Conservation of cofitness between CSW01_11685 and CSW01_00290 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11685 ribosomal RNA large subunit methyltransferase G 1.0 CSW01_00290 gamma carbonic anhydrase family protein 0.55 8
Serratia liquefaciens MT49 0.40 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.66 IAI46_23235 gamma carbonic anhydrase family protein low > 87
Klebsiella michiganensis M5al 0.38 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.67 BWI76_RS25635 gamma carbonic anhydrase family protein low > 92
Pantoea agglomerans CFBP13505 P0401 0.38 PagCFBP13505_RS11560 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.69 PagCFBP13505_RS22570 gamma carbonic anhydrase family protein low > 74
Pantoea sp. MT58 0.37 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 IAI47_02325 gamma carbonic anhydrase family protein low > 76
Erwinia tracheiphila HP pepo 2.2 0.37 IJEDHG_06575 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 IJEDHG_12515 Gamma carbonic anhydrase family protein low > 61
Klebsiella pneumoniae MKP103 0.37 KDGMDA_05550 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 KDGMDA_06505 gamma carbonic anhydrase family protein low > 95
Erwinia tracheiphila SCR3 0.37 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 LU632_RS22435 gamma carbonic anhydrase family protein low > 73
Escherichia coli Nissle 1917 0.37 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 ECOLIN_RS18830 gamma carbonic anhydrase family protein — —
Erwinia amylovora T8 0.37 OLJFJH_02170 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.63 OLJFJH_03675 gamma carbonic anhydrase family protein low > 58
Escherichia coli ECRC102 0.37 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 NIAGMN_15335 yrdA Protein YrdA low > 80
Escherichia coli ECRC99 0.37 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 KEDOAH_10575 yrdA Protein YrdA — —
Escherichia fergusonii Becca 0.37 EFB2_00728 Ribosomal RNA large subunit methyltransferase G 0.65 EFB2_00544 Protein YrdA low > 86
Escherichia coli ECRC101 0.37 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 MCAODC_08095 yrdA Protein YrdA low > 87
Escherichia coli ECRC98 0.37 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 JDDGAC_21195 yrdA Protein YrdA low > 87
Escherichia coli ECRC100 0.37 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 OKFHMN_17575 yrdA Protein YrdA low > 79
Pectobacterium carotovorum WPP14 0.37 HER17_RS18680 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.63 HER17_RS02260 gamma carbonic anhydrase family protein low > 75
Escherichia coli ECOR27 0.37 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 NOLOHH_09365 yrdA Protein YrdA low > 76
Escherichia coli ECRC62 0.37 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 BNILDI_02155 yrdA Protein YrdA low > 75
Escherichia coli BL21 0.36 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 0.65 ECD_03130 bacterial transferase hexapeptide domain protein low > 61
Escherichia coli BW25113 0.36 b3084 ygjO putative enzyme (VIMSS) 0.65 b3279 yrdA putative transferase (VIMSS) low > 76
Escherichia coli ECOR38 0.36 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.65 HEPCGN_16395 yrdA Protein YrdA low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G 0.65 OHPLBJKB_00424 Protein YrdA low > 74
Rahnella sp. WP5 0.36 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.66 EX31_RS15945 gamma carbonic anhydrase family protein low > 89
Dickeya dadantii 3937 0.36 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.64 DDA3937_RS19090 gamma carbonic anhydrase family protein low > 74
Alteromonas macleodii MIT1002 0.36 MIT1002_00689 Ribosomal RNA large subunit methyltransferase G 0.68 MIT1002_00030 carnitine operon protein CaiE low > 70
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3153 16S RNA G1207 methylase RsmC 0.65 EX28DRAFT_0048 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily low > 76
Shewanella amazonensis SB2B 0.35 Sama_2548 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.70 Sama_0054 carbonic anhydrase (RefSeq) low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.67 GFF2399 carbonic anhydrase, family 3 low > 78
Pseudomonas sp. S08-1 0.35 OH686_16135 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.66 OH686_12365 Protein YrdA low > 80
Enterobacter sp. TBS_079 0.35 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G 0.66 MPMX20_04187 Protein YrdA low > 85
Shewanella oneidensis MR-1 0.34 SO1097 conserved hypothetical protein (NCBI ptt file) 0.70 SO0042 carbonic anhydrase, family 3 (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.34 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.63 DZA65_RS20305 gamma carbonic anhydrase family protein low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.63 HGI48_RS19180 gamma carbonic anhydrase family protein low > 71
Shewanella sp. ANA-3 0.34 Shewana3_0932 methyltransferase small (RefSeq) 0.69 Shewana3_0045 carbonic anhydrase (RefSeq) low > 73
Pseudomonas sp. RS175 0.34 PFR28_03798 Ribosomal RNA large subunit methyltransferase G 0.68 PFR28_04700 Protein YrdA low > 88
Pseudomonas stutzeri RCH2 0.34 Psest_3440 16S RNA G1207 methylase RsmC 0.65 Psest_4319 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily low > 67
Shewanella loihica PV-4 0.33 Shew_2886 rRNA (guanine-N(2)-)-methyltransferase (RefSeq) 0.67 Shew_3725 carbonic anhydrase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_13950 50S rRNA methyltransferase 0.67 AO353_10770 anhydrase low > 101
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.68 Pf6N2E2_4090 carbonic anhydrase, family 3 low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.63 Psyr_0044 transferase hexapeptide repeat protein — —
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS26260 class I SAM-dependent methyltransferase 0.67 PFLU_RS00235 gamma carbonic anhydrase family protein low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS26260 class I SAM-dependent methyltransferase 0.67 PFLU_RS00235 gamma carbonic anhydrase family protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15650 50S rRNA methyltransferase 0.67 AO356_11115 anhydrase low > 104
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.63 Psyr_0044 transferase hexapeptide repeat protein low > 86
Pseudomonas sp. SVBP6 0.33 COO64_RS02900 methyltransferase 0.66 COO64_RS02330 gamma carbonic anhydrase family protein low > 93
Pseudomonas aeruginosa PA14 0.33 IKLFDK_00425 Ribosomal RNA large subunit methyltransferase G 0.67 IKLFDK_25220 gamma carbonic anhydrase family protein low > 98
Pseudomonas orientalis W4I3 0.33 QF045_RS26630 class I SAM-dependent methyltransferase 0.65 QF045_RS03185 gamma carbonic anhydrase family protein low > 93
Pseudomonas segetis P6 0.33 MPMX49_03986 Ribosomal RNA large subunit methyltransferase G 0.67 MPMX49_00360 Protein YrdA low > 75
Pseudomonas simiae WCS417 0.32 PS417_24335 50S rRNA methyltransferase 0.66 PS417_00240 anhydrase low > 88
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.65 PfGW456L13_625 carbonic anhydrase, family 3 low > 87
Pseudomonas aeruginosa PUPa3 0.32 DQ20_RS55805 class I SAM-dependent methyltransferase 0.67 DQ20_RS31165 gamma carbonic anhydrase family protein low > 101
Pseudomonas aeruginosa MRSN321 0.32 DY961_RS23340 class I SAM-dependent methyltransferase 0.67 DY961_RS26595 gamma carbonic anhydrase family protein low > 100
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05020 Ribosomal RNA large subunit methyltransferase G 0.66 GEMAOFIL_00253 Protein YrdA low > 96
Pseudomonas sp. BP01 0.32 JOY50_RS15705 methyltransferase 0.65 JOY50_RS21250 gamma carbonic anhydrase family protein low > 84
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.66 Pf1N1B4_1843 carbonic anhydrase, family 3 low > 87
Pseudomonas sp. DMC3 0.32 GFF3948 Ribosomal RNA large subunit methyltransferase G 0.66 GFF664 Protein YrdA low > 89
Pseudomonas putida KT2440 0.32 PP_4648 Ribosomal RNA large subunit methyltransferase G 0.66 PP_0095 putative enzyme of unknown function low > 96
Marinobacter adhaerens HP15 0.18 HP15_2265 rRNA (guanine-N2-)-methyltransferase, RsmD 0.58 HP15_3758 transferase hexapeptide repeat protein low > 73

Not shown: 0 genomes with orthologs for CSW01_11685 only; 59 genomes with orthologs for CSW01_00290 only