| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03585 | | peptidylprolyl isomerase | 1.0 | CSW01_01710 | | Rsd/AlgQ family anti-sigma factor | 0.50 | 17 |
| Alteromonas macleodii MIT1002 | 0.64 | MIT1002_02740 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.32 | MIT1002_03798 | | Regulator of sigma D | low | > 70 |
| Erwinia amylovora T8 | 0.54 | OLJFJH_01415 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.25 | OLJFJH_06745 | | sigma D regulator | low | > 58 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3634 | | FKBP-type peptidyl-prolyl cis-trans isomerases 2 | 0.27 | EX28DRAFT_4537 | | Regulator of sigma D | low | > 76 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_3134 | | peptidylprolyl isomerase, FKBP-type (RefSeq) | 0.38 | Shewana3_0434 | | anti-RNA polymerase sigma 70 factor (RefSeq) | 0.62 | 13 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_00728 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.29 | MPMX20_00218 | | Regulator of sigma D | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF1128 | | FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) | 0.29 | GFF4197 | | Regulator of sigma D | — | — |
| Shewanella loihica PV-4 | 0.53 | Shew_1101 | | peptidylprolyl isomerase, FKBP-type (RefSeq) | 0.36 | Shew_3423 | | anti-RNA polymerase sigma 70 factor (RefSeq) | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.52 | PagCFBP13505_RS12860 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.31 | PagCFBP13505_RS22615 | | Rsd/AlgQ family anti-sigma factor | — | — |
| Klebsiella pneumoniae MKP103 | 0.52 | KDGMDA_12615 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | KDGMDA_10045 | | sigma D regulator | low | > 95 |
| Shewanella oneidensis MR-1 | 0.52 | SO3530 | fkbP-2 | peptidyl-prolyl cis-trans isomerase FkbP (NCBI ptt file) | 0.39 | SO0433 | rsd | regulator of sigma D (NCBI ptt file) | low | > 76 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_08955 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | HEPCGN_12005 | rsd | sigma D regulator | low | > 88 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_01485 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | MCAODC_03870 | rsd | sigma D regulator | low | > 87 |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_14565 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | JDDGAC_16995 | rsd | sigma D regulator | — | — |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_03300 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | NOLOHH_05515 | rsd | sigma D regulator | low | > 76 |
| Pantoea sp. MT58 | 0.52 | IAI47_16135 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.31 | IAI47_18080 | | Rsd/AlgQ family anti-sigma factor | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS02690 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.25 | LU632_RS00975 | | Rsd/AlgQ family anti-sigma factor | — | — |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_08820 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | NIAGMN_11120 | rsd | sigma D regulator | low | > 80 |
| Erwinia tracheiphila HP pepo 2.2 | 0.52 | IJEDHG_06210 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.25 | IJEDHG_10890 | rsd | sigma D regulator | low | > 61 |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS00140 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | ECOLIN_RS23045 | | sigma D regulator | — | — |
| Escherichia coli BW25113 | 0.52 | b0028 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) (NCBI) | 0.29 | b3995 | rsd | stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.52 | OKFHMN_10970 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | OKFHMN_13370 | rsd | sigma D regulator | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_03629 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.29 | OHPLBJKB_04055 | | Regulator of sigma D | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_04018 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.29 | EFB2_04616 | | Regulator of sigma D | low | > 86 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_08300 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | BNILDI_06010 | rsd | sigma D regulator | — | — |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_17185 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | KEDOAH_14790 | rsd | sigma D regulator | — | — |
| Escherichia coli BL21 | 0.52 | ECD_00032 | | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) | 0.29 | ECD_03872 | | stationary phase protein, binds sigma 70 RNA polymerase subunit | low | > 61 |
| Shewanella amazonensis SB2B | 0.52 | Sama_0926 | | peptidylprolyl isomerase, FKBP-type (RefSeq) | 0.37 | Sama_0386 | | anti-RNA polymerase sigma 70 factor (RefSeq) | — | — |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS04350 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.28 | BWI76_RS01560 | | Rsd/AlgQ family anti-sigma factor | — | — |
| Rahnella sp. WP5 | 0.49 | EX31_RS03860 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.29 | EX31_RS16820 | | Rsd/AlgQ family anti-sigma factor | low | > 89 |
| Serratia liquefaciens MT49 | 0.48 | IAI46_03115 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.32 | IAI46_01325 | | Rsd/AlgQ family anti-sigma factor | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS02880 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.27 | HER17_RS20375 | | Rsd/AlgQ family anti-sigma factor | low | > 75 |
| Dickeya dianthicola ME23 | 0.46 | DZA65_RS19405 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.21 | DZA65_RS01220 | | Rsd/AlgQ family anti-sigma factor | low | > 75 |
| Dickeya dianthicola 67-19 | 0.45 | HGI48_RS18265 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.20 | HGI48_RS01175 | | sigma D regulator | low | > 71 |
| Dickeya dadantii 3937 | 0.44 | DDA3937_RS18330 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.20 | DDA3937_RS01180 | | Rsd/AlgQ family anti-sigma factor | low | > 74 |
| Pseudomonas putida KT2440 | 0.44 | PP_0605 | | peptidylprolyl isomerase | 0.22 | PP_0191 | | Transcriptional regulatory protein AlgQ | — | — |
| Pseudomonas sp. DMC3 | 0.44 | GFF3990 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.25 | GFF353 | | Regulator of sigma D | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_1479 | | FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) | 0.23 | PfGW456L13_861 | | Regulator of sigma D | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_2807 | | FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) | 0.22 | Pf1N1B4_2190 | | Regulator of sigma D | low | > 87 |
| Pseudomonas sp. BP01 | 0.43 | JOY50_RS27080 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.22 | JOY50_RS18725 | | Rsd/AlgQ family anti-sigma factor | low | > 84 |
| Pseudomonas aeruginosa PA14 | 0.43 | IKLFDK_00735 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.26 | IKLFDK_27180 | | Alginate regulatory protein AlgQ | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.43 | DY961_RS23655 | fkpB;go_function=peptidyl-prolyl | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.26 | DY961_RS12155 | rsd;go_process=regulation | sigma D regulator | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.43 | DQ20_RS56120 | fkpB;go_function=peptidyl-prolyl | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.26 | DQ20_RS49965 | rsd;go_process=regulation | sigma D regulator | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0712 | | Peptidylprolyl isomerase, FKBP-type | 0.24 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0712 | | Peptidylprolyl isomerase, FKBP-type | 0.24 | Psyr_0056 | | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.42 | AO353_14150 | | peptidylprolyl isomerase | 0.22 | AO353_08965 | | transcriptional regulator | low | > 101 |
| Pseudomonas sp. S08-1 | 0.42 | OH686_16340 | | FKBP-type peptidyl-prolyl cis-trans isomerase SlpA | 0.26 | OH686_13925 | | Alginate regulatory protein AlgQ, positive transcriptional regulator of AlgD | low | > 80 |
| Pseudomonas segetis P6 | 0.42 | ACVTMO_RS19515 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.27 | ACVTMO_RS22410 | | Rsd/AlgQ family anti-sigma factor | low | > 75 |
| Pseudomonas orientalis W4I3 | 0.42 | QF045_RS06755 | | peptidylprolyl isomerase | 0.21 | QF045_RS01865 | | sigma D regulator | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS03820 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.21 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | — | — |
| Pseudomonas simiae WCS417 | 0.41 | PS417_03770 | | peptidylprolyl isomerase | 0.21 | PS417_27505 | | transcriptional regulator | — | — |
| Pseudomonas sp. SVBP6 | 0.41 | COO64_RS11005 | fkpB | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.20 | COO64_RS01170 | | Rsd/AlgQ family anti-sigma factor | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS03820 | | FKBP-type peptidyl-prolyl cis-trans isomerase | 0.21 | PFLU_RS29185 | | Rsd/AlgQ family anti-sigma factor | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_15850 | | peptidylprolyl isomerase | 0.24 | AO356_12810 | | transcriptional regulator | — | — |
| Marinobacter adhaerens HP15 | 0.41 | HP15_514 | | peptidylprolyl isomerase, FKBP-type | 0.30 | HP15_221 | | anti-RNA polymerase sigma 70 factor | low | > 73 |
| Pseudomonas lactucae CFBP13502 | 0.41 | GEMAOFIL_00959 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.21 | GEMAOFIL_05639 | | Regulator of sigma D | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_5111 | | FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) | 0.24 | Pf6N2E2_4435 | | Regulator of sigma D | low | > 103 |
| Pseudomonas sp. RS175 | 0.41 | PFR28_03762 | | FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase | 0.23 | PFR28_04361 | | Regulator of sigma D | — | — |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_3377 | | FKBP-type peptidyl-prolyl cis-trans isomerases 2 | 0.25 | Psest_3743 | | Regulator of sigma D | low | > 67 |
Not shown: 21 genomes with orthologs for CSW01_03585 only; 0 genomes with orthologs for CSW01_01710 only