| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00560 | | DNA polymerase I | 1.0 | CSW01_05395 | | protease SohB | 0.86 | 17 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_24985 | | DNA polymerase I | 0.58 | IAI46_13980 | | protease SohB | low | > 86 |
| Rahnella sp. WP5 | 0.65 | EX31_RS15905 | | DNA polymerase I | 0.58 | EX31_RS09905 | | protease SohB | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.65 | HER17_RS21470 | | DNA polymerase I | 0.57 | HER17_RS10885 | | protease SohB | — | — |
| Pantoea sp. MT58 | 0.65 | IAI47_00430 | | DNA polymerase I | 0.51 | IAI47_09225 | | protease SohB | low | > 76 |
| Erwinia amylovora T8 | 0.64 | OLJFJH_05470 | | DNA polymerase I | 0.52 | OLJFJH_13520 | | protease SohB | low | > 58 |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_4343 | | DNA polymerase I (EC 2.7.7.7) | 0.50 | EX28DRAFT_0943 | | Periplasmic serine proteases (ClpP class) | — | — |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_12785 | polA | DNA polymerase I | 0.53 | HEPCGN_25585 | sohB | protease SohB | — | — |
| Escherichia fergusonii Becca | 0.64 | EFB2_04753 | | DNA polymerase I | 0.53 | EFB2_02655 | | putative protease SohB | — | — |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS22270 | | DNA polymerase I | 0.54 | ECOLIN_RS07655 | | protease SohB | — | — |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_17775 | polA | DNA polymerase I | 0.53 | JDDGAC_05160 | sohB | protease SohB | — | — |
| Escherichia coli BL21 | 0.64 | ECD_03749 | | 5 | 0.54 | ECD_01248 | | inner membrane protein, S49 peptidase family protein | — | — |
| Escherichia coli ECRC100 | 0.64 | OKFHMN_14150 | polA | DNA polymerase I | 0.53 | OKFHMN_02615 | sohB | protease SohB | — | — |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_11905 | polA | DNA polymerase I | 0.53 | NIAGMN_26785 | sohB | protease SohB | — | — |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_06280 | polA | DNA polymerase I | 0.53 | NOLOHH_20280 | sohB | protease SohB | — | — |
| Escherichia coli BW25113 | 0.64 | b3863 | polA | DNA polymerase I (NCBI) | 0.54 | b1272 | sohB | predicted inner membrane peptidase (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.64 | MCAODC_04650 | polA | DNA polymerase I | 0.53 | MCAODC_15650 | sohB | protease SohB | — | — |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_14000 | polA | DNA polymerase I | 0.53 | KEDOAH_26150 | sohB | protease SohB | — | — |
| Escherichia coli ECRC62 | 0.64 | BNILDI_05250 | polA | DNA polymerase I | 0.53 | BNILDI_18430 | sohB | protease SohB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_04189 | | DNA polymerase I | 0.54 | OHPLBJKB_02412 | | putative protease SohB | — | — |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS23870 | polA | DNA polymerase I | 0.55 | LU632_RS12720 | sohB | protease SohB | — | — |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_04601 | | DNA polymerase I | 0.51 | MPMX20_02504 | | putative protease SohB | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.63 | GFF2216 | | DNA polymerase I (EC 2.7.7.7) | 0.50 | GFF2716 | | Possible protease sohB (EC 3.4.21.-) | low | > 78 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS00355 | | DNA polymerase I | 0.50 | BWI76_RS11915 | | protease SohB | low | > 92 |
| Dickeya dadantii 3937 | 0.63 | DDA3937_RS00105 | | DNA polymerase I | 0.57 | DDA3937_RS10515 | | protease SohB | — | — |
| Shewanella loihica PV-4 | 0.63 | Shew_3714 | | DNA polymerase I (RefSeq) | 0.52 | Shew_2407 | | putative periplasmic protease (RefSeq) | low | > 60 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS21260 | | DNA polymerase I | 0.55 | HGI48_RS10515 | | protease SohB | — | — |
| Shewanella amazonensis SB2B | 0.63 | Sama_0093 | | DNA-directed DNA polymerase (RefSeq) | 0.58 | Sama_2119 | | putative periplasmic protease (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_4109 | | DNA polymerase I (RefSeq) | 0.54 | Shewana3_1530 | | putative periplasmic protease (RefSeq) | — | — |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS22235 | | DNA polymerase I | 0.56 | DZA65_RS10995 | | protease SohB | — | — |
| Shewanella oneidensis MR-1 | 0.62 | SO4669 | polA | DNA polymerase I (NCBI ptt file) | 0.51 | SO_2933 | | putative periplasmic protease (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_00014 | | DNA polymerase I | 0.51 | MIT1002_01969 | | putative protease SohB | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.59 | B158DRAFT_0499 | | DNA polymerase I (EC 2.7.7.7) | 0.48 | B158DRAFT_2210 | | Periplasmic serine proteases (ClpP class) | low | > 40 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_4219 | | DNA polymerase I | 0.48 | Psest_2085 | | Periplasmic serine proteases (ClpP class) | low | > 67 |
| Pseudomonas aeruginosa PA14 | 0.58 | IKLFDK_25945 | | DNA polymerase I | 0.44 | IKLFDK_08910 | | protease SohB | 0.59 | 67 |
| Pseudomonas sp. BP01 | 0.58 | JOY50_RS21110 | polA | DNA polymerase I | 0.49 | JOY50_RS03980 | sohB | protease SohB | low | > 84 |
| Pseudomonas putida KT2440 | 0.58 | PP_0123 | | DNA polymerase I, 5 | 0.49 | PP_3922 | | putative inner membrane peptidase | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.57 | COO64_RS02475 | polA | DNA polymerase I | 0.45 | COO64_RS24880 | sohB | protease SohB | low | > 93 |
| Pseudomonas sp. S08-1 | 0.57 | OH686_12215 | | DNA polymerase I | 0.45 | OH686_03495 | | Peptidase, U7 family | low | > 80 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_00405 | | DNA polymerase I | 0.48 | PS417_12020 | | peptidase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_10930 | | DNA polymerase I | 0.46 | AO353_22785 | | peptidase | low | > 101 |
| Pseudomonas sp. DMC3 | 0.55 | GFF631 | | DNA polymerase I | 0.48 | GFF3694 | | putative protease SohB | low | > 89 |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS00395 | | DNA polymerase I | 0.48 | PFLU_RS12770 | | protease SohB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS00395 | | DNA polymerase I | 0.48 | PFLU_RS12770 | | protease SohB | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_0270 | | DNA polymerase I | 0.46 | Psyr_2460 | | inner membrane peptidase, Serine peptidase, MEROPS family S49 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_0270 | | DNA polymerase I | 0.46 | Psyr_2460 | | inner membrane peptidase, Serine peptidase, MEROPS family S49 | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_1875 | | DNA polymerase I (EC 2.7.7.7) | 0.47 | Pf1N1B4_5668 | | Peptidase, U7 family | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_11465 | | DNA polymerase I | 0.49 | AO356_00565 | | peptidase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_594 | | DNA polymerase I (EC 2.7.7.7) | 0.47 | PfGW456L13_2840 | | Peptidase, U7 family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4162 | | DNA polymerase I (EC 2.7.7.7) | 0.50 | Pf6N2E2_2075 | | Peptidase, U7 family | low | > 103 |
| Pseudomonas sp. RS175 | 0.54 | PFR28_04624 | | DNA polymerase I | 0.47 | PFR28_01364 | | putative protease SohB | low | > 88 |
| Marinobacter adhaerens HP15 | 0.52 | HP15_293 | | DNA polymerase I | 0.45 | HP15_1798 | | sohB protein, peptidase U7 family | low | > 73 |
Not shown: 57 genomes with orthologs for CSW01_00560 only; 0 genomes with orthologs for CSW01_05395 only