Conservation of cofitness between CCNA_00200 and CCNA_02489 in Caulobacter crescentus NA1000 Δfur

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_00200 2OG-Fe(II) oxygenase superfamily protein 1.0 CCNA_02489 acetate/3-ketoacid CoA transferase, subunit B 0.56 20
Caulobacter crescentus NA1000 1.00 CCNA_00200 2OG-Fe(II) oxygenase superfamily protein 1.00 CCNA_02489 acetate/3-ketoacid CoA transferase, subunit B low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS13235 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 0.69 A4249_RS02955 3-oxoacid CoA-transferase subunit B low > 48
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_2712 Isopenicillin N synthase and related dioxygenases 0.73 Ga0059261_0263 3-oxoacid CoA-transferase, B subunit low > 68
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1970.1 Oxidoreductase 0.66 Xcc-8004.4477.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 74
Lysobacter sp. OAE881 0.49 ABIE51_RS08285 isopenicillin N synthase family oxygenase 0.65 ABIE51_RS04385 CoA transferase subunit B low > 62
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS17485 isopenicillin N synthase family oxygenase 0.63 LRK54_RS04080 3-oxoacid CoA-transferase subunit B low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS17705 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 0.63 LRK55_RS03850 3-oxoacid CoA-transferase subunit B low > 63
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS17165 flavonol synthase 0.64 CA265_RS06310 succinyl-CoA--3-ketoacid-CoA transferase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_17930 flavonol synthase 0.62 CA264_04620 succinyl-CoA--3-ketoacid-CoA transferase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS20080 isopenicillin N synthase family oxygenase 0.60 ABZR88_RS05195 3-oxoacid CoA-transferase subunit B low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_1457 Isopenicillin N synthase and related dioxygenases 0.63 Echvi_3271 3-oxoacid CoA-transferase, B subunit low > 79
Pseudomonas stutzeri RCH2 0.24 Psest_1401 Isopenicillin N synthase and related dioxygenases 0.67 Psest_1077 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) low > 67
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS02290 isopenicillin N synthase 0.60 HSERO_RS23185 succinyl-CoA:3-ketoacid-CoA transferase low > 78
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_3477 2-Oxobutyrate oxidase, putative 0.62 Pf6N2E2_2112 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit B (from data) low > 103
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_15 2-Oxobutyrate oxidase, putative 0.15 PfGW456L13_4591 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_08020 2OG-Fe(II) oxygenase 0.62 AO356_21645 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0662 2OG-Fe(II) oxygenase superfamily 0.61 Psyr_3238 3-oxoacid CoA-transferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_1251 2-Oxobutyrate oxidase, putative 0.62 Pf1N1B4_5834 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0662 2OG-Fe(II) oxygenase superfamily 0.61 Psyr_3238 3-oxoacid CoA-transferase low > 86
Shewanella oneidensis MR-1 0.21 SO2589 oxidoreductase, iron/ascorbate family (NCBI ptt file) 0.62 SO1891 3-oxoadipate CoA-succinyl transferase, beta subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.20 Shewana3_2394 2OG-Fe(II) oxygenase (RefSeq) 0.61 Shewana3_1666 butyryl-CoA:acetate CoA transferase (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.20 MPMX26_00937 hypothetical protein 0.64 MPMX26_02381 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B
Pseudomonas sp. RS175 0.20 PFR28_01453 Validamycin A dioxygenase 0.62 PFR28_01324 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 88
Alteromonas macleodii MIT1002 0.20 MIT1002_03500 2OG-Fe(II) oxygenase superfamily protein 0.56 MIT1002_02000 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B low > 70
Shewanella loihica PV-4 0.20 Shew_1590 2OG-Fe(II) oxygenase (RefSeq) 0.61 Shew_2576 3-oxoacid CoA-transferase, B subunit (RefSeq) low > 60
Azospirillum sp. SherDot2 0.19 MPMX19_06880 Validamycin A dioxygenase 0.48 MPMX19_03463 Butyrate--acetoacetate CoA-transferase subunit B
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1151 2-Oxobutyrate oxidase, putative 0.57 GFF5196 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
Shewanella amazonensis SB2B 0.19 Sama_1992 isopenicillin-N synthase (RefSeq) 0.62 Sama_0519 3-oxoacid CoA-transferase (RefSeq) low > 62
Klebsiella michiganensis M5al 0.19 BWI76_RS21890 oxidoreductase 0.44 BWI76_RS16140 3-oxoadipate CoA-transferase low > 92
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS07780 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 0.68 QEN71_RS05250 CoA transferase subunit B low > 153
Acidovorax sp. GW101-3H11 0.17 Ac3H11_3734 Oxidoreductase 0.61 Ac3H11_131 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)
Variovorax sp. SCN45 0.17 GFF3711 oxidoreductase, 2OG-Fe(II) oxygenase family 0.61 GFF7372 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) low > 127
Variovorax sp. OAS795 0.17 ABID97_RS07660 isopenicillin N synthase family oxygenase 0.61 ABID97_RS19435 3-oxoacid CoA-transferase subunit B
Rhodospirillum rubrum S1H 0.16 Rru_A0775 2OG-Fe(II) oxygenase (NCBI) 0.45 Rru_A1471 Butyrate-acetoacetate CoA-transferase (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.14 Dshi_1377 2OG-Fe(II) oxygenase (RefSeq) 0.69 Dshi_1134 3-oxoacid CoA-transferase, B subunit (RefSeq) low > 64

Not shown: 4 genomes with orthologs for CCNA_00200 only; 34 genomes with orthologs for CCNA_02489 only