Conservation of cofitness between CSW01_02420 and CSW01_02835 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02420 glutaminase 1.0 CSW01_02835 RNA polymerase sigma factor RpoS 0.61 2
Serratia liquefaciens MT49 0.70 IAI46_21450 glutaminase B 0.70 IAI46_03790 RNA polymerase sigma factor RpoS low > 87
Shewanella loihica PV-4 0.69 Shew_1126 glutaminase (RefSeq) 0.68 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) low > 60
Rahnella sp. WP5 0.69 EX31_RS02720 glutaminase B 0.70 EX31_RS07825 RNA polymerase sigma factor RpoS low > 89
Shewanella amazonensis SB2B 0.68 Sama_2487 Glutaminase (EC 3.5.1.2) (from data) 0.68 Sama_1044 RNA polymerase sigma-38 factor (RefSeq) low > 62
Escherichia coli BL21 0.67 ECD_01481 glutaminase 2 0.70 ECD_02591 RNA polymerase, sigma S (sigma 38) factor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02195 Glutaminase 2 0.70 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 74
Escherichia coli ECRC100 0.67 OKFHMN_01115 glsB glutaminase B 0.70 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS
Escherichia coli ECRC62 0.67 BNILDI_17245 glsB glutaminase B 0.70 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECRC101 0.67 MCAODC_16810 glsB glutaminase B 0.70 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli BW25113 0.67 b1524 yneH predicted glutaminase (NCBI) 0.70 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli ECRC98 0.67 JDDGAC_03625 glsB glutaminase B 0.70 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia fergusonii Becca 0.67 EFB2_02436 Glutaminase 2 0.70 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC102 0.67 NIAGMN_25260 glsB glutaminase B 0.70 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia coli ECOR27 0.67 NOLOHH_18765 glsB glutaminase B 0.70 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 76
Escherichia coli ECOR38 0.67 HEPCGN_26645 glsB glutaminase B 0.70 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 88
Klebsiella pneumoniae MKP103 0.67 KDGMDA_21590 glutaminase B 0.70 KDGMDA_03220 RNA polymerase sigma factor RpoS low > 95
Klebsiella michiganensis M5al 0.67 BWI76_RS15200 glutaminase 0.70 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2512 Glutaminase (EC 3.5.1.2) 0.70 GFF4788 RNA polymerase sigma factor RpoS low > 78
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1196 L-glutaminase (EC 3.5.1.2) 0.70 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_02271 Glutaminase 2 0.70 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85
Shewanella sp. ANA-3 0.64 Shewana3_1184 Glutaminase (EC 3.5.1.2) (from data) 0.66 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO3365 glsA Glutaminase (EC 3.5.1.2) (from data) 0.66 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) low > 76
Pantoea sp. MT58 0.62 IAI47_20610 glutaminase B 0.71 IAI47_04235 RNA polymerase sigma factor RpoS low > 76
Pseudomonas aeruginosa PUPa3 0.61 DQ20_RS53945 glsB;go_function=glutaminase glutaminase B 0.62 DQ20_RS42260 rpoS;go_function=DNA RNA polymerase sigma factor RpoS low > 101
Pseudomonas aeruginosa MRSN321 0.61 DY961_RS19840 glsB;go_function=glutaminase glutaminase B 0.62 DY961_RS14865 rpoS;go_function=DNA RNA polymerase sigma factor RpoS low > 100
Pseudomonas aeruginosa PA14 0.61 IKLFDK_07855 glutaminase B 0.62 IKLFDK_18495 RNA polymerase sigma factor RpoS low > 98
Pseudomonas sp. SVBP6 0.60 COO64_RS07985 glsB glutaminase B 0.63 COO64_RS19795 rpoS RNA polymerase sigma factor RpoS low > 93
Pseudomonas segetis P6 0.59 MPMX49_00172 Glutaminase 2 0.62 MPMX49_03428 RNA polymerase sigma factor RpoS low > 75
Pseudomonas lactucae CFBP13502 0.58 GEMAOFIL_03498 Glutaminase 2 0.62 GEMAOFIL_01443 RNA polymerase sigma factor RpoS low > 96
Pseudomonas simiae WCS417 0.58 PS417_15505 glutaminase 0.62 PS417_06365 RNA polymerase sigma factor low > 88
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_2292 L-glutaminase 0.62 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_2292 L-glutaminase 0.62 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas orientalis W4I3 0.58 QF045_RS17545 glutaminase B 0.62 QF045_RS09210 RNA polymerase sigma factor RpoS low > 93
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS17490 glutaminase B 0.62 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas fluorescens SBW25 0.58 PFLU_RS17490 glutaminase B 0.62 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_26790 Glutaminase (EC 3.5.1.2) (from data) 0.63 AO353_16615 RNA polymerase sigma factor RpoS low > 101
Pseudomonas stutzeri RCH2 0.56 Psest_4081 Glutaminase (EC 3.5.1.2) (from data) 0.61 Psest_2806 RNA polymerase sigma factor RpoS low > 67
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2102 Glutaminase (EC 3.5.1.2) (from data) 0.62 Pf6N2E2_3037 RNA polymerase sigma factor RpoS low > 103
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4436 Glutaminase (EC 3.5.1.2) 0.62 Pf1N1B4_3115 RNA polymerase sigma factor RpoS low > 87
Pseudomonas sp. DMC3 0.56 GFF1705 Glutaminase 2 0.62 GFF2084 RNA polymerase sigma factor RpoS low > 89
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_21690 Glutaminase (EC 3.5.1.2) (from data) 0.62 AO356_05885 RNA polymerase sigma factor RpoS low > 104
Pseudomonas sp. RS175 0.55 PFR28_01340 Glutaminase 2 0.62 PFR28_00427 RNA polymerase sigma factor RpoS low > 88
Pseudomonas sp. S08-1 0.55 OH686_13270 glutaminase A 0.62 OH686_18185 RNA polymerase sigma factor RpoS low > 80
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_05933 L-glutaminase 0.38 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS37220 glutaminase 0.38 QEN71_RS22240 RNA polymerase sigma factor RpoS low > 153
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS27475 glutaminase 0.38 BPHYT_RS09115 RNA polymerase sigma factor RpoS
Paraburkholderia graminis OAS925 0.52 ABIE53_005812 glutaminase 0.38 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor low > 113
Alteromonas macleodii MIT1002 0.51 MIT1002_02828 Glutaminase 2 0.69 MIT1002_00625 RNA polymerase sigma factor RpoS low > 70
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS04140 glutaminase 0.44 HSERO_RS14830 RNA polymerase sigma factor RpoS low > 78
Variovorax sp. SCN45 0.43 GFF3469 Glutaminase (EC 3.5.1.2) 0.34 GFF2842 RNA polymerase sigma factor RpoS low > 127

Not shown: 29 genomes with orthologs for CSW01_02420 only; 12 genomes with orthologs for CSW01_02835 only