Conservation of cofitness between CSW01_01845 and CSW01_01445 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01845 protease modulator HflK 1.0 CSW01_01445 lysine decarboxylase 0.72 6
Escherichia fergusonii Becca 0.49 EFB2_04361 Modulator of FtsH protease HflK 0.78 EFB2_04451 Inducible lysine decarboxylase low > 86
Escherichia coli ECOR38 0.49 HEPCGN_10475 hflK FtsH protease activity modulator HflK 0.78 HEPCGN_11110 cadA lysine decarboxylase CadA low > 88
Escherichia coli Nissle 1917 0.49 ECOLIN_RS24240 FtsH protease activity modulator HflK 0.78 ECOLIN_RS23905 lysine decarboxylase CadA low > 55
Escherichia coli ECRC98 0.48 JDDGAC_15885 hflK FtsH protease activity modulator HflK 0.78 JDDGAC_16110 cadA lysine decarboxylase CadA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03868 Modulator of FtsH protease HflK 0.78 OHPLBJKB_03912 Inducible lysine decarboxylase low > 74
Escherichia coli BL21 0.48 ECD_04041 modulator for HflB protease specific for phage lambda cII repressor 0.78 ECD_04002 lysine decarboxylase, acid-inducible low > 61
Escherichia coli BW25113 0.48 b4174 hflK modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.78 b4131 cadA lysine decarboxylase 1 (NCBI) low > 76
Escherichia coli ECRC62 0.48 BNILDI_06980 hflK FtsH protease activity modulator HflK 0.78 BNILDI_06750 cadA lysine decarboxylase CadA low > 75
Escherichia coli ECRC101 0.48 MCAODC_02760 hflK FtsH protease activity modulator HflK 0.78 MCAODC_02985 cadA lysine decarboxylase CadA low > 87
Escherichia coli ECRC102 0.48 NIAGMN_10095 hflK FtsH protease activity modulator HflK 0.78 NIAGMN_10320 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC100 0.48 OKFHMN_12245 hflK FtsH protease activity modulator HflK 0.78 OKFHMN_12475 cadA lysine decarboxylase CadA low > 79
Escherichia coli ECOR27 0.48 NOLOHH_04510 hflK FtsH protease activity modulator HflK 0.78 NOLOHH_04740 cadA lysine decarboxylase CadA low > 76
Klebsiella pneumoniae MKP103 0.48 KDGMDA_11045 FtsH protease activity modulator HflK 0.78 KDGMDA_15475 lysine decarboxylase CadA low > 95
Escherichia coli ECRC99 0.48 KEDOAH_15910 hflK FtsH protease activity modulator HflK 0.78 KEDOAH_15690 cadA lysine decarboxylase CadA — —
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3371 HflK protein 0.71 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF827 HflK protein 0.77 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 78
Pantoea sp. MT58 0.47 IAI47_02600 FtsH protease activity modulator HflK 0.70 IAI47_15445 lysine decarboxylase LdcC 0.51 53
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS11195 FtsH protease activity modulator HflK 0.70 PagCFBP13505_RS13560 lysine decarboxylase LdcC low > 74
Enterobacter sp. TBS_079 0.46 MPMX20_00455 Modulator of FtsH protease HflK 0.71 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Klebsiella michiganensis M5al 0.45 BWI76_RS02545 protease modulator HflK 0.78 BWI76_RS07195 lysine decarboxylase CadA low > 92
Serratia liquefaciens MT49 0.45 IAI46_01635 FtsH protease activity modulator HflK 0.77 IAI46_20145 lysine decarboxylase CadA low > 87
Rahnella sp. WP5 0.45 EX31_RS08810 FtsH protease activity modulator HflK 0.71 EX31_RS12950 lysine decarboxylase LdcC 0.60 27
Erwinia amylovora T8 0.44 OLJFJH_02490 FtsH protease activity modulator HflK 0.70 OLJFJH_00545 lysine decarboxylase LdcC low > 58
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1410 HflK protein 0.38 Pf1N1B4_4600 Lysine decarboxylase, inducible (EC 4.1.1.18) — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS02580 FtsH protease activity modulator HflK 0.38 PFLU_RS12930 lysine decarboxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS02580 FtsH protease activity modulator HflK 0.38 PFLU_RS12930 lysine decarboxylase low > 109
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS10500 hflK;go_component=outer FtsH protease activity modulator HflK 0.39 DY961_RS20820 ldcA;inference=COORDINATES lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA low > 100
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_13155 hypothetical protein 0.38 AO353_23560 lysine decarboxylase low > 101
Pseudomonas aeruginosa PA14 0.36 IKLFDK_28830 FtsH protease activity modulator HflK 0.39 IKLFDK_08840 lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA — —
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS51555 hflK;go_component=outer FtsH protease activity modulator HflK 0.39 DQ20_RS54900 ldcA;inference=COORDINATES lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA low > 101
Pseudomonas segetis P6 0.36 ACVTMO_RS20590 hflK FtsH protease activity modulator HflK 0.38 ACVTMO_RS13885 Orn/Lys/Arg family decarboxylase low > 75
Dechlorosoma suillum PS 0.35 Dsui_3135 HflK protein 0.34 Dsui_1245 arginine/lysine/ornithine decarboxylase — —
Pseudomonas simiae WCS417 0.35 PS417_02500 membrane protein 0.38 PS417_12240 lysine decarboxylase — —
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_00738 Modulator of FtsH protease HflK 0.38 GEMAOFIL_02693 Biodegradative arginine decarboxylase low > 96
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_152 HflK protein 0.38 PfGW456L13_3336 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 87
Ralstonia solanacearum PSI07 0.34 RPSI07_RS18065 FtsH protease activity modulator HflK 0.34 RPSI07_RS13045 lysine decarboxylase — —
Pseudomonas sp. SVBP6 0.34 COO64_RS17910 hflK FtsH protease activity modulator HflK 0.37 COO64_RS19270 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein low > 93
Pseudomonas sp. S08-1 0.34 OH686_09460 HflK protein 0.39 OH686_03560 Lysine decarboxylase, inducible low > 80
Pseudomonas putida KT2440 0.34 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.37 PP_4140 lysine decarboxylase low > 96
Pseudomonas stutzeri RCH2 0.34 Psest_0685 HflK protein 0.38 Psest_2075 Arginine/lysine/ornithine decarboxylases — —
Pseudomonas sp. BP01 0.34 JOY50_RS17240 hflK FtsH protease activity modulator HflK 0.36 JOY50_RS07070 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein low > 84
Ralstonia solanacearum UW163 0.33 UW163_RS12775 FtsH protease activity modulator HflK 0.34 UW163_RS09345 lysine decarboxylase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS15310 FtsH protease activity modulator HflK 0.34 RALBFv3_RS04325 lysine decarboxylase — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS02660 FtsH protease activity modulator HflK 0.33 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF4856 HflK protein 0.34 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) low > 90
Variovorax sp. SCN45 0.33 GFF1002 HflK protein 0.33 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) low > 127
Methylophilus sp. DMC18 0.32 GFF1223 hypothetical protein 0.34 GFF1062 Biodegradative arginine decarboxylase — —
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS13105 membrane protein 0.34 RR42_RS15940 lysine decarboxylase — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS10950 FtsH protease activity modulator HflK 0.34 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase low > 80
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS14765 membrane protein 0.34 HSERO_RS17280 lysine decarboxylase — —
Ralstonia solanacearum GMI1000 0.31 RS_RS06120 FtsH protease activity modulator HflK 0.34 RS_RS11875 lysine decarboxylase — —
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_1954 protease FtsH subunit HflK 0.15 B158DRAFT_0656 Arginine/lysine/ornithine decarboxylases low > 40
Acidovorax sp. GW101-3H11 0.31 Ac3H11_1801 HflK protein 0.33 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) — —
Sinorhizobium meliloti 1021 0.23 SMc01441 membrane bound protease 0.36 SMa0682 decarboxylase (lysine, ornithine, arginine) low > 103
Rhizobium sp. OAE497 0.23 ABIE40_RS11535 FtsH protease activity modulator HflK 0.37 ABIE40_RS23760 Orn/Lys/Arg decarboxylase N-terminal domain-containing protein low > 107

Not shown: 33 genomes with orthologs for CSW01_01845 only; 6 genomes with orthologs for CSW01_01445 only