Conservation of cofitness between CSW01_01445 and CSW01_01845 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01445 lysine decarboxylase 1.0 CSW01_01845 protease modulator HflK 0.72 13
Escherichia coli ECOR38 0.78 HEPCGN_11110 cadA lysine decarboxylase CadA 0.49 HEPCGN_10475 hflK FtsH protease activity modulator HflK low > 88
Escherichia coli Nissle 1917 0.78 ECOLIN_RS23905 lysine decarboxylase CadA 0.49 ECOLIN_RS24240 FtsH protease activity modulator HflK low > 55
Escherichia fergusonii Becca 0.78 EFB2_04451 Inducible lysine decarboxylase 0.49 EFB2_04361 Modulator of FtsH protease HflK low > 86
Escherichia coli ECRC99 0.78 KEDOAH_15690 cadA lysine decarboxylase CadA 0.48 KEDOAH_15910 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECRC101 0.78 MCAODC_02985 cadA lysine decarboxylase CadA 0.48 MCAODC_02760 hflK FtsH protease activity modulator HflK low > 88
Escherichia coli ECRC102 0.78 NIAGMN_10320 cadA lysine decarboxylase CadA 0.48 NIAGMN_10095 hflK FtsH protease activity modulator HflK — —
Escherichia coli ECOR27 0.78 NOLOHH_04740 cadA lysine decarboxylase CadA 0.48 NOLOHH_04510 hflK FtsH protease activity modulator HflK low > 76
Escherichia coli ECRC98 0.78 JDDGAC_16110 cadA lysine decarboxylase CadA 0.48 JDDGAC_15885 hflK FtsH protease activity modulator HflK low > 87
Escherichia coli ECRC100 0.78 OKFHMN_12475 cadA lysine decarboxylase CadA 0.48 OKFHMN_12245 hflK FtsH protease activity modulator HflK low > 79
Escherichia coli ECRC62 0.78 BNILDI_06750 cadA lysine decarboxylase CadA 0.48 BNILDI_06980 hflK FtsH protease activity modulator HflK low > 75
Escherichia coli BW25113 0.78 b4131 cadA lysine decarboxylase 1 (NCBI) 0.48 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia coli BL21 0.78 ECD_04002 lysine decarboxylase, acid-inducible 0.48 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03912 Inducible lysine decarboxylase 0.48 OHPLBJKB_03868 Modulator of FtsH protease HflK low > 74
Klebsiella michiganensis M5al 0.78 BWI76_RS07195 lysine decarboxylase CadA 0.45 BWI76_RS02545 protease modulator HflK low > 92
Klebsiella pneumoniae MKP103 0.78 KDGMDA_15475 lysine decarboxylase CadA 0.48 KDGMDA_11045 FtsH protease activity modulator HflK low > 95
Serratia liquefaciens MT49 0.77 IAI46_20145 lysine decarboxylase CadA 0.45 IAI46_01635 FtsH protease activity modulator HflK low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.48 GFF827 HflK protein low > 78
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases 0.48 EX28DRAFT_3371 HflK protein low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_00870 Constitutive lysine decarboxylase 0.46 MPMX20_00455 Modulator of FtsH protease HflK low > 85
Rahnella sp. WP5 0.71 EX31_RS12950 lysine decarboxylase LdcC 0.45 EX31_RS08810 FtsH protease activity modulator HflK 0.60 80
Pantoea sp. MT58 0.70 IAI47_15445 lysine decarboxylase LdcC 0.47 IAI47_02600 FtsH protease activity modulator HflK low > 76
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS13560 lysine decarboxylase LdcC 0.46 PagCFBP13505_RS11195 FtsH protease activity modulator HflK low > 74
Erwinia amylovora T8 0.70 OLJFJH_00545 lysine decarboxylase LdcC 0.44 OLJFJH_02490 FtsH protease activity modulator HflK low > 58
Pseudomonas sp. S08-1 0.39 OH686_03560 Lysine decarboxylase, inducible 0.34 OH686_09460 HflK protein low > 80
Pseudomonas aeruginosa PA14 0.39 IKLFDK_08840 lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA 0.36 IKLFDK_28830 FtsH protease activity modulator HflK — —
Pseudomonas segetis P6 0.38 MPMX49_02802 Biodegradative arginine decarboxylase 0.36 MPMX49_04151 Modulator of FtsH protease HflK low > 75
Pseudomonas stutzeri RCH2 0.38 Psest_2075 Arginine/lysine/ornithine decarboxylases 0.34 Psest_0685 HflK protein — —
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_02693 Biodegradative arginine decarboxylase 0.35 GEMAOFIL_00738 Modulator of FtsH protease HflK low > 93
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.37 Pf1N1B4_1410 HflK protein — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.35 PfGW456L13_152 HflK protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_23560 lysine decarboxylase 0.36 AO353_13155 hypothetical protein low > 101
Pseudomonas fluorescens SBW25 0.38 PFLU_RS12930 lysine decarboxylase 0.36 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS12930 lysine decarboxylase 0.36 PFLU_RS02580 FtsH protease activity modulator HflK low > 109
Pseudomonas simiae WCS417 0.38 PS417_12240 lysine decarboxylase 0.35 PS417_02500 membrane protein — —
Pseudomonas sp. SVBP6 0.37 COO64_RS19270 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.34 COO64_RS17910 hflK FtsH protease activity modulator HflK 0.33 36
Rhizobium sp. OAE497 0.37 ABIE40_RS23760 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.23 ABIE40_RS11535 FtsH protease activity modulator HflK low > 107
Pseudomonas putida KT2440 0.37 PP_4140 lysine decarboxylase 0.34 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Pseudomonas sp. BP01 0.36 JOY50_RS07070 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein 0.34 JOY50_RS17240 hflK FtsH protease activity modulator HflK low > 84
Sinorhizobium meliloti 1021 0.36 SMa0682 decarboxylase (lysine, ornithine, arginine) 0.23 SMc01441 membrane bound protease low > 103
Ralstonia solanacearum PSI07 0.34 RPSI07_RS13045 lysine decarboxylase 0.34 RPSI07_RS18065 FtsH protease activity modulator HflK — —
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS15940 lysine decarboxylase 0.32 RR42_RS13105 membrane protein — —
Dechlorosoma suillum PS 0.34 Dsui_1245 arginine/lysine/ornithine decarboxylase 0.35 Dsui_3135 HflK protein — —
Ralstonia solanacearum UW163 0.34 UW163_RS09345 lysine decarboxylase 0.33 UW163_RS12775 FtsH protease activity modulator HflK — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS04325 lysine decarboxylase 0.33 RALBFv3_RS15310 FtsH protease activity modulator HflK — —
Ralstonia solanacearum GMI1000 0.34 RS_RS11875 lysine decarboxylase 0.31 RS_RS06120 FtsH protease activity modulator HflK — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.33 GFF4856 HflK protein low > 90
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS17280 lysine decarboxylase 0.31 HSERO_RS14765 membrane protein — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase 0.32 ABZR87_RS10950 FtsH protease activity modulator HflK low > 80
Methylophilus sp. DMC18 0.34 GFF1062 Biodegradative arginine decarboxylase 0.32 GFF1223 hypothetical protein — —
Acidovorax sp. GW101-3H11 0.33 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.31 Ac3H11_1801 HflK protein — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase 0.33 ABCV34_RS02660 FtsH protease activity modulator HflK — —
Variovorax sp. SCN45 0.33 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.33 GFF1002 HflK protein low > 127
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_0656 Arginine/lysine/ornithine decarboxylases 0.31 B158DRAFT_1954 protease FtsH subunit HflK low > 40

Not shown: 5 genomes with orthologs for CSW01_01445 only; 33 genomes with orthologs for CSW01_01845 only