Conservation of cofitness between CSW01_08115 and CSW01_03030 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08115 ribosomal RNA large subunit methyltransferase F 1.0 CSW01_03030 cell division protein ZapE 0.65 3
Shewanella loihica PV-4 0.48 Shew_3741 putative SAM-dependent methyltransferase (RefSeq) 0.59 Shew_3295 AFG1 family ATPase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.46 OH686_17875 23S rRNA (adenine(1618)-N(6))-methyltransferase 0.55 OH686_08425 Cell division protein ZapE — —
Pseudomonas segetis P6 0.46 ACVTMO_RS17435 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 ACVTMO_RS19005 zapE cell division protein ZapE low > 75
Pseudomonas stutzeri RCH2 0.45 Psest_1227 Predicted SAM-dependent methyltransferase 0.55 Psest_0722 Predicted ATPase low > 67
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_17450 23S rRNA methyltransferase 0.55 AO356_17035 ATPase low > 104
Pseudomonas aeruginosa MRSN321 0.45 DY961_RS13675 rlmF;go_function=rRNA 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 DY961_RS24285 zapE;go_function=ATP cell division protein ZapE low > 100
Pseudomonas aeruginosa PUPa3 0.45 DQ20_RS48955 rlmF;go_function=rRNA 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 DQ20_RS56745 zapE;go_function=ATP cell division protein ZapE low > 101
Pseudomonas aeruginosa PA14 0.45 IKLFDK_19780 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 IKLFDK_01900 cell division protein ZapE low > 98
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF702 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.51 GFF2972 ATPase, AFG1 family low > 78
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5416 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.55 Pf6N2E2_5331 ATPase, AFG1 family low > 103
Pseudomonas sp. DMC3 0.44 GFF1948 Ribosomal RNA large subunit methyltransferase F 0.52 GFF4443 Cell division protein ZapE low > 89
Shewanella sp. ANA-3 0.44 Shewana3_0127 putative SAM-dependent methyltransferase (RefSeq) 0.58 Shewana3_0691 AFG1 family ATPase (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.44 HER17_RS17915 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.49 HER17_RS19975 cell division protein ZapE low > 75
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_903 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.55 Pf1N1B4_2969 ATPase, AFG1 family low > 87
Pseudomonas putida KT2440 0.43 PP_0976 Ribosomal RNA large subunit methyltransferase F 0.55 PP_1312 putative enzyme with nucleoside triphosphate hydrolase domain — —
Serratia liquefaciens MT49 0.43 IAI46_07510 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.51 IAI46_22380 cell division protein ZapE low > 87
Escherichia coli ECOR27 0.43 NOLOHH_22580 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 NOLOHH_09615 zapE cell division protein ZapE low > 76
Pseudomonas sp. RS175 0.43 PFR28_03532 Ribosomal RNA large subunit methyltransferase F 0.52 PFR28_03612 Cell division protein ZapE low > 88
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_04555 23S rRNA methyltransferase 0.54 AO353_15185 ATPase low > 101
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2183 Predicted SAM-dependent methyltransferase 0.51 EX28DRAFT_3281 Predicted ATPase low > 76
Pseudomonas sp. BP01 0.43 JOY50_RS11245 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 JOY50_RS15240 zapE cell division protein ZapE low > 84
Escherichia coli BL21 0.43 ECD_00774 23S rRNA m(6)A1618 methyltransferase, SAM-dependent 0.52 ECD_03092 divisome ATPase low > 61
Escherichia coli ECRC62 0.43 BNILDI_20860 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.51 BNILDI_01920 zapE cell division protein ZapE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_02906 Ribosomal RNA large subunit methyltransferase F 0.52 OHPLBJKB_00472 Cell division protein ZapE low > 74
Escherichia coli ECOR38 0.43 HEPCGN_01810 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 HEPCGN_16685 zapE cell division protein ZapE low > 88
Escherichia coli BW25113 0.43 b0807 ybiN orf, hypothetical protein (VIMSS) 0.52 b3232 yhcM conserved protein with nucleoside triphosphate hydrolase domain (NCBI) low > 76
Escherichia coli ECRC99 0.43 KEDOAH_21680 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 KEDOAH_10335 zapE cell division protein ZapE — —
Escherichia coli Nissle 1917 0.43 ECOLIN_RS04295 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 ECOLIN_RS18535 cell division protein ZapE low > 55
Escherichia coli ECRC98 0.43 JDDGAC_09865 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 JDDGAC_21440 zapE cell division protein ZapE low > 87
Enterobacter sp. TBS_079 0.43 MPMX20_01436 Ribosomal RNA large subunit methyltransferase F 0.51 MPMX20_04136 Cell division protein ZapE low > 85
Escherichia fergusonii Becca 0.43 EFB2_03298 Ribosomal RNA large subunit methyltransferase F 0.52 EFB2_00598 Cell division protein ZapE low > 86
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_1710 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 0.55 PfGW456L13_1628 ATPase, AFG1 family low > 87
Escherichia coli ECRC102 0.42 NIAGMN_04275 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 NIAGMN_15575 zapE cell division protein ZapE low > 80
Escherichia coli ECRC101 0.42 MCAODC_25445 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 MCAODC_08335 zapE cell division protein ZapE low > 87
Escherichia coli ECRC100 0.42 OKFHMN_06230 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 OKFHMN_17815 zapE cell division protein ZapE low > 79
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase 0.54 Psyr_4122 AFG1-like ATPase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_1085 23S rRNA m(6)A-1618 methyltransferase 0.54 Psyr_4122 AFG1-like ATPase low > 86
Klebsiella pneumoniae MKP103 0.42 KDGMDA_17215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 KDGMDA_06180 cell division protein ZapE low > 95
Pseudomonas lactucae CFBP13502 0.42 GEMAOFIL_01235 Ribosomal RNA large subunit methyltransferase F 0.52 GEMAOFIL_01030 Cell division protein ZapE low > 96
Pseudomonas simiae WCS417 0.42 PS417_05145 23S rRNA methyltransferase 0.55 PS417_04125 ATPase — —
Pseudomonas orientalis W4I3 0.42 QF045_RS08135 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.56 QF045_RS07125 cell division protein ZapE low > 93
Pseudomonas sp. SVBP6 0.42 COO64_RS04395 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.56 COO64_RS11770 zapE cell division protein ZapE low > 93
Pseudomonas fluorescens SBW25 0.42 PFLU_RS05215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 PFLU_RS04165 cell division protein ZapE low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS05215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.55 PFLU_RS04165 cell division protein ZapE low > 109
Erwinia tracheiphila SCR3 0.41 LU632_RS09435 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 LU632_RS21345 cell division protein ZapE low > 73
Shewanella oneidensis MR-1 0.41 SO_0134 putative SAM-dependent methyltransferase (RefSeq) 0.58 SO3941 conserved hypothetical protein (NCBI ptt file) low > 76
Erwinia amylovora T8 0.41 OLJFJH_16480 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.51 OLJFJH_07000 cell division protein ZapE low > 58
Erwinia tracheiphila HP pepo 2.2 0.41 IJEDHG_19895 rlmF 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.53 IJEDHG_13675 zapE cell division protein ZapE low > 61
Klebsiella michiganensis M5al 0.41 BWI76_RS08955 23S rRNA (adenine(1618)-N(6))-methyltransferase 0.52 BWI76_RS25355 cell division protein ZapE low > 92
Rahnella sp. WP5 0.39 EX31_RS18995 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 EX31_RS12485 cell division protein ZapE low > 89
Pantoea agglomerans CFBP13505 P0401 0.39 PagCFBP13505_RS04105 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.52 PagCFBP13505_RS09415 cell division protein ZapE low > 74
Dechlorosoma suillum PS 0.39 Dsui_3226 putative SAM-dependent methyltransferase 0.42 Dsui_2221 putative ATPase low > 51
Alteromonas macleodii MIT1002 0.39 MIT1002_02912 Ribosomal RNA large subunit methyltransferase F 0.60 MIT1002_00844 AFG1-like ATPase low > 70
Pantoea sp. MT58 0.38 IAI47_13215 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF 0.53 IAI47_17250 cell division protein ZapE low > 76
Shewanella amazonensis SB2B 0.37 Sama_3621 putative SAM-dependent methyltransferase (RefSeq) 0.58 Sama_3072 hypothetical protein (RefSeq) low > 62

Not shown: 7 genomes with orthologs for CSW01_08115 only; 46 genomes with orthologs for CSW01_03030 only