Conservation of cofitness between CSW01_03170 and CSW01_01025 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03170 ATP-dependent helicase HrpB 1.0 CSW01_01025 LysE family translocator 0.60 7
Serratia liquefaciens MT49 0.46 IAI46_21195 ATP-dependent helicase HrpB 0.26 IAI46_03210 LysE family translocator low > 87
Erwinia amylovora T8 0.46 OLJFJH_00750 ATP-dependent helicase HrpB 0.27 OLJFJH_01390 lysine transporter LysE low > 58
Enterobacter asburiae PDN3 0.44 EX28DRAFT_3737 ATP-dependent helicase HrpB 0.26 EX28DRAFT_4488 The Resistance to Homoserine/Threonine (RhtB) Family protein low > 76
Rahnella sp. WP5 0.44 EX31_RS03235 ATP-dependent helicase HrpB 0.26 EX31_RS03810 LysE family translocator low > 89
Escherichia coli ECRC101 0.44 MCAODC_00845 hrpB ATP-dependent helicase HrpB 0.27 MCAODC_04860 rhtC threonine export protein RhtC low > 87
Escherichia coli ECRC102 0.44 NIAGMN_08180 hrpB ATP-dependent helicase HrpB 0.27 NIAGMN_12110 rhtC threonine export protein RhtC low > 80
Escherichia coli ECRC99 0.44 KEDOAH_17825 hrpB ATP-dependent helicase HrpB 0.27 KEDOAH_13795 rhtC threonine export protein RhtC — —
Escherichia coli ECRC100 0.44 OKFHMN_10330 hrpB ATP-dependent helicase HrpB 0.27 OKFHMN_14355 rhtC threonine export protein RhtC low > 79
Escherichia coli ECRC98 0.44 JDDGAC_13925 hrpB ATP-dependent helicase HrpB 0.27 JDDGAC_17980 rhtC threonine export protein RhtC low > 87
Enterobacter sp. TBS_079 0.44 MPMX20_00834 ATP-dependent RNA helicase HrpB 0.23 MPMX20_04457 Threonine efflux protein low > 85
Escherichia coli BL21 0.44 ECD_00147 putative ATP-dependent helicase 0.27 ECD_03702 threonine efflux pump low > 61
Escherichia fergusonii Becca 0.44 EFB2_03896 ATP-dependent RNA helicase HrpB 0.27 EFB2_04814 Threonine efflux protein low > 86
Escherichia coli ECOR38 0.44 HEPCGN_08280 hrpB ATP-dependent helicase HrpB 0.27 HEPCGN_13055 rhtC threonine export protein RhtC low > 88
Escherichia coli Nissle 1917 0.44 ECOLIN_RS00830 ATP-dependent helicase HrpB 0.27 ECOLIN_RS21940 threonine export protein RhtC low > 55
Klebsiella michiganensis M5al 0.44 BWI76_RS05030 ATP-dependent helicase 0.26 BWI76_RS01250 threonine export protein RhtC low > 92
Klebsiella pneumoniae MKP103 0.44 KDGMDA_13285 ATP-dependent helicase HrpB 0.25 KDGMDA_09740 threonine export protein RhtC low > 95
Escherichia coli BW25113 0.43 b0148 hrpB helicase, ATP-dependent (VIMSS) 0.27 b3823 rhtC threonine efflux system (NCBI) low > 76
Escherichia coli ECRC62 0.43 BNILDI_08995 hrpB ATP-dependent helicase HrpB 0.27 BNILDI_05045 rhtC threonine export protein RhtC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF84 ATP-dependent helicase HrpB 0.26 GFF249 L-lysine permease low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03514 hypothetical protein 0.27 OHPLBJKB_04228 Threonine efflux protein low > 74
Pectobacterium carotovorum WPP14 0.43 HER17_RS05595 ATP-dependent helicase HrpB 0.25 HER17_RS02915 LysE family translocator low > 75
Escherichia coli ECOR27 0.43 NOLOHH_02675 hrpB ATP-dependent helicase HrpB 0.27 NOLOHH_06485 rhtC threonine export protein RhtC low > 76
Dickeya dianthicola 67-19 0.43 HGI48_RS16035 ATP-dependent helicase HrpB 0.24 HGI48_RS20000 threonine export protein RhtC low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS17120 ATP-dependent helicase HrpB 0.25 DZA65_RS21040 threonine export protein RhtC low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS15920 ATP-dependent helicase HrpB 0.25 DDA3937_RS18300 LysE family translocator low > 74
Pantoea sp. MT58 0.41 IAI47_15620 ATP-dependent helicase HrpB 0.25 IAI47_18355 threonine export protein RhtC low > 76
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS13385 ATP-dependent helicase HrpB 0.25 PagCFBP13505_RS15335 threonine export protein RhtC low > 74
Shewanella oneidensis MR-1 0.39 SO0632 hrpB ATP-dependent helicase HrpB (NCBI ptt file) 0.37 SO0765 threonine efflux protein, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.38 Shewana3_0622 ATP-dependent helicase HrpB (RefSeq) 0.35 Shewana3_3536 lysine exporter protein LysE/YggA (RefSeq) low > 73
Pseudomonas sp. S08-1 0.37 OH686_08800 ATP-dependent helicase HrpB 0.25 OH686_06335 L-lysine permease low > 80
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_5038 ATP-dependent helicase HrpB 0.26 Pf6N2E2_3245 L-lysine permease low > 103
Pseudomonas aeruginosa MRSN321 0.37 DY961_RS13050 hrpB;go_function=helicase ATP-dependent helicase HrpB 0.40 DY961_RS19750 LysE family translocator low > 100
Shewanella amazonensis SB2B 0.37 Sama_2972 ATP-dependent helicase HrpB (RefSeq) 0.28 Sama_1550 threonine efflux protein, putative (RefSeq) low > 62
Pseudomonas simiae WCS417 0.37 PS417_24550 ATP-dependent helicase 0.27 PS417_04535 lysine transporter LysE low > 88
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS48375 hrpB;go_function=helicase ATP-dependent helicase HrpB 0.40 DQ20_RS53860 LysE family translocator low > 101
Pseudomonas aeruginosa PA14 0.36 IKLFDK_20430 ATP-dependent helicase HrpB 0.40 IKLFDK_07765 lysine transporter LysE low > 98
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS26480 ATP-dependent helicase HrpB 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS26480 ATP-dependent helicase HrpB 0.27 PFLU_RS04580 lysine transporter LysE low > 109
Pseudomonas orientalis W4I3 0.36 QF045_RS26835 ATP-dependent helicase HrpB 0.26 QF045_RS07505 LysE family transporter low > 93
Pseudomonas stutzeri RCH2 0.36 Psest_0629 ATP-dependent helicase HrpB 0.28 Psest_3222 Putative threonine efflux protein low > 67
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_05058 ATP-dependent RNA helicase HrpB 0.27 GEMAOFIL_01110 Threonine efflux protein low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS15435 hrpB ATP-dependent helicase HrpB 0.24 COO64_RS03395 LysE family translocator low > 93
Pseudomonas sp. RS175 0.36 PFR28_03833 ATP-dependent RNA helicase HrpB 0.25 PFR28_03621 Threonine efflux protein low > 88
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1395 ATP-dependent helicase HrpB 0.27 PfGW456L13_1618 L-lysine permease low > 87
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15485 ATP-dependent helicase 0.26 AO356_06930 lysine transporter LysE low > 104
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_06300 ATP-dependent helicase 0.26 AO353_15005 lysine transporter LysE low > 101
Pseudomonas sp. DMC3 0.35 GFF3915 ATP-dependent RNA helicase HrpB 0.26 GFF4453 Threonine efflux protein low > 89
Shewanella loihica PV-4 0.35 Shew_3124 ATP-dependent helicase HrpB (RefSeq) 0.34 Shew_1462 lysine exporter protein LysE/YggA (RefSeq) low > 60
Pseudomonas segetis P6 0.35 ACVTMO_RS05405 hrpB ATP-dependent helicase HrpB 0.41 ACVTMO_RS13305 LysE family translocator low > 75
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2728 ATP-dependent helicase HrpB 0.26 Pf1N1B4_2955 L-lysine permease low > 87
Rhizobium sp. OAE497 0.35 ABIE40_RS19515 ATP-dependent helicase HrpB 0.19 ABIE40_RS07035 LysE family transporter 0.28 51
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_4320 ATP-dependent helicase HrpB 0.26 Psyr_2743 Lysine exporter protein (LYSE/YGGA) low > 86
Sinorhizobium meliloti 1021 0.35 SMc02586 ATP-dependent helicase 0.23 SMc02484 amino acid efflux transmembrane protein low > 103
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS13060 ATP-dependent helicase HrpB 0.21 ABZR86_RS11510 homoserine/threonine efflux transporter low > 74
Rhodospirillum rubrum S1H 0.32 Rru_A2365 ATP-dependent helicase HrpB (NCBI) 0.14 Rru_A3712 Lysine exporter protein (LYSE/YGGA) (NCBI) low > 58
Alteromonas macleodii MIT1002 0.28 MIT1002_00406 ATP-dependent RNA helicase HrpB 0.22 MIT1002_02144 Threonine efflux protein low > 70

Not shown: 27 genomes with orthologs for CSW01_03170 only; 4 genomes with orthologs for CSW01_01025 only