Conservation of cofitness between CSW01_00015 and CSW01_03215 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 1.0 CSW01_03215 ABC transporter ATP-binding protein 0.95 2
Dickeya dadantii 3937 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 DDA3937_RS15995 ABC transporter ATP-binding protein low > 74
Pectobacterium carotovorum WPP14 0.75 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.41 HER17_RS05520 ABC transporter ATP-binding protein low > 75
Shewanella amazonensis SB2B 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) 0.43 Sama_0668 iron(III) ABC transporter, ATP-binding protein (RefSeq)
Dickeya dianthicola ME23 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.35 DZA65_RS17200 ABC transporter ATP-binding protein low > 75
Dickeya dianthicola 67-19 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.35 HGI48_RS16115 ABC transporter ATP-binding protein low > 71
Shewanella oneidensis MR-1 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) 0.47 SO0742 iron(III) ABC transporter, ATP-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) 0.47 Shewana3_3515 ABC transporter related (RefSeq) low > 73
Shewanella loihica PV-4 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) 0.48 Shew_0863 ABC transporter-related protein (RefSeq)
Marinobacter adhaerens HP15 0.68 HP15_3698 tRNA modification GTPase TrmE 0.41 HP15_749 iron(III) ABC transporter, ATP-binding protein
Alteromonas macleodii MIT1002 0.67 MIT1002_04128 tRNA modification GTPase MnmE 0.34 MIT1002_00117 Maltose/maltodextrin import ATP-binding protein MalK
Pseudomonas aeruginosa PA14 0.66 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 IKLFDK_18060 iron ABC transporter ATP-binding protein low > 98
Pseudomonas aeruginosa PUPa3 0.66 DQ20_RS58595 mnmE;go_function=GTPase tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 DQ20_RS41825 ABC transporter ATP-binding protein
Pseudomonas aeruginosa MRSN321 0.66 DY961_RS26185 mnmE;go_function=GTPase tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 DY961_RS15325 ABC transporter ATP-binding protein
Pseudomonas sp. BP01 0.65 JOY50_RS08375 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.39 JOY50_RS14885 ABC transporter ATP-binding protein
Pseudomonas putida KT2440 0.65 PP_0005 GTPase 0.39 PP_1078 putative ABC transporter, ATP-binding protein
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_00178 tRNA modification GTPase MnmE 0.39 GEMAOFIL_01305 Vitamin B12 import ATP-binding protein BtuD
Pseudomonas sp. DMC3 0.64 GFF573 tRNA modification GTPase MnmE 0.39 GFF5103 Vitamin B12 import ATP-binding protein BtuD
Pseudomonas fluorescens SBW25 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 PFLU_RS05675 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_10455 tRNA modification GTPase MnmE 0.39 AO353_04160 iron ABC transporter ATP-binding protein low > 101
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 PFLU_RS05675 ABC transporter ATP-binding protein
Pseudomonas stutzeri RCH2 0.64 Psest_4373 tRNA modification GTPase TrmE 0.37 Psest_1290 ABC-type spermidine/putrescine transport systems, ATPase components
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_11660 tRNA modification GTPase MnmE 0.38 AO356_18270 iron ABC transporter ATP-binding protein
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1933 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.38 Pf1N1B4_763 Ferric iron ABC transporter, ATP-binding protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_5133 tRNA modification GTPase trmE 0.39 Psyr_3902 ABC transporter:TOBE low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_5133 tRNA modification GTPase trmE 0.39 Psyr_3902 ABC transporter:TOBE low > 86
Pseudomonas sp. RS175 0.64 PFR28_04588 tRNA modification GTPase MnmE 0.39 PFR28_03364 Vitamin B12 import ATP-binding protein BtuD
Pseudomonas simiae WCS417 0.64 PS417_28540 tRNA modification GTPase MnmE 0.36 PS417_05590 iron ABC transporter ATP-binding protein
Pseudomonas orientalis W4I3 0.64 QF045_RS02925 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.38 QF045_RS08515 ABC transporter ATP-binding protein low > 93
Pseudomonas segetis P6 0.64 ACVTMO_RS01220 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.41 ACVTMO_RS07115 ABC transporter ATP-binding protein
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.39 PfGW456L13_1738 Ferric iron ABC transporter, ATP-binding protein
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.39 Pf6N2E2_5578 Ferric iron ABC transporter, ATP-binding protein
Pseudomonas sp. SVBP6 0.63 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.39 COO64_RS16820 ABC transporter ATP-binding protein
Pseudomonas sp. S08-1 0.63 OH686_12655 tRNA modification GTPase TrmE 0.38 OH686_20400 Ferric iron ABC transporter, ATP-binding protein
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0373 tRNA modification GTPase TrmE 0.36 B158DRAFT_1227 ABC-type spermidine/putrescine transport systems, ATPase components
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF2437 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.34 GFF662 Ferric iron ABC transporter, ATP-binding protein
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4264 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.37 Ac3H11_3972 Ferric iron ABC transporter, ATP-binding protein low > 79
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS20805 tRNA modification GTPase TrmE 0.38 RR42_RS04350 ABC transporter ATP-binding protein
Dechlorosoma suillum PS 0.45 Dsui_0837 tRNA modification GTPase TrmE 0.36 Dsui_2943 ABC-type spermidine/putrescine transport system, ATPase component low > 51
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_3509 tRNA modification GTPase TrmE 0.26 Echvi_1022 ABC-type spermidine/putrescine transport systems, ATPase components
Agrobacterium fabrum C58 0.28 Atu2832 tRNA modification GTPase 0.35 Atu0406 ABC transporter, nucleotide binding/ATPase protein low > 89
Rhodospirillum rubrum S1H 0.26 Rru_A3624 tRNA modification GTPase TrmE (NCBI) 0.35 Rru_A0767 ABC transporter component (NCBI)
Synechocystis sp000284455 PCC 6803 0.26 SGL_RS08695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.38 SGL_RS10355 ABC transporter ATP-binding protein
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_1582 trmE tRNA modification GTPase TrmE 0.35 Synpcc7942_1406 futC ATPase

Not shown: 76 genomes with orthologs for CSW01_00015 only; 0 genomes with orthologs for CSW01_03215 only