Conservation of cofitness between CSW01_05185 and CSW01_02525 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05185 excinuclease ABC subunit UvrB 1.0 CSW01_02525 iron-regulated outer membrane virulence protein 0.68 2
Serratia liquefaciens MT49 0.78 IAI46_06550 excinuclease ABC subunit B 0.40 IAI46_17185 ligand-gated channel protein low > 86
Erwinia tracheiphila SCR3 0.77 LU632_RS09160 uvrB excinuclease ABC subunit B 0.28 LU632_RS00250 cirA catecholate siderophore receptor CirA low > 74
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_19590 uvrB excinuclease ABC subunit UvrB 0.28 IJEDHG_10070 cirA catecholate siderophore receptor CirA low > 61
Pectobacterium carotovorum WPP14 0.77 HER17_RS13420 excinuclease ABC subunit B 0.27 HER17_RS12830 TonB-dependent receptor low > 75
Rahnella sp. WP5 0.77 EX31_RS23720 excinuclease ABC subunit B 0.16 EX31_RS08250 TonB-dependent siderophore receptor low > 89
Pantoea agglomerans CFBP13505 P0401 0.76 PagCFBP13505_RS03805 excinuclease ABC subunit B 0.17 PagCFBP13505_RS08210 TonB-dependent siderophore receptor low > 74
Pantoea sp. MT58 0.76 IAI47_13505 excinuclease ABC subunit B 0.28 IAI47_04670 catecholate siderophore receptor CirA low > 76
Escherichia coli ECRC101 0.76 MCAODC_25595 uvrB excinuclease ABC subunit UvrB 0.27 MCAODC_23465 iha bifunctional siderophore receptor/adhesin Iha low > 88
Escherichia coli ECRC98 0.76 JDDGAC_10015 uvrB excinuclease ABC subunit UvrB 0.27 JDDGAC_07705 iha bifunctional siderophore receptor/adhesin Iha low > 87
Escherichia coli ECOR27 0.76 NOLOHH_22750 uvrB excinuclease ABC subunit UvrB 0.27 NOLOHH_15080 cirA catecholate siderophore receptor CirA low > 76
Escherichia coli BW25113 0.76 b0779 uvrB excinuclease ABC subunit B (NCBI) 0.27 b2155 cirA ferric iron-catecholate outer membrane transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS04150 excinuclease ABC subunit UvrB 0.27 ECOLIN_RS16645 bifunctional siderophore receptor/adhesin Iha low > 55
Escherichia coli BL21 0.76 ECD_00746 exision nuclease of nucleotide excision repair, DNA damage recognition component 0.27 ECD_02084 colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_02934 UvrABC system protein B 0.27 OHPLBJKB_01556 Colicin I receptor low > 74
Escherichia coli ECRC62 0.76 BNILDI_21020 uvrB excinuclease ABC subunit UvrB 0.27 BNILDI_14000 cirA catecholate siderophore receptor CirA low > 75
Escherichia coli ECRC100 0.76 OKFHMN_06380 uvrB excinuclease ABC subunit UvrB 0.27 OKFHMN_04115 iha bifunctional siderophore receptor/adhesin Iha low > 79
Escherichia coli ECRC102 0.76 NIAGMN_04425 uvrB excinuclease ABC subunit UvrB 0.27 NIAGMN_03545 iha bifunctional siderophore receptor/adhesin Iha low > 80
Escherichia coli ECRC99 0.76 KEDOAH_21530 uvrB excinuclease ABC subunit UvrB 0.27 KEDOAH_23655 iha bifunctional siderophore receptor/adhesin Iha — —
Escherichia fergusonii Becca 0.76 EFB2_03326 UvrABC system protein B 0.30 EFB2_04431 Colicin I receptor low > 86
Escherichia coli ECOR38 0.76 HEPCGN_01660 uvrB excinuclease ABC subunit UvrB 0.30 HEPCGN_11000 ireA TonB-dependent siderophore receptor IreA low > 88
Enterobacter asburiae PDN3 0.76 EX28DRAFT_2211 Excinuclease ABC subunit B 0.27 EX28DRAFT_0401 Outer membrane receptor for ferrienterochelin and colicins low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS08530 excinuclease ABC subunit B 0.17 DDA3937_RS17895 TonB-dependent siderophore receptor low > 74
Klebsiella michiganensis M5al 0.76 BWI76_RS08785 excinuclease ABC subunit B 0.27 BWI76_RS19680 catecholate siderophore receptor CirA low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_01408 UvrABC system protein B 0.39 MPMX20_03126 Colicin I receptor low > 85
Klebsiella pneumoniae MKP103 0.75 KDGMDA_17050 excinuclease ABC subunit UvrB 0.27 KDGMDA_26635 catecholate siderophore receptor CirA low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF675 Excinuclease ABC subunit B 0.28 GFF3779 Colicin I receptor precursor low > 78
Alteromonas macleodii MIT1002 0.75 MIT1002_01261 Excinuclease ABC subunit B 0.21 MIT1002_00918 Colicin I receptor precursor low > 70
Shewanella oneidensis MR-1 0.74 SO2506 uvrB excinuclease ABC, B subunit (NCBI ptt file) 0.51 SO_4523 irgA enterobactin receptor protein (RefSeq) low > 76
Shewanella sp. ANA-3 0.74 Shewana3_2166 excinuclease ABC subunit B (RefSeq) 0.50 Shewana3_3929 enterobactin receptor protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_21335 excinuclease ABC subunit B 0.32 AO356_27385 ligand-gated channel protein low > 104
Pseudomonas aeruginosa PA14 0.72 IKLFDK_15985 excinuclease ABC subunit UvrB 0.21 IKLFDK_09395 TonB-dependent receptor low > 100
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_52 Excinuclease ABC subunit B 0.32 Pf6N2E2_872 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins low > 103
Pseudomonas stutzeri RCH2 0.72 Psest_1296 excinuclease ABC, B subunit 0.27 Psest_3341 Outer membrane receptor for ferrienterochelin and colicins low > 67
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS20655 excinuclease ABC subunit B 0.32 PFLU_RS17765 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS20655 excinuclease ABC subunit B 0.32 PFLU_RS17765 TonB-dependent receptor low > 109
Pseudomonas sp. SVBP6 0.72 COO64_RS05730 uvrB excinuclease ABC subunit UvrB 0.45 COO64_RS11375 ligand-gated channel protein low > 93
Pseudomonas putida KT2440 0.72 PP_1974 excinuclease UvrABC protein B 0.17 PP_2242 ferric enterobactin transport system outer membrane subunit — —
Pseudomonas sp. BP01 0.72 JOY50_RS16715 uvrB excinuclease ABC subunit UvrB 0.16 JOY50_RS25375 TonB-dependent siderophore receptor low > 84
Pseudomonas segetis P6 0.71 MPMX49_03091 UvrABC system protein B 0.18 MPMX49_02388 Ferric enterobactin receptor low > 75
Marinobacter adhaerens HP15 0.70 HP15_1372 excinuclease ABC subunit B 0.11 HP15_3002 TonB-dependent receptor low > 73
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_03100 uvrB excinuclease ABC subunit UvrB 0.16 OKGIIK_05420 TonB-dependent receptor low > 53
Acinetobacter baumannii LAC-4 0.67 RR41_RS04945 excinuclease ABC subunit UvrB 0.15 RR41_RS08835 TonB-dependent siderophore receptor low > 55
Acinetobacter radioresistens SK82 0.66 MPMX26_02142 UvrABC system protein B 0.14 MPMX26_02344 Ferric enterobactin receptor low > 36
Ralstonia solanacearum PSI07 0.66 RPSI07_RS19240 excinuclease ABC subunit UvrB 0.09 RPSI07_RS03355 TonB-dependent receptor low > 81
Ralstonia solanacearum UW163 0.66 UW163_RS11690 excinuclease ABC subunit UvrB 0.08 UW163_RS19345 TonB-dependent receptor — —
Ralstonia solanacearum IBSBF1503 0.66 RALBFv3_RS14225 excinuclease ABC subunit UvrB 0.08 RALBFv3_RS19830 TonB-dependent receptor low > 76
Ralstonia solanacearum GMI1000 0.65 RS_RS05005 UvrABC system protein B 0.08 RS_RS20995 TonB-dependent receptor 0.46 21
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4962 Excinuclease ABC subunit B 0.24 GFF3912 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins low > 90
Azospirillum brasilense Sp245 0.61 AZOBR_RS16420 excinuclease ABC subunit B 0.18 AZOBR_RS29530 TonB-dependent receptor low > 97
Sphingobium sp. HT1-2 0.56 GFF700 Excinuclease ABC subunit B 0.36 GFF3042 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins low > 95
Parabacteroides merdae CL09T00C40 0.55 HMPREF1078_RS15855 excinuclease ABC subunit UvrB 0.10 HMPREF1078_RS09720 TonB-dependent receptor low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_1215 excinuclease ABC, B subunit 0.07 Echvi_3755 Outer membrane cobalamin receptor protein low > 79
Bacteroides thetaiotaomicron VPI-5482 0.52 BT0570 excinuclease ABC subunit B (NCBI ptt file) 0.10 BT0496 TonB-dependent receptor (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.52 BACOVA_03714 excinuclease ABC, B subunit 0.09 BACOVA_03823 TonB-dependent receptor low > 96

Not shown: 60 genomes with orthologs for CSW01_05185 only; 2 genomes with orthologs for CSW01_02525 only