Conservation of cofitness between CCNA_02601 and CCNA_00090 in Caulobacter crescentus NA1000 Δfur

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase 1.0 CCNA_00090 UDP-glucose 4-epimerase 0.69 9
Caulobacter crescentus NA1000 1.00 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase 1.00 CCNA_00090 UDP-glucose 4-epimerase low > 66
Dinoroseobacter shibae DFL-12 0.77 Dshi_0103 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (RefSeq) 0.37 Dshi_3868 UDP-glucose 4-epimerase (RefSeq) low > 64
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS12345 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.36 RALBFv3_RS18435 UDP-glucose 4-epimerase GalE low > 76
Ralstonia solanacearum UW163 0.77 UW163_RS01260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.36 UW163_RS20695 UDP-glucose 4-epimerase GalE — —
Ralstonia solanacearum GMI1000 0.77 RS_RS17530 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.37 RS_RS22435 UDP-glucose 4-epimerase GalE low > 80
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS08285 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.36 ABZR87_RS19470 UDP-glucose 4-epimerase GalE low > 80
Ralstonia solanacearum PSI07 0.76 RPSI07_RS20965 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.36 RPSI07_RS05120 UDP-glucose 4-epimerase GalE low > 81
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS25775 alcohol dehydrogenase 0.35 RR42_RS35875 UDP-galactose-4-epimerase — —
Paraburkholderia graminis OAS925 0.75 ABIE53_003402 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase 0.36 ABIE53_001185 UDP-glucose 4-epimerase low > 113
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS16150 alcohol dehydrogenase 0.37 BPHYT_RS04450 UDP-glucose 4-epimerase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04166 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase 0.36 H281DRAFT_00074 UDP-galactose 4-epimerase low > 103
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS02555 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.36 QEN71_RS25435 UDP-glucose 4-epimerase GalE low > 153
Variovorax sp. SCN45 0.74 GFF2941 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.40 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) low > 127
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS13615 alcohol dehydrogenase 0.39 HSERO_RS22045 UDP-glucose 4-epimerase low > 78
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily 0.35 Psyr_2704 UDP-galactose 4-epimerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily 0.35 Psyr_2704 UDP-galactose 4-epimerase low > 86
Pseudomonas stutzeri RCH2 0.67 Psest_2816 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.39 Psest_0069 UDP-glucose-4-epimerase low > 67
Shewanella oneidensis MR-1 0.66 SO2054 adhC alcohol dehydrogenase class III (NCBI ptt file) 0.37 SO1664 galE UDP-glucose 4-epimerase (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS17270 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.35 LU632_RS08830 galE UDP-glucose 4-epimerase GalE low > 74
Pantoea sp. MT58 0.66 IAI47_06705 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.36 IAI47_07000 UDP-glucose 4-epimerase GalE low > 76
Acinetobacter radioresistens SK82 0.66 MPMX26_01472 S-(hydroxymethyl)glutathione dehydrogenase 0.38 MPMX26_00066 UDP-glucose 4-epimerase low > 36
Shewanella sp. ANA-3 0.65 Shewana3_1837 alcohol dehydrogenase (RefSeq) 0.37 Shewana3_2783 UDP-galactose 4-epimerase (RefSeq) low > 73
Dickeya dianthicola ME23 0.65 DZA65_RS09655 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 DZA65_RS06990 UDP-glucose 4-epimerase GalE low > 75
Dickeya dianthicola 67-19 0.65 HGI48_RS09350 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 HGI48_RS06635 UDP-glucose 4-epimerase GalE low > 71
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1257 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.39 EX28DRAFT_2236 UDP-glucose-4-epimerase GalE 0.60 13
Shewanella loihica PV-4 0.65 Shew_1540 alcohol dehydrogenase (RefSeq) 0.38 Shew_2285 UDP-glucose 4-epimerase (RefSeq) low > 60
Enterobacter sp. TBS_079 0.65 MPMX20_02209 S-(hydroxymethyl)glutathione dehydrogenase 0.39 MPMX20_01386 UDP-glucose 4-epimerase 0.18 33
Alteromonas macleodii MIT1002 0.64 MIT1002_03089 S-(hydroxymethyl)glutathione dehydrogenase 0.40 MIT1002_00970 UDP-glucose 4-epimerase 0.81 31
Shewanella amazonensis SB2B 0.63 Sama_0004 alcohol dehydrogenase, zinc-binding (RefSeq) 0.41 Sama_2224 UDP-glucose 4-epimerase (RefSeq) low > 62
Lysobacter sp. OAE881 0.63 ABIE51_RS18925 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.38 ABIE51_RS04290 UDP-glucose 4-epimerase GalE low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2617 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.38 GFF652 UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) / UDP-glucose 4-epimerase (EC 5.1.3.2) low > 78
Castellaniella sp019104865 MT123 0.60 ABCV34_RS09045 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.39 ABCV34_RS10235 UDP-glucose 4-epimerase GalE low > 48
Escherichia fergusonii Becca 0.60 EFB2_03694 S-(hydroxymethyl)glutathione dehydrogenase 0.39 EFB2_03347 UDP-glucose 4-epimerase low > 86
Escherichia coli BW25113 0.60 b0356 frmA alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) 0.39 b0759 galE UDP-galactose-4-epimerase (VIMSS) low > 76
Escherichia coli Nissle 1917 0.60 ECOLIN_RS02210 S-(hydroxymethyl)glutathione dehydrogenase 0.39 ECOLIN_RS04040 UDP-glucose 4-epimerase GalE low > 55
Escherichia coli ECRC101 0.60 MCAODC_27970 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.38 MCAODC_25935 galE UDP-glucose 4-epimerase GalE low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03314 S-(hydroxymethyl)glutathione dehydrogenase 0.39 OHPLBJKB_02954 UDP-glucose 4-epimerase low > 73
Escherichia coli ECOR38 0.60 HEPCGN_07365 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 HEPCGN_01560 galT galactose-1-phosphate uridylyltransferase low > 87
Escherichia coli ECRC100 0.60 OKFHMN_08740 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 OKFHMN_06715 galT galactose-1-phosphate uridylyltransferase low > 80
Escherichia coli ECOR27 0.60 NOLOHH_01650 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 NOLOHH_23145 galE UDP-glucose 4-epimerase GalE low > 75
Escherichia coli ECRC102 0.60 NIAGMN_06795 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 NIAGMN_04765 galT galactose-1-phosphate uridylyltransferase — —
Escherichia coli ECRC62 0.60 BNILDI_23065 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 BNILDI_14690 galE UDP-glucose 4-epimerase GalE low > 75
Escherichia coli ECRC98 0.60 JDDGAC_12395 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 JDDGAC_10370 galT galactose-1-phosphate uridylyltransferase low > 86
Escherichia coli ECRC99 0.60 KEDOAH_19230 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.39 KEDOAH_21250 galT galactose-1-phosphate uridylyltransferase — —

Not shown: 39 genomes with orthologs for CCNA_02601 only; 10 genomes with orthologs for CCNA_00090 only