Conservation of cofitness between CSW01_09385 and CSW01_01540 in Vibrio cholerae E7946 ATCC 55056

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09385 hypothetical protein 1.0 CSW01_01540 3-phenylpropionate MFS transporter 0.38 20
Klebsiella pneumoniae MKP103 0.76 KDGMDA_19155 UPF0229 protein KPK_3252 0.31 KDGMDA_28325 3-phenylpropionate MFS transporter low > 95
Serratia liquefaciens MT49 0.75 IAI46_14380 YeaH/YhbH family protein 0.34 IAI46_19390 3-phenylpropionate MFS transporter low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_01948 hypothetical protein 0.31 OHPLBJKB_01173 putative 3-phenylpropionic acid transporter low > 74
Klebsiella michiganensis M5al 0.75 BWI76_RS11480 hypothetical protein 0.31 BWI76_RS21195 3-phenylpropionic acid transporter low > 92
Escherichia coli ECOR27 0.75 NOLOHH_17235 yeaH UPF0229 protein YeaH 0.31 NOLOHH_13260 hcaT 3-phenylpropionate MFS transporter — —
Escherichia coli ECRC101 0.75 MCAODC_18705 yeaH UPF0229 protein YeaH 0.31 MCAODC_12120 hcaT 3-phenylpropionate MFS transporter low > 87
Escherichia coli ECRC99 0.75 KEDOAH_01405 yeaH UPF0229 protein YeaH 0.31 KEDOAH_06630 hcaT 3-phenylpropionate MFS transporter — —
Escherichia coli ECRC100 0.75 OKFHMN_26705 yeaH UPF0229 protein YeaH 0.31 OKFHMN_21590 hcaT 3-phenylpropionate MFS transporter low > 79
Escherichia coli ECRC98 0.75 JDDGAC_01280 yeaH UPF0229 protein YeaH 0.31 JDDGAC_25265 hcaT 3-phenylpropionate MFS transporter low > 87
Escherichia coli ECRC102 0.75 NIAGMN_01360 yeaH UPF0229 protein YeaH 0.31 NIAGMN_19360 hcaT 3-phenylpropionate MFS transporter low > 80
Escherichia coli BL21 0.75 ECD_01753 UPF0229 family protein 0.31 ECD_02428 putative 3-phenylpropionic transporter — —
Escherichia coli ECRC62 0.75 BNILDI_16020 yeaH UPF0229 protein YeaH 0.31 BNILDI_12060 hcaT 3-phenylpropionate MFS transporter low > 75
Escherichia coli BW25113 0.75 b1784 yeaH yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.31 b2536 hcaT predicted 3-phenylpropionic transporter (NCBI) low > 76
Escherichia coli ECOR38 0.75 HEPCGN_05095 yeaH UPF0229 protein YeaH 0.31 HEPCGN_20730 hcaT 3-phenylpropionate MFS transporter low > 88
Escherichia fergusonii Becca 0.75 EFB2_02210 hypothetical protein 0.31 EFB2_01354 putative 3-phenylpropionic acid transporter low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS09945 YeaH/YhbH family protein 0.31 ECOLIN_RS14395 3-phenylpropionate MFS transporter 0.36 2
Enterobacter asburiae PDN3 0.74 EX28DRAFT_1777 Uncharacterized conserved protein 0.33 EX28DRAFT_0102 Nucleoside H+ symporter low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_01839 hypothetical protein 0.33 MPMX20_03418 putative 3-phenylpropionic acid transporter low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3472 UPF0229 protein YeaH 0.33 GFF2446 Probable 3-phenylpropionic acid transporter low > 78
Pectobacterium carotovorum WPP14 0.73 HER17_RS11155 YeaH/YhbH family protein 0.32 HER17_RS05955 3-phenylpropionate MFS transporter low > 75
Pantoea sp. MT58 0.73 IAI47_08920 YeaH/YhbH family protein 0.31 IAI47_04965 3-phenylpropionate MFS transporter low > 76
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS02755 YeaH/YhbH family protein 0.30 PagCFBP13505_RS14855 3-phenylpropionate MFS transporter low > 74
Rahnella sp. WP5 0.73 EX31_RS06255 YeaH/YhbH family protein 0.35 EX31_RS20580 3-phenylpropionate MFS transporter low > 89
Dickeya dianthicola 67-19 0.72 HGI48_RS10250 YeaH/YhbH family protein 0.32 HGI48_RS15695 3-phenylpropionate MFS transporter low > 71
Dickeya dadantii 3937 0.71 DDA3937_RS10240 YeaH/YhbH family protein 0.33 DDA3937_RS15595 3-phenylpropionate MFS transporter low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS10725 YeaH/YhbH family protein 0.31 DZA65_RS16770 3-phenylpropionate MFS transporter low > 75
Alteromonas macleodii MIT1002 0.69 MIT1002_01232 hypothetical protein 0.11 MIT1002_01230 putative 3-phenylpropionic acid transporter low > 70
Shewanella oneidensis MR-1 0.68 SO2883 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.16 SO3078 major facilitator family protein, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_1832 hypothetical protein (RefSeq) 0.12 Shew_2415 major facilitator transporter (RefSeq) low > 60
Shewanella amazonensis SB2B 0.66 Sama_1922 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.15 Sama_2158 major facilitator transporter (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_1637 hypothetical protein (RefSeq) 0.15 Shewana3_1470 major facilitator transporter (RefSeq) low > 73
Pseudomonas aeruginosa PUPa3 0.59 DQ20_RS36385 YeaH/YhbH family protein 0.16 DQ20_RS38850 MFS transporter low > 101
Pseudomonas aeruginosa PA14 0.59 IKLFDK_22475 UPF0229 protein PA14_07660 0.16 IKLFDK_10120 MFS transporter low > 98
Pseudomonas aeruginosa MRSN321 0.59 DY961_RS22960 YeaH/YhbH family protein 0.16 DY961_RS16535 MFS transporter low > 100
Pseudomonas sp. BP01 0.58 JOY50_RS18115 YeaH/YhbH family protein 0.14 JOY50_RS15790 MFS transporter low > 84
Pseudomonas sp. SVBP6 0.58 COO64_RS22535 YeaH/YhbH family protein 0.14 COO64_RS06235 MFS transporter low > 93
Pseudomonas putida KT2440 0.57 PP_0396 conserved protein of unknown function 0.14 PP_1831 putative Membrane protein low > 96
Pseudomonas sp. S08-1 0.57 OH686_15015 UPF0229 protein YeaH 0.13 OH686_00680 Nucleoside:H+ symporter:Major facilitator superfamily low > 80
Pseudomonas segetis P6 0.57 MPMX49_00874 hypothetical protein 0.13 MPMX49_02193 putative 3-phenylpropionic acid transporter low > 75
Pseudomonas orientalis W4I3 0.57 QF045_RS00235 YeaH/YhbH family protein 0.17 QF045_RS18045 MFS transporter — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4800 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.13 Pf6N2E2_5823 Nucleoside:H+ symporter:Major facilitator superfamily low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_14310 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) 0.13 AO356_19545 MFS transporter low > 104
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.14 PFLU_RS21275 MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS27490 YeaH/YhbH family protein 0.14 PFLU_RS21275 MFS transporter low > 109
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_05287 hypothetical protein 0.13 GEMAOFIL_02035 putative 3-phenylpropionic acid transporter low > 96
Pseudomonas sp. RS175 0.57 PFR28_04069 hypothetical protein 0.13 PFR28_03125 putative 3-phenylpropionic acid transporter low > 88
Pseudomonas stutzeri RCH2 0.57 Psest_3673 Uncharacterized conserved protein 0.14 Psest_1904 Arabinose efflux permease low > 67
Pseudomonas sp. DMC3 0.57 GFF42 hypothetical protein 0.15 GFF2632 putative 3-phenylpropionic acid transporter low > 89
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2522 FIG002076: hypothetical protein 0.14 Pf1N1B4_3781 Nucleoside:H+ symporter:Major facilitator superfamily low > 87
Pseudomonas simiae WCS417 0.56 PS417_25835 hypothetical protein 0.13 PS417_19310 MFS transporter low > 88
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4632 Protein of unknown function DUF444 0.12 Psyr_1854 Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4632 Protein of unknown function DUF444 0.12 Psyr_1854 Major facilitator superfamily low > 86
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07340 yeaH component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.13 AO353_02245 MFS transporter low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1195 FIG002076: hypothetical protein 0.14 PfGW456L13_4164 Nucleoside:H+ symporter:Major facilitator superfamily low > 87
Variovorax sp. SCN45 0.52 GFF2934 FIG002076: hypothetical protein 0.10 GFF2626 major facilitator superfamily MFS_1 low > 127
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS36480 hypothetical protein 0.12 RR42_RS06490 MFS transporter low > 128
Variovorax sp. OAS795 0.51 ABID97_RS10265 YeaH/YhbH family protein 0.10 ABID97_RS19800 MFS transporter low > 91
Magnetospirillum magneticum AMB-1 0.46 AMB_RS10890 hypothetical protein 0.21 AMB_RS11530 3-phenylpropionate MFS transporter low > 64
Sinorhizobium meliloti 1021 0.41 SMc01266 hypothetical protein 0.15 SMc00172 TARNSPORT protein transmembrane low > 103
Rhizobium sp. OAE497 0.39 ABIE40_RS12545 YeaH/YhbH family protein 0.14 ABIE40_RS10440 MFS transporter low > 107

Not shown: 15 genomes with orthologs for CSW01_09385 only; 8 genomes with orthologs for CSW01_01540 only