Conservation of cofitness between CSW01_03840 and CSW01_02225 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03840 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 1.0 CSW01_02225 arginine deiminase 0.40 16
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2566 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.67 EX28DRAFT_3452 arginine deiminase (EC 3.5.3.6) low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_00996 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.66 MPMX20_00549 Arginine deiminase low > 85
Pantoea sp. MT58 0.73 IAI47_14810 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.64 IAI47_16835 arginine deiminase low > 76
Escherichia fergusonii Becca 0.73 EFB2_03652 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.67 EFB2_04283 Arginine deiminase low > 86
Escherichia coli ECOR38 0.73 HEPCGN_07150 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.67 HEPCGN_10035 arcA arginine deiminase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4304 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.66 GFF937 Arginine deiminase (EC 3.5.3.6) low > 78
Dickeya dianthicola ME23 0.72 DZA65_RS05850 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.65 DZA65_RS02045 arginine deiminase low > 75
Escherichia coli Nissle 1917 0.72 ECOLIN_RS02440 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.67 ECOLIN_RS24655 arginine deiminase — —
Rahnella sp. WP5 0.71 EX31_RS22090 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.63 EX31_RS12810 arginine deiminase low > 89
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3005 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.40 Pf1N1B4_615 Arginine deiminase (EC 3.5.3.6) low > 87
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4883 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.41 PfGW456L13_1874 Arginine deiminase (EC 3.5.3.6) low > 87
Pseudomonas sp. DMC3 0.67 GFF4360 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.40 GFF5163 Arginine deiminase low > 89
Pseudomonas sp. SVBP6 0.67 COO64_RS03845 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.41 COO64_RS04480 arcA arginine deiminase low > 93
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_15785 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.42 AO353_03470 arginine deiminase low > 101
Pseudomonas simiae WCS417 0.67 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase 0.40 PS417_22330 arginine deiminase low > 88
Pseudomonas orientalis W4I3 0.67 QF045_RS25470 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.40 QF045_RS24455 arginine deiminase low > 93
Pseudomonas sp. S08-1 0.67 OH686_17425 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.41 OH686_14340 arginine deiminase low > 80
Pseudomonas putida KT2440 0.67 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.40 PP_1001 arginine deiminase low > 96
Pseudomonas sp. BP01 0.67 JOY50_RS22870 queA tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.41 JOY50_RS11345 arcA arginine deiminase low > 84
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.40 PFLU_RS23970 arginine deiminase low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS24905 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.40 PFLU_RS23970 arginine deiminase low > 109
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_04802 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.39 GEMAOFIL_04602 Arginine deiminase low > 96
Pseudomonas stutzeri RCH2 0.66 Psest_1241 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.45 Psest_0272 arginine deiminase low > 67
Pseudomonas sp. RS175 0.65 PFR28_00276 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.41 PFR28_02178 Arginine deiminase — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3199 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 0.42 Pf6N2E2_2908 Arginine deiminase (EC 3.5.3.6) low > 103
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_06695 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.43 AO356_05270 arginine deiminase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1227 Queuosine biosynthesis protein 0.42 Psyr_2684 arginine deiminase low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1227 Queuosine biosynthesis protein 0.42 Psyr_2684 arginine deiminase low > 86
Pseudomonas aeruginosa PA14 0.64 IKLFDK_19690 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.43 IKLFDK_27630 arginine deiminase low > 98
Pseudomonas aeruginosa MRSN321 0.64 DY961_RS13800 queA;go_function=transferase tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.43 DY961_RS11705 arcA;go_function=arginine arginine deiminase low > 100
Pseudomonas aeruginosa PUPa3 0.64 DQ20_RS43300 queA;go_function=transferase tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.43 DQ20_RS50395 arcA;go_function=arginine arginine deiminase low > 101
Marinobacter adhaerens HP15 0.64 HP15_1478 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.38 HP15_3986 arginine deiminase low > 73
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS26635 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.45 QEN71_RS33035 arginine deiminase low > 153
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS03405 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.40 BPHYT_RS27680 arginine deiminase low > 109
Lysobacter sp. OAE881 0.50 ABIE51_RS15025 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.39 ABIE51_RS10080 arginine deiminase low > 62
Azospirillum brasilense Sp245 0.42 AZOBR_RS06300 S-adenosylmethionine tRNA ribosyltransferase 0.41 AZOBR_RS13255 arginine deiminase low > 97
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_0042 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.28 Echvi_0116 Arginine deiminase — —
Rhizobium sp. OAE497 0.39 ABIE40_RS09430 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.43 ABIE40_RS23735 arginine deiminase low > 107
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS03940 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.16 ABZR88_RS06665 arginine deiminase family protein — —
Dinoroseobacter shibae DFL-12 0.39 Dshi_1180 Queuosine biosynthesis protein (RefSeq) 0.41 Dshi_0432 Arginine deiminase (RefSeq) 0.34 60
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS07505 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.18 CA265_RS10470 amidinotransferase — —
Sinorhizobium meliloti 1021 0.36 SMc01207 S-adenosylmethionine--tRNA ribosyltransferase-isomerase 0.43 SMa0693 arginine deiminase low > 103

Not shown: 77 genomes with orthologs for CSW01_03840 only; 1 genomes with orthologs for CSW01_02225 only