| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_08745 | | TetR/AcrR family transcriptional regulator | 1.0 | CSW01_01465 | | ketohydroxyglutarate aldolase | 0.51 | 8 |
| Shewanella loihica PV-4 | 0.51 | Shew_2052 | | TetR family transcriptional regulator (RefSeq) | 0.43 | Shew_2045 | | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_2155 | | TetR family transcriptional regulator (RefSeq) | 0.43 | Shewana3_2148 | | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.50 | SO2493 | | transcriptional regulator, TetR family (NCBI ptt file) | 0.44 | SO2486 | eda | 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.50 | Sama_1816 | | TetR family transcriptional regulator (RefSeq) | 0.42 | Sama_1809 | | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.44 | MIT1002_01970 | | Stress response protein YttP | 0.42 | MIT1002_02403 | | KHG/KDPG aldolase | — | — |
| Pseudomonas aeruginosa PA14 | 0.36 | IKLFDK_15295 | | transcriptional regulator PsrA | 0.38 | IKLFDK_16165 | | keto-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas lactucae CFBP13502 | 0.36 | GEMAOFIL_01655 | | hypothetical protein | 0.36 | GEMAOFIL_04556 | | 2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas putida KT2440 | 0.36 | PP_2144 | | Transcriptional regulator, TetR family | 0.35 | PP_1024 | | KHG/KDPG aldolase | — | — |
| Pseudomonas aeruginosa MRSN321 | 0.36 | DY961_RS01935 | psrA;inference=COORDINATES | transcriptional regulator PsrA | 0.38 | DY961_RS01030 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas simiae WCS417 | 0.36 | PS417_07615 | | TetR family transcriptional regulator | 0.35 | PS417_22100 | | keto-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas sp. RS175 | 0.35 | PFR28_01118 | | hypothetical protein | 0.36 | PFR28_00575 | | 2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas sp. SVBP6 | 0.35 | COO64_RS09435 | | TetR/AcrR family transcriptional regulator | 0.36 | COO64_RS04600 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | 0.58 | 5 |
| Pseudomonas aeruginosa PUPa3 | 0.35 | DQ20_RS33645 | psrA;inference=COORDINATES | transcriptional regulator PsrA | 0.37 | DQ20_RS34505 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | low | > 101 |
| Pseudomonas sp. BP01 | 0.35 | JOY50_RS25075 | | TetR/AcrR family transcriptional regulator | 0.35 | JOY50_RS11460 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | 0.32 | 58 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS07690 | | helix-turn-helix transcriptional regulator | 0.35 | PFLU_RS23715 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS07690 | | helix-turn-helix transcriptional regulator | 0.35 | PFLU_RS23715 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.35 | AO356_02290 | | TetR family transcriptional regulator | 0.37 | AO356_05150 | | keto-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_00460 | | TetR family transcriptional regulator | 0.35 | AO353_03350 | | keto-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas orientalis W4I3 | 0.35 | QF045_RS10255 | | TetR/AcrR family transcriptional regulator | 0.35 | QF045_RS24235 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.35 | Pf6N2E2_2282 | | Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family | 0.36 | Pf6N2E2_2883 | | 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_4033 | | Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family | 0.35 | PfGW456L13_1903 | | 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) | — | — |
| Pseudomonas stutzeri RCH2 | 0.35 | Psest_2645 | | Transcriptional regulator | 0.39 | Psest_0854 | | Entner-Doudoroff aldolase | — | — |
| Pseudomonas sp. DMC3 | 0.35 | GFF1279 | | hypothetical protein | 0.36 | GFF5138 | | 2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_3282 | | transcriptional regulator, TetR family | 0.35 | Psyr_1122 | | 2-keto-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_3911 | | Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family | 0.36 | Pf1N1B4_587 | | 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_3282 | | transcriptional regulator, TetR family | 0.35 | Psyr_1122 | | 2-keto-3-deoxy-phosphogluconate aldolase | — | — |
| Pseudomonas segetis P6 | 0.34 | MPMX49_02987 | | hypothetical protein | 0.34 | MPMX49_02829 | | 2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Marinobacter adhaerens HP15 | 0.34 | HP15_2262 | | transcriptional Regulator, TetR family protein | 0.40 | HP15_2177 | | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase | low | > 73 |
| Lysobacter sp. OAE881 | 0.26 | ABIE51_RS09405 | | TetR family transcriptional regulator | 0.30 | ABIE51_RS02890 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.25 | LRK54_RS00060 | | TetR/AcrR family transcriptional regulator | 0.35 | LRK54_RS07885 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Rhodanobacter denitrificans MT42 | 0.25 | LRK55_RS18055 | | TetR/AcrR family transcriptional regulator | 0.35 | LRK55_RS07615 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS05465 | | TetR/AcrR family transcriptional regulator | 0.37 | ABZR86_RS14685 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.24 | OKGIIK_07150 | acrR | DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA | 0.35 | OKGIIK_14375 | eda | 2-keto-3-deoxy-6-phosphogluconate aldolase | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.24 | LRK53_RS11205 | | TetR/AcrR family transcriptional regulator | 0.36 | LRK53_RS00660 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_02161 | | TetR-family transcriptional regulator | 0.22 | CCNA_01562 | | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_02161 | | TetR-family transcriptional regulator | 0.22 | CCNA_01562 | | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase | low | > 67 |
| Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS11390 | | TetR/AcrR family transcriptional regulator | 0.34 | ABCV34_RS08610 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | low | > 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.18 | GFF2284 | | transcriptional regulator, TetR family | 0.39 | GFF5496 | | 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) | — | — |
| Pectobacterium carotovorum WPP14 | 0.17 | HER17_RS16470 | | TetR/AcrR family transcriptional regulator | 0.43 | HER17_RS11775 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.17 | HGI48_RS11790 | | TetR family transcriptional regulator | 0.43 | HGI48_RS10170 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | low | > 71 |
| Dickeya dianthicola ME23 | 0.16 | DZA65_RS12330 | | TetR family transcriptional regulator | 0.43 | DZA65_RS10585 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | low | > 75 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.14 | A4249_RS14405 | | TetR/AcrR family transcriptional regulator | 0.23 | A4249_RS10775 | | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | — | — |
| Variovorax sp. SCN45 | 0.14 | GFF3420 | | Transcriptional regulator, AcrR family | 0.37 | GFF6512 | | 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) | low | > 127 |
Not shown: 4 genomes with orthologs for CSW01_08745 only; 64 genomes with orthologs for CSW01_01465 only