | LU632_RS05450 | | XTP/dITP diphosphatase | 0.67 | LU632_RS13460 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.60 | MIT1002_00940 | | dITP/XTP pyrophosphatase | 0.59 | MIT1002_02226 | | tRNA (mo5U34)-methyltransferase | low | > 70 |
| Shewanella loihica PV-4 | 0.60 | Shew_1132 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) | 0.64 | Shew_2082 | | putative methyltransferase (RefSeq) | — | — |
| Erwinia amylovora T8 | 0.60 | OLJFJH_08520 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.64 | OLJFJH_12815 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 58 |
| Kangiella aquimarina DSM 16071 | 0.60 | B158DRAFT_0200 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.53 | B158DRAFT_1515 | | methyltransferase, putative | low | > 40 |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS03790 | | XTP/dITP diphosphatase | 0.65 | HER17_RS11890 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 75 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_1189 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (RefSeq) | 0.63 | Shewana3_1950 | | putative methyltransferase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.58 | SO3358 | | HAM1 protein (NCBI ptt file) | 0.64 | SO2436 | | methyltransferase, putative (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.56 | Sama_2482 | | Ham1-like protein (RefSeq) | 0.63 | Sama_1846 | | methyltransferase, putative (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.56 | HP15_281 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.51 | HP15_2493 | | methyltransferase | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_0472 | | Ham1-like protein | 0.52 | Psyr_3947 | | Methyltransferase, putative | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_0472 | | Ham1-like protein | 0.52 | Psyr_3947 | | Methyltransferase, putative | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_13395 | | non-canonical purine NTP pyrophosphatase | 0.52 | AO356_06450 | | tRNA (mo5U34)-methyltransferase | low | > 104 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_04248 | | dITP/XTP pyrophosphatase | 0.52 | PFR28_00318 | | tRNA U34 carboxymethyltransferase | low | > 88 |
| Pseudomonas sp. SVBP6 | 0.52 | COO64_RS12970 | rdgB | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.51 | COO64_RS16610 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 93 |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_4594 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.52 | Pf6N2E2_3158 | | tRNA (5-methoxyuridine) 34 synthase | low | > 103 |
| Pseudomonas sp. DMC3 | 0.52 | GFF215 | | dITP/XTP pyrophosphatase | 0.52 | GFF4316 | | tRNA U34 carboxymethyltransferase | low | > 89 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_26755 | | nucleoside-triphosphate diphosphatase | 0.52 | PS417_05220 | | tRNA methyltransferase | low | > 88 |
| Pseudomonas putida KT2440 | 0.52 | PP_5100 | | dITP/XTP pyrophosphatase | 0.51 | PP_1440 | | tRNA (mo5U34)-methyltransferase | low | > 96 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS20880 | rdgB | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.51 | JOY50_RS14730 | cmoB | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 84 |
| Pseudomonas aeruginosa PA14 | 0.52 | IKLFDK_23490 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.51 | IKLFDK_03325 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS28400 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.52 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS28400 | | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | 0.52 | PFLU_RS05290 | | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_08195 | | non-canonical purine NTP pyrophosphatase | 0.52 | AO353_16015 | | tRNA (mo5U34)-methyltransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_2335 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.52 | Pf1N1B4_826 | | tRNA (5-methoxyuridine) 34 synthase | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_1004 | | Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) | 0.52 | PfGW456L13_4812 | | tRNA (5-methoxyuridine) 34 synthase | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_0277 | | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family | 0.52 | Psest_3085 | | methyltransferase, putative | low | > 67 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_11015 | | non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family | 0.52 | OH686_05375 | | tRNA (mo5U34)-methyltransferase | low | > 80 |
Not shown: 61 genomes with orthologs for CSW01_02430 only; 0 genomes with orthologs for CSW01_05895 only