Conservation of cofitness between CSW01_00335 and CSW01_01725 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00335 phosphomethylpyrimidine synthase 1.0 CSW01_01725 TetR family transcriptional regulator 0.57 2
Shewanella loihica PV-4 0.74 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.36 Shew_3708 TetR family transcriptional regulator (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.74 MIT1002_00097 Phosphomethylpyrimidine synthase 0.13 MIT1002_02572 HTH-type transcriptional regulator QacR low > 70
Shewanella amazonensis SB2B 0.72 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.35 Sama_0099 TetR family transcriptional regulator (RefSeq) low > 62
Shewanella oneidensis MR-1 0.71 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.38 SO4675 transcriptional regulator, TetR family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.38 Shewana3_4103 TetR family transcriptional regulator (RefSeq) low > 73
Pseudomonas sp. S08-1 0.70 OH686_15885 phosphomethylpyrimidine synthase 0.28 OH686_14175 Transcriptional regulator, AcrR family low > 80
Pseudomonas putida KT2440 0.70 PP_4922 Phosphomethylpyrimidine synthase 0.29 PP_5119 Transcriptional regulator, TetR family low > 96
Pseudomonas sp. DMC3 0.70 GFF3183 Phosphomethylpyrimidine synthase 0.28 GFF232 hypothetical protein low > 89
Marinobacter adhaerens HP15 0.70 HP15_453 thiamine biosynthesis protein thiC 0.27 HP15_3328 transcriptional regulator, TetR family low > 73
Pseudomonas sp. BP01 0.69 JOY50_RS10065 thiC phosphomethylpyrimidine synthase ThiC 0.29 JOY50_RS20790 TetR/AcrR family transcriptional regulator low > 84
Pseudomonas sp. RS175 0.69 PFR28_05091 Phosphomethylpyrimidine synthase 0.28 PFR28_04265 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_08810 thiamine biosynthesis protein ThiC 0.27 AO356_13305 TetR family transcriptional regulator low > 104
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.27 PfGW456L13_986 Transcriptional regulator, TetR family low > 87
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.27 Pf6N2E2_4576 Transcriptional regulator, TetR family low > 103
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.27 Pf1N1B4_2316 Transcriptional regulator, TetR family low > 87
Pseudomonas simiae WCS417 0.69 PS417_02355 thiamine biosynthesis protein ThiC 0.28 PS417_26840 TetR family transcriptional regulator low > 88
Pseudomonas lactucae CFBP13502 0.69 GEMAOFIL_00708 Phosphomethylpyrimidine synthase 0.27 GEMAOFIL_05505 hypothetical protein low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_0544 hydroxymethylpyrimidine synthase 0.28 Psyr_4757 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_0544 hydroxymethylpyrimidine synthase 0.28 Psyr_4757 transcriptional regulator, TetR family low > 86
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_13010 thiamine biosynthesis protein ThiC 0.29 AO353_08285 TetR family transcriptional regulator low > 101
Pseudomonas fluorescens SBW25 0.69 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.28 PFLU_RS28485 TetR/AcrR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.28 PFLU_RS28485 TetR/AcrR family transcriptional regulator low > 109
Acinetobacter radioresistens SK82 0.68 MPMX26_00180 Phosphomethylpyrimidine synthase 0.24 MPMX26_00377 hypothetical protein low > 36
Acinetobacter baumannii LAC-4 0.68 RR41_RS17715 phosphomethylpyrimidine synthase ThiC 0.23 RR41_RS16725 TetR/AcrR family transcriptional regulator low > 55
Echinicola vietnamensis KMM 6221, DSM 17526 0.68 Echvi_3567 thiamine biosynthesis protein ThiC 0.14 Echvi_1257 Transcriptional regulator 0.47 9
Lysobacter sp. OAE881 0.68 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.22 ABIE51_RS12300 TetR/AcrR family transcriptional regulator low > 62
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.22 H281DRAFT_04543 transcriptional regulator, TetR family low > 103
Paraburkholderia graminis OAS925 0.68 ABIE53_002857 phosphomethylpyrimidine synthase 0.22 ABIE53_001566 AcrR family transcriptional regulator low > 113
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS13220 phosphomethylpyrimidine synthase 0.21 BPHYT_RS06505 TetR family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.22 QEN71_RS24285 TetR/AcrR family transcriptional regulator low > 153
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.23 ABZR87_RS15000 TetR/AcrR family transcriptional regulator 0.53 64
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS01290 thiamine biosynthesis protein ThiC 0.23 RR42_RS05390 TetR family transcriptional regulator low > 128
Ralstonia solanacearum UW163 0.65 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.23 UW163_RS10630 TetR family transcriptional regulator
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.23 RALBFv3_RS03095 TetR family transcriptional regulator low > 76
Ralstonia solanacearum GMI1000 0.65 RS_RS00555 phosphomethylpyrimidine synthase 0.23 RS_RS10465 TetR family transcriptional regulator low > 80
Ralstonia solanacearum PSI07 0.65 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.23 RPSI07_RS14210 TetR family transcriptional regulator low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.17 GFF404 Transcriptional regulator, TetR family low > 90
Agrobacterium fabrum C58 0.61 Atu2569 thiamine biosynthesis protein 0.19 Atu1568 transcriptional regulator, TetR family low > 89

Not shown: 73 genomes with orthologs for CSW01_00335 only; 1 genomes with orthologs for CSW01_01725 only