| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Caulobacter crescentus NA1000 Δfur | 1.0 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 1.0 | CCNA_01446 | | LL-diaminopimelate aminotransferase | 0.68 | 8 |
| Caulobacter crescentus NA1000 | 1.00 | CCNA_03517 | | cytochrome c oxidase polypeptide I coxA | 1.00 | CCNA_01446 | | LL-diaminopimelate aminotransferase | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.82 | A4249_RS00110 | | cytochrome c oxidase subunit I | 0.61 | A4249_RS02425 | | LL-diaminopimelate aminotransferase | low | > 48 |
| Agrobacterium fabrum C58 | 0.72 | Atu0768 | | cytochrome-c oxidase chain I | 0.67 | Atu1589 | | aminotransferase, class I | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.71 | TX73_004290 | | cytochrome c oxidase subunit I | 0.65 | TX73_012935 | | LL-diaminopimelate aminotransferase | low | > 86 |
| Rhizobium sp. OAE497 | 0.70 | ABIE40_RS04065 | | cytochrome c oxidase subunit I | 0.68 | ABIE40_RS08645 | | LL-diaminopimelate aminotransferase | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.69 | SMc00010 | | cytochrome C oxidase polypeptide I transmembrane protein | 0.69 | SMc00294 | | aminotransferase | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.68 | Ga0059261_2008 | | cytochrome c oxidase, subunit I | 0.61 | Ga0059261_1288 | | Aspartate/tyrosine/aromatic aminotransferase | low | > 68 |
| Azospirillum brasilense Sp245 | 0.67 | AZOBR_RS10585 | | cytochrome C oxidase subunit I | 0.64 | AZOBR_RS07830 | | aminotransferase | — | — |
| Bosea sp. OAE506 | 0.66 | ABIE41_RS22950 | | cytochrome c oxidase subunit I | 0.68 | ABIE41_RS19175 | | LL-diaminopimelate aminotransferase | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.66 | AMB_RS10960 | | cytochrome c oxidase subunit I | 0.66 | AMB_RS18860 | | pyridoxal phosphate-dependent aminotransferase | low | > 64 |
| Azospirillum sp. SherDot2 | 0.66 | MPMX19_00885 | | Cytochrome c oxidase subunit 1 | 0.65 | MPMX19_00804 | | Glutamate-pyruvate aminotransferase AlaC | — | — |
| Ralstonia solanacearum PSI07 | 0.53 | RPSI07_RS22360 | | cytochrome c oxidase subunit I | 0.16 | RPSI07_RS17155 | | succinyldiaminopimelate transaminase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS02630 | | cytochrome c oxidase subunit I | 0.16 | UW163_RS13650 | | succinyldiaminopimelate transaminase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS10950 | | cytochrome c oxidase subunit I | 0.16 | RALBFv3_RS00320 | | succinyldiaminopimelate transaminase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS01790 | | cytochrome c oxidase subunit I | 0.16 | RS_RS06990 | | succinyldiaminopimelate transaminase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS06800 | | cytochrome c oxidase subunit I | 0.17 | ABZR87_RS11770 | | succinyldiaminopimelate transaminase | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF689 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.17 | GFF4553 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.52 | ABCV34_RS13270 | | cytochrome c oxidase subunit I | 0.53 | ABCV34_RS02290 | | alanine transaminase | low | > 48 |
| Variovorax sp. SCN45 | 0.52 | GFF2298 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.16 | GFF254 | | N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 | low | > 127 |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS20785 | | cytochrome oxidase subunit I | 0.53 | HSERO_RS12800 | | aspartate aminotransferase | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_3891 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.51 | Ac3H11_3720 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 79 |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS01880 | | cytochrome oxidase subunit I | 0.51 | RR42_RS28540 | | glutamate--pyruvate aminotransferase | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS01500 | | cytochrome c oxidase subunit I | 0.15 | QEN71_RS06370 | | succinyldiaminopimelate transaminase | low | > 153 |
| Pseudomonas simiae WCS417 | 0.50 | PS417_00305 | | cytochrome oxidase subunit I | 0.51 | PS417_21975 | | glutamate-pyruvate aminotransferase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.50 | PFLU_RS23580 | | alanine transaminase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS00295 | | cytochrome c oxidase subunit I | 0.50 | PFLU_RS23580 | | alanine transaminase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_10835 | | cytochrome oxidase subunit I | 0.51 | AO353_03235 | | glutamate-pyruvate aminotransferase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.49 | Pf6N2E2_4099 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.51 | Pf6N2E2_2862 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 103 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_12320 | | cytochrome c oxidase, subunit I | 0.50 | OH686_04000 | | Glutamate-pyruvate aminotransferase AlaC | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_11165 | | cytochrome oxidase subunit I | 0.51 | AO356_05050 | | glutamate-pyruvate aminotransferase | low | > 104 |
| Pseudomonas sp. RS175 | 0.49 | PFR28_04690 | | Cytochrome c oxidase subunit 1 | 0.50 | PFR28_00596 | | Glutamate-pyruvate aminotransferase AlaC | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.49 | Psest_4327 | | cytochrome c oxidase, subunit I | 0.16 | Psest_1470 | | succinyldiaminopimelate transaminase | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.49 | PfGW456L13_614 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.51 | PfGW456L13_1928 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 87 |
| Pseudomonas putida KT2440 | 0.49 | PP_0104 | | Cytochrome c oxidase subunit 1 | 0.50 | PP_0817 | | aminotransferase | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_1854 | | Cytochrome c oxidase polypeptide I (EC 1.9.3.1) | 0.51 | Pf1N1B4_555 | | Uncharacterized PLP-dependent aminotransferase YfdZ | low | > 87 |
| Synechococcus elongatus PCC 7942 | 0.43 | Synpcc7942_2603 | ctaD | Cytochrome-c oxidase | 0.36 | Synpcc7942_1794 | | succinyldiaminopimelate transaminase | low | > 38 |
| Desulfovibrio vulgaris Miyazaki F | 0.39 | DvMF_0536 | | cytochrome c oxidase, subunit I (RefSeq) | 0.52 | DvMF_1411 | | aminotransferase class I and II (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.38 | DVU1815 | | cytochrome c oxidase, subunit I, putative (TIGR) | 0.53 | DVU0891 | | aminotransferase, classes I and II (TIGR) | low | > 55 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.38 | CA264_13925 | | cytochrome c oxidase subunit I | 0.21 | CA264_01550 | | aminotransferase | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.37 | Echvi_2103 | | Heme/copper-type cytochrome/quinol oxidases, subunit 1 | 0.28 | Echvi_0124 | | Aspartate/tyrosine/aromatic aminotransferase | — | — |
Not shown: 21 genomes with orthologs for CCNA_03517 only; 38 genomes with orthologs for CCNA_01446 only