| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03635 | | 3-deoxy-7-phosphoheptulonate synthase | 1.0 | CSW01_05825 | | transcriptional regulator HexR | 0.61 | 20 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS05375 | | 3-deoxy-7-phosphoheptulonate synthase | 0.77 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Dickeya dadantii 3937 | 0.72 | DDA3937_RS16140 | | 3-deoxy-7-phosphoheptulonate synthase | 0.75 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | — | — |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS17355 | | 3-deoxy-7-phosphoheptulonate synthase | 0.75 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | — | — |
| Rahnella sp. WP5 | 0.72 | EX31_RS07595 | | 3-deoxy-7-phosphoheptulonate synthase | 0.76 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | low | > 89 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS16260 | | 3-deoxy-7-phosphoheptulonate synthase | 0.75 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | — | — |
| Pantoea sp. MT58 | 0.72 | IAI47_04400 | | 3-deoxy-7-phosphoheptulonate synthase | 0.63 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.71 | PagCFBP13505_RS16565 | | 3-deoxy-7-phosphoheptulonate synthase | 0.61 | PagCFBP13505_RS02370 | | transcriptional regulator HexR | low | > 74 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS14705 | | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | low | > 55 |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_12890 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_01107 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.73 | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | low | > 74 |
| Escherichia coli BL21 | 0.71 | ECD_02490 | | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible | 0.73 | ECD_01824 | | putative DNA-binding transcriptional regulator | low | > 61 |
| Escherichia coli ECOR38 | 0.71 | HEPCGN_20335 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | low | > 88 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_18985 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | low | > 80 |
| Escherichia coli ECRC100 | 0.71 | OKFHMN_21215 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | low | > 79 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_11745 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | low | > 87 |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_07005 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC62 | 0.71 | BNILDI_11695 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | low | > 75 |
| Escherichia fergusonii Becca | 0.71 | EFB2_01291 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.73 | EFB2_02089 | | HTH-type transcriptional regulator HexR | low | > 86 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_24880 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.73 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | low | > 87 |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_2702 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | 0.74 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | low | > 76 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_03469 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.74 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | low | > 85 |
| Escherichia coli BW25113 | 0.71 | b2601 | aroF | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) | 0.73 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Klebsiella pneumoniae MKP103 | 0.71 | KDGMDA_02175 | | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.72 | KDGMDA_25375 | | transcriptional regulator HexR | low | > 95 |
| Klebsiella michiganensis M5al | 0.71 | BWI76_RS21480 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.72 | BWI76_RS18110 | | transcriptional regulator HexR | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF4176 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.72 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | low | > 78 |
| Serratia liquefaciens MT49 | 0.70 | IAI46_03955 | | 3-deoxy-7-phosphoheptulonate synthase | 0.78 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | low | > 87 |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_01314 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.73 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.69 | IJEDHG_01270 | | 3-deoxy-7-phosphoheptulonate synthase | 0.64 | IJEDHG_22185 | | transcriptional regulator HexR | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.69 | LU632_RS15450 | | 3-deoxy-7-phosphoheptulonate synthase | 0.64 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | low | > 73 |
| Shewanella sp. ANA-3 | 0.68 | Shewana3_3013 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.77 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.68 | SO1361 | aroF | phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) | 0.77 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.66 | Shew_1067 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.78 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.65 | Sama_0893 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.77 | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.63 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | AO356_05165 | | transcriptional regulator | low | > 104 |
| Pseudomonas putida KT2440 | 0.63 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | PP_1021 | | DNA-binding transcriptional regulator | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.63 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.63 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.63 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.57 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.63 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.57 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | low | > 103 |
| Pseudomonas simiae WCS417 | 0.63 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | PS417_22115 | | transcriptional regulator | low | > 88 |
| Pseudomonas sp. RS175 | 0.63 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.57 | PFR28_00572 | | HTH-type transcriptional regulator HexR | low | > 88 |
| Pseudomonas sp. BP01 | 0.63 | JOY50_RS25800 | | 3-deoxy-7-phosphoheptulonate synthase | 0.57 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | low | > 84 |
| Pseudomonas orientalis W4I3 | 0.63 | QF045_RS11150 | | 3-deoxy-7-phosphoheptulonate synthase | 0.57 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.63 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | AO353_03365 | | transcriptional regulator | low | > 101 |
| Pseudomonas sp. SVBP6 | 0.63 | COO64_RS09805 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | COO64_RS04585 | hexR | DNA-binding transcriptional regulator HexR | low | > 93 |
| Pseudomonas syringae pv. syringae B728a | 0.63 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.56 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.63 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.56 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.57 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.62 | GEMAOFIL_01819 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.57 | GEMAOFIL_04559 | | HTH-type transcriptional regulator HexR | low | > 96 |
| Pseudomonas sp. S08-1 | 0.62 | OH686_01760 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | low | > 80 |
| Pseudomonas sp. DMC3 | 0.62 | GFF4623 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.58 | GFF5141 | | HTH-type transcriptional regulator HexR | low | > 89 |
| Pseudomonas segetis P6 | 0.62 | MPMX49_02647 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.57 | MPMX49_02832 | | HTH-type transcriptional regulator HexR | low | > 75 |
| Pseudomonas aeruginosa PUPa3 | 0.62 | DQ20_RS54515 | | 3-deoxy-7-phosphoheptulonate synthase | 0.55 | DQ20_RS34520 | | MurR/RpiR family transcriptional regulator | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.62 | IKLFDK_08455 | | 3-deoxy-7-phosphoheptulonate synthase | 0.55 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.62 | DY961_RS20425 | | 3-deoxy-7-phosphoheptulonate synthase | 0.55 | DY961_RS01015 | | MurR/RpiR family transcriptional regulator | low | > 100 |
| Marinobacter adhaerens HP15 | 0.61 | HP15_1814 | | phospho-2-dehydro-3-heoxyheptonate aldolase | 0.55 | HP15_2180 | | transcriptional regulator, RpiR family protein | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.60 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.57 | Psest_0851 | | Transcriptional regulators | low | > 67 |
Not shown: 5 genomes with orthologs for CSW01_03635 only; 22 genomes with orthologs for CSW01_05825 only