Conservation of cofitness between CSW01_14085 and CSW01_03215 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14085 transcriptional regulator 1.0 CSW01_03215 ABC transporter ATP-binding protein 0.83 1
Alteromonas macleodii MIT1002 0.74 MIT1002_00845 putative transcriptional regulatory protein YeeN 0.34 MIT1002_00117 Maltose/maltodextrin import ATP-binding protein MalK low > 70
Shewanella loihica PV-4 0.73 Shew_3408 hypothetical protein (RefSeq) 0.48 Shew_0863 ABC transporter-related protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.70 Sama_2410 hypothetical protein (RefSeq) 0.43 Sama_0668 iron(III) ABC transporter, ATP-binding protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.70 Shewana3_1155 hypothetical protein (RefSeq) 0.47 Shewana3_3515 ABC transporter related (RefSeq) low > 73
Shewanella oneidensis MR-1 0.69 SO3401 conserved hypothetical protein TIGR01033 (NCBI ptt file) 0.47 SO0742 iron(III) ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0606 Uncharacterized conserved protein 0.36 B158DRAFT_1227 ABC-type spermidine/putrescine transport systems, ATPase components
Marinobacter adhaerens HP15 0.67 HP15_899 protein YeeN 0.41 HP15_749 iron(III) ABC transporter, ATP-binding protein low > 73
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS04735 hypothetical protein 0.38 RR42_RS04350 ABC transporter ATP-binding protein low > 128
Pectobacterium carotovorum WPP14 0.33 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator 0.41 HER17_RS05520 ABC transporter ATP-binding protein low > 75
Pseudomonas sp. DMC3 0.32 GFF5187 Transcriptional regulatory protein PmpR 0.39 GFF5103 Vitamin B12 import ATP-binding protein BtuD low > 89
Dickeya dadantii 3937 0.32 DDA3937_RS10065 YebC/PmpR family DNA-binding transcriptional regulator 0.36 DDA3937_RS15995 ABC transporter ATP-binding protein low > 74
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1850 FIG000859: hypothetical protein YebC 0.39 PfGW456L13_1738 Ferric iron ABC transporter, ATP-binding protein low > 87
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1407 Protein of unknown function DUF28 0.39 Psyr_3902 ABC transporter:TOBE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1407 Protein of unknown function DUF28 0.39 Psyr_3902 ABC transporter:TOBE low > 86
Dechlorosoma suillum PS 0.32 Dsui_0489 DNA-binding regulatory protein, YebC/PmpR family 0.36 Dsui_2943 ABC-type spermidine/putrescine transport system, ATPase component low > 51
Dickeya dianthicola 67-19 0.31 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator 0.35 HGI48_RS16115 ABC transporter ATP-binding protein low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator 0.35 DZA65_RS17200 ABC transporter ATP-binding protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.39 Pf6N2E2_5578 Ferric iron ABC transporter, ATP-binding protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_18010 hypothetical protein 0.38 AO356_18270 iron ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_640 FIG000859: hypothetical protein YebC 0.38 Pf1N1B4_763 Ferric iron ABC transporter, ATP-binding protein
Pseudomonas sp. RS175 0.31 PFR28_03415 Transcriptional regulatory protein PmpR 0.39 PFR28_03364 Vitamin B12 import ATP-binding protein BtuD low > 88
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_03595 hypothetical protein 0.39 AO353_04160 iron ABC transporter ATP-binding protein low > 101
Pseudomonas sp. SVBP6 0.30 COO64_RS20085 YebC/PmpR family DNA-binding transcriptional regulator 0.39 COO64_RS16820 ABC transporter ATP-binding protein low > 93
Pseudomonas simiae WCS417 0.30 PS417_22460 hypothetical protein 0.36 PS417_05590 iron ABC transporter ATP-binding protein
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.36 PFLU_RS05675 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS24100 YebC/PmpR family DNA-binding transcriptional regulator 0.36 PFLU_RS05675 ABC transporter ATP-binding protein low > 109
Agrobacterium fabrum C58 0.30 Atu3727 hypothetical protein 0.35 Atu0406 ABC transporter, nucleotide binding/ATPase protein low > 89
Pseudomonas lactucae CFBP13502 0.29 GEMAOFIL_04644 Transcriptional regulatory protein PmpR 0.39 GEMAOFIL_01305 Vitamin B12 import ATP-binding protein BtuD low > 96
Acidovorax sp. GW101-3H11 0.29 Ac3H11_2422 FIG000859: hypothetical protein 0.37 Ac3H11_3972 Ferric iron ABC transporter, ATP-binding protein
Pseudomonas sp. BP01 0.28 JOY50_RS01830 YebC/PmpR family DNA-binding transcriptional regulator 0.39 JOY50_RS14885 ABC transporter ATP-binding protein low > 84
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS45180 YebC/PmpR family DNA-binding transcriptional regulator 0.36 DQ20_RS41825 ABC transporter ATP-binding protein
Pseudomonas aeruginosa MRSN321 0.28 DY961_RS07610 YebC/PmpR family DNA-binding transcriptional regulator 0.36 DY961_RS15325 ABC transporter ATP-binding protein low > 100
Pseudomonas aeruginosa PA14 0.28 IKLFDK_04360 YebC/PmpR family DNA-binding transcriptional regulator 0.36 IKLFDK_18060 iron ABC transporter ATP-binding protein low > 98
Pseudomonas stutzeri RCH2 0.28 Psest_1494 DNA-binding regulatory protein, YebC/PmpR family 0.37 Psest_1290 ABC-type spermidine/putrescine transport systems, ATPase components
Pseudomonas putida KT2440 0.27 PP_1214 putative transcriptional regulatory protein 0.39 PP_1078 putative ABC transporter, ATP-binding protein low > 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF4523 FIG000859: hypothetical protein YebC 0.34 GFF662 Ferric iron ABC transporter, ATP-binding protein low > 90
Pseudomonas sp. S08-1 0.27 OH686_19120 Probable transcriptional regulatory protein YebC 0.38 OH686_20400 Ferric iron ABC transporter, ATP-binding protein low > 80
Pseudomonas segetis P6 0.27 ACVTMO_RS08345 YebC/PmpR family DNA-binding transcriptional regulator 0.41 ACVTMO_RS07115 ABC transporter ATP-binding protein low > 75
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_1239 DNA-binding regulatory protein, YebC/PmpR family 0.26 Echvi_1022 ABC-type spermidine/putrescine transport systems, ATPase components low > 79
Pseudomonas orientalis W4I3 0.25 QF045_RS24625 YebC/PmpR family DNA-binding transcriptional regulator 0.38 QF045_RS08515 ABC transporter ATP-binding protein low > 93
Rhodospirillum rubrum S1H 0.25 Rru_A1086 hypothetical protein (RefSeq) 0.35 Rru_A0767 ABC transporter component (NCBI) low > 58
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_1017 hypothetical protein 0.35 Synpcc7942_1406 futC ATPase
Synechocystis sp000284455 PCC 6803 0.23 SGL_RS12485 YebC/PmpR family DNA-binding transcriptional regulator 0.38 SGL_RS10355 ABC transporter ATP-binding protein

Not shown: 78 genomes with orthologs for CSW01_14085 only; 0 genomes with orthologs for CSW01_03215 only