Conservation of cofitness between CSW01_06790 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06790 maleylacetoacetate isomerase 1.0 CSW01_01485 transcriptional regulator 0.81 10
Pseudomonas stutzeri RCH2 0.55 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.34 Psest_2126 Transcriptional regulators low > 67
Pseudomonas segetis P6 0.54 MPMX49_02853 Maleylpyruvate isomerase 0.33 MPMX49_02373 HTH-type transcriptional regulator GntR low > 75
Alteromonas macleodii MIT1002 0.53 MIT1002_01149 Maleylpyruvate isomerase 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor low > 70
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS01655 maleylacetoacetate isomerase 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator low > 153
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS01970 maleylacetoacetate isomerase 0.26 RR42_RS22645 GntR family transcriptional regulator low > 128
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_01970 maleylacetoacetate isomerase (EC 5.2.1.2) 0.30 H281DRAFT_05920 transcriptional regulator, LacI family low > 103
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS02805 maleylacetoacetate isomerase 0.32 BPHYT_RS00410 LacI family transcription regulator low > 109
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS06920 maleylacetoacetate isomerase 0.26 ABZR87_RS18255 LacI family DNA-binding transcriptional regulator low > 80
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS05615 maleylacetoacetate isomerase 0.34 HSERO_RS05460 LacI family transcription regulator — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS13685 maleylacetoacetate isomerase 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator low > 48
Ralstonia solanacearum PSI07 0.49 RPSI07_RS22255 maleylacetoacetate isomerase 0.26 RPSI07_RS07575 LacI family DNA-binding transcriptional regulator low > 81
Ralstonia solanacearum GMI1000 0.48 RS_RS01895 maleylacetoacetate isomerase 0.26 RS_RS24865 LacI family DNA-binding transcriptional regulator low > 80
Ralstonia solanacearum UW163 0.48 UW163_RS02530 maleylacetoacetate isomerase 0.24 UW163_RS16860 GntR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS11050 maleylacetoacetate isomerase 0.24 RALBFv3_RS16125 GntR family transcriptional regulator low > 76
Klebsiella michiganensis M5al 0.45 BWI76_RS19575 maleylacetoacetate isomerase 0.51 BWI76_RS26245 transcriptional regulator low > 92
Escherichia coli ECRC62 0.42 BNILDI_14095 maiA maleylacetoacetate isomerase 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia coli ECRC102 0.42 NIAGMN_21370 maiA maleylacetoacetate isomerase 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Xanthobacter sp. DMC5 0.42 GFF4529 Maleylpyruvate isomerase 0.31 GFF1533 HTH-type transcriptional regulator GntR — —
Escherichia coli ECRC101 0.42 MCAODC_14655 maiA maleylacetoacetate isomerase 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC98 0.42 JDDGAC_27560 maiA maleylacetoacetate isomerase 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli ECRC100 0.42 OKFHMN_23605 maiA maleylacetoacetate isomerase 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Escherichia coli ECRC99 0.42 KEDOAH_04580 maiA maleylacetoacetate isomerase 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF4799 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.30 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor low > 78
Variovorax sp. SCN45 0.41 GFF806 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.30 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor low > 127
Acidovorax sp. GW101-3H11 0.41 Ac3H11_2306 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.29 Ac3H11_3230 Gluconate utilization system Gnt-I transcriptional repressor 0.39 35
Variovorax sp. OAS795 0.41 ABID97_RS12400 maleylacetoacetate isomerase 0.29 ABID97_RS01205 LacI family DNA-binding transcriptional regulator low > 91
Azospirillum sp. SherDot2 0.40 MPMX19_02062 Maleylpyruvate isomerase 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR low > 112
Pseudomonas aeruginosa PA14 0.38 IKLFDK_12145 maleylacetoacetate isomerase 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR low > 98
Pseudomonas aeruginosa PUPa3 0.37 DQ20_RS55415 maiA;go_function=maleylacetoacetate maleylacetoacetate isomerase 0.36 DQ20_RS59230 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR low > 101
Pseudomonas aeruginosa MRSN321 0.37 DY961_RS05290 maiA;go_function=maleylacetoacetate maleylacetoacetate isomerase 0.36 DY961_RS17990 gntR;inference=COORDINATES LacI family DNA-binding transcriptional regulator GntR low > 100
Pseudomonas sp. SVBP6 0.37 COO64_RS03645 maiA maleylacetoacetate isomerase 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator low > 93
Pseudomonas sp. BP01 0.37 JOY50_RS15545 maiA maleylacetoacetate isomerase 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator low > 84
Sinorhizobium meliloti 1021 0.35 SMc03206 maleylacetoacetate isomerase (glutathione transferase zeta 1) protein 0.29 SM_b20667 LacI family transcriptional regulator low > 103
Pseudomonas sp. DMC3 0.33 GFF1878 Maleylpyruvate isomerase 0.33 GFF5268 HTH-type transcriptional regulator GntR low > 89
Pseudomonas orientalis W4I3 0.33 QF045_RS08005 maleylacetoacetate isomerase 0.34 QF045_RS24095 LacI family DNA-binding transcriptional regulator low > 93
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.33 AO353_03255 LacI family transcriptional regulator low > 101
Pseudomonas putida KT2440 0.33 PP_4619 Maleylacetoacetate isomerase 0.31 PP_3415 Transcriptional regulator, LacI family low > 96
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor low > 103
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor low > 87
Phaeobacter inhibens DSM 17395 0.32 PGA1_c00380 putative maleylacetoacetate isomerase 0.28 PGA1_c33870 putative HTH-type transcriptional regulator GntR low > 62
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) 0.34 AO356_05065 LacI family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.31 PS417_05025 maleylacetoacetate isomerase 0.33 PS417_21990 LacI family transcriptional regulator low > 88
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_01212 Maleylpyruvate isomerase 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR low > 96
Pseudomonas fluorescens SBW25 0.29 PFLU_RS05095 maleylacetoacetate isomerase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS05095 maleylacetoacetate isomerase 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas sp. RS175 0.29 PFR28_00223 Maleylpyruvate isomerase 0.34 PFR28_00593 HTH-type transcriptional regulator GntR low > 88
Rhizobium sp. OAE497 0.12 ABIE40_RS18710 glutathione S-transferase family protein 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107

Not shown: 22 genomes with orthologs for CSW01_06790 only; 26 genomes with orthologs for CSW01_01485 only