| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_02495 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 1.0 | CSW01_01135 | | nucleoid occlusion factor SlmA | 0.40 | 15 |
| Rahnella sp. WP5 | 0.73 | EX31_RS02660 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.66 | EX31_RS14485 | | nucleoid occlusion factor SlmA | low | > 89 |
| Klebsiella michiganensis M5al | 0.72 | BWI76_RS24070 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.65 | BWI76_RS27380 | | nucleoid occlusion factor SlmA | low | > 92 |
| Escherichia coli ECOR38 | 0.72 | HEPCGN_18585 | | Ribosomal RNA small subunit methyltransferase E | 0.64 | HEPCGN_14430 | slmA | nucleoid occlusion factor SlmA | low | > 87 |
| Escherichia coli BW25113 | 0.72 | b2946 | yggJ | orf, hypothetical protein (VIMSS) | 0.64 | b3641 | ttk | putative transcriptional regulator (VIMSS) | low | > 76 |
| Escherichia coli ECRC99 | 0.72 | KEDOAH_08860 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | KEDOAH_12545 | slmA | nucleoid occlusion factor SlmA | — | — |
| Escherichia coli ECRC98 | 0.72 | JDDGAC_22910 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | JDDGAC_19230 | slmA | nucleoid occlusion factor SlmA | 0.58 | 36 |
| Escherichia coli ECOR27 | 0.72 | NOLOHH_11150 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | NOLOHH_07485 | slmA | nucleoid occlusion factor SlmA | low | > 75 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_09730 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | BNILDI_04030 | slmA | nucleoid occlusion factor SlmA | low | > 75 |
| Escherichia coli ECRC102 | 0.72 | NIAGMN_17045 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | NIAGMN_13365 | slmA | nucleoid occlusion factor SlmA | — | — |
| Escherichia coli BL21 | 0.72 | ECD_02776 | | 16S rRNA m(3)U1498 methyltransferase, SAM-dependent | 0.64 | ECD_03498 | | nucleoid occlusion factor, anti-FtsZ division inhibitor | low | > 61 |
| Escherichia fergusonii Becca | 0.72 | EFB2_00956 | | Ribosomal RNA small subunit methyltransferase E | 0.64 | EFB2_00172 | | Nucleoid occlusion factor SlmA | low | > 86 |
| Escherichia coli ECRC100 | 0.72 | OKFHMN_19280 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | OKFHMN_15605 | slmA | nucleoid occlusion factor SlmA | low | > 80 |
| Escherichia coli ECRC101 | 0.72 | MCAODC_09800 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | MCAODC_06115 | slmA | nucleoid occlusion factor SlmA | low | > 87 |
| Escherichia coli Nissle 1917 | 0.72 | ECOLIN_RS16390 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.65 | ECOLIN_RS20745 | | nucleoid occlusion factor SlmA | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.72 | OHPLBJKB_00772 | | Ribosomal RNA small subunit methyltransferase E | 0.64 | OHPLBJKB_00061 | | Nucleoid occlusion factor SlmA | low | > 73 |
| Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_2984 | | RNA methyltransferase, RsmE family | 0.65 | EX28DRAFT_3891 | | transcriptional regulator, TetR family | low | > 76 |
| Pantoea sp. MT58 | 0.70 | IAI47_03620 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.69 | IAI47_00605 | | nucleoid occlusion factor SlmA | low | > 76 |
| Serratia liquefaciens MT49 | 0.70 | IAI46_21385 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.67 | IAI46_24840 | | nucleoid occlusion factor SlmA | low | > 86 |
| Enterobacter sp. TBS_079 | 0.70 | MPMX20_03804 | | Ribosomal RNA small subunit methyltransferase E | 0.69 | MPMX20_00094 | | Nucleoid occlusion factor SlmA | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.69 | LU632_RS05485 | rsmE | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.64 | LU632_RS22010 | slmA | nucleoid occlusion factor SlmA | low | > 74 |
| Erwinia amylovora T8 | 0.69 | OLJFJH_08575 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.68 | OLJFJH_05775 | | nucleoid occlusion factor SlmA | low | > 58 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS18555 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.66 | DDA3937_RS20530 | | nucleoid occlusion factor SlmA | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF3048 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.65 | GFF368 | | Transcriptional regulator SlmA, TetR family | low | > 78 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS19625 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.66 | DZA65_RS00740 | | nucleoid occlusion factor SlmA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS18490 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.66 | HGI48_RS00685 | | nucleoid occlusion factor SlmA | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.67 | HER17_RS02640 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.66 | HER17_RS20845 | | nucleoid occlusion factor SlmA | low | > 75 |
| Shewanella sp. ANA-3 | 0.66 | Shewana3_3444 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | 0.65 | Shewana3_3773 | slmA | nucleoid occlusion protein (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.65 | SO0832 | | conserved hypothetical protein TIGR00046 (NCBI ptt file) | 0.66 | SO4251 | | transcriptional regulator, TetR family (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.64 | Sama_0575 | | 16S ribosomal RNA methyltransferase RsmE (RefSeq) | 0.61 | Sama_0324 | slmA | nucleoid occlusion protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.63 | Shew_3224 | | hypothetical protein (RefSeq) | 0.62 | Shew_3484 | slmA | nucleoid occlusion protein (RefSeq) | — | — |
| Marinobacter adhaerens HP15 | 0.48 | HP15_2926 | | ribosomal RNA small subunit methyltransferase E | 0.49 | HP15_3273 | | nucleoid occlusion protein | 0.73 | 4 |
| Alteromonas macleodii MIT1002 | 0.48 | MIT1002_03054 | | Ribosomal RNA small subunit methyltransferase E | 0.62 | MIT1002_00047 | | Synthetically lethal with a defective Min system protein A | — | — |
| Kangiella aquimarina DSM 16071 | 0.45 | B158DRAFT_0180 | | RNA methyltransferase, RsmE family | 0.52 | B158DRAFT_0784 | | transcriptional regulator, TetR family | low | > 40 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | 0.13 | Psyr_3154 | | transcriptional regulator, TetR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_0453 | | 16S rRNA m(3)U-1498 methyltransferase | 0.13 | Psyr_3154 | | transcriptional regulator, TetR family | low | > 86 |
| Methylophilus sp. DMC18 | 0.41 | GFF2490 | | Ribosomal RNA small subunit methyltransferase E | 0.40 | GFF2481 | | Nucleoid occlusion factor SlmA | — | — |
| Dechlorosoma suillum PS | 0.35 | Dsui_1568 | | RNA methyltransferase, RsmE family | 0.40 | Dsui_1307 | | transcriptional regulator | — | — |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS16855 | | 16S rRNA methyltransferase | 0.39 | BPHYT_RS01600 | | dihydroorotate oxidase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_06311 | | 16S rRNA (uracil1498-N3)-methyltransferase | 0.41 | H281DRAFT_02213 | | transcriptional regulator, TetR family | low | > 103 |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS07745 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.38 | UW163_RS04010 | | nucleoid occlusion factor SlmA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS05880 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.38 | RALBFv3_RS09570 | | nucleoid occlusion factor SlmA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.34 | ABZR87_RS01505 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.38 | ABZR87_RS05180 | | nucleoid occlusion factor SlmA | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_003540 | | 16S rRNA (uracil1498-N3)-methyltransferase | 0.40 | ABIE53_000415 | | TetR/AcrR family transcriptional regulator | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS11365 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.37 | RPSI07_RS23795 | | nucleoid occlusion factor SlmA | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.33 | QEN71_RS27020 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase | 0.39 | QEN71_RS00295 | | nucleoid occlusion factor SlmA | 0.47 | 12 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS17590 | | 16S rRNA methyltransferase | 0.43 | RR42_RS01135 | | dihydroorotate oxidase | — | — |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_4323 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.41 | Ac3H11_1910 | | Transcriptional regulator SlmA, TetR family | — | — |
| Variovorax sp. SCN45 | 0.28 | GFF3255 | | 16S rRNA (uracil(1498)-N(3))-methyltransferase (EC 2.1.1.193) | 0.46 | GFF4623 | | Transcriptional regulator, AcrR family | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF2462 | | Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) | 0.44 | GFF410 | | Transcriptional regulator SlmA, TetR family | — | — |
Not shown: 58 genomes with orthologs for CSW01_02495 only; 1 genomes with orthologs for CSW01_01135 only