Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Klebsiella michiganensis M5al | 1.0 | BWI76_RS05165 | | cobalamin-binding protein | 1.0 | BWI76_RS00890 | | vitamin B12/cobalamin outer membrane transporter | 0.39 | 3 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.76 | GFF63 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.53 | GFF2352 | | Outer membrane vitamin B12 receptor BtuB | 0.50 | 2 |
Escherichia coli ECRC98 | 0.74 | JDDGAC_13865 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | JDDGAC_17155 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 86 |
Escherichia coli ECRC99 | 0.74 | KEDOAH_17885 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | KEDOAH_14630 | btuB | TonB-dependent vitamin B12 receptor BtuB | — | — |
Escherichia coli ECRC102 | 0.74 | NIAGMN_08120 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | NIAGMN_11280 | btuB | TonB-dependent vitamin B12 receptor BtuB | — | — |
Escherichia coli ECRC62 | 0.74 | BNILDI_09055 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | BNILDI_05850 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Escherichia coli BW25113 | 0.74 | b0158 | btuF | vitamin B12-transporter protein BtuF (NCBI) | 0.52 | b3966 | btuB | vitamin B12/cobalamin outer membrane transporter (NCBI) | 0.33 | 1 |
Escherichia fergusonii Becca | 0.74 | EFB2_03886 | | Vitamin B12-binding protein | 0.68 | EFB2_04644 | | Vitamin B12 transporter BtuB | low | > 86 |
Escherichia coli ECRC100 | 0.74 | OKFHMN_10270 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | OKFHMN_13530 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 80 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.74 | OHPLBJKB_03504 | | Vitamin B12-binding protein | 0.52 | OHPLBJKB_04084 | | Vitamin B12 transporter BtuB | 0.37 | 22 |
Escherichia coli ECRC101 | 0.74 | MCAODC_00785 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | MCAODC_04030 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 87 |
Escherichia coli ECOR27 | 0.74 | NOLOHH_02615 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | NOLOHH_05675 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Enterobacter sp. TBS_079 | 0.74 | MPMX20_00844 | | Vitamin B12-binding protein | 0.53 | MPMX20_04514 | | Vitamin B12 transporter BtuB | 0.48 | 1 |
Escherichia coli ECOR38 | 0.74 | HEPCGN_08220 | btuF | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | HEPCGN_12185 | btuB | TonB-dependent vitamin B12 receptor BtuB | low | > 87 |
Escherichia coli Nissle 1917 | 0.74 | ECOLIN_RS00880 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | ECOLIN_RS22905 | | TonB-dependent vitamin B12 receptor BtuB | — | — |
Enterobacter asburiae PDN3 | 0.70 | EX28DRAFT_3747 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.51 | EX28DRAFT_4429 | | TonB-dependent vitamin B12 receptor | 0.67 | 43 |
Serratia liquefaciens MT49 | 0.56 | IAI46_03570 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | IAI46_24450 | | TonB-dependent vitamin B12 receptor BtuB | low | > 86 |
Rahnella sp. WP5 | 0.52 | EX31_RS03185 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.53 | EX31_RS14135 | | TonB-dependent vitamin B12 receptor BtuB | 0.87 | 1 |
Dickeya dadantii 3937 | 0.51 | DDA3937_RS15875 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.50 | DDA3937_RS00995 | | TonB-dependent vitamin B12 receptor BtuB | low | > 74 |
Pantoea sp. MT58 | 0.50 | IAI47_15575 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.50 | IAI47_00955 | | TonB-dependent vitamin B12 receptor BtuB | 0.54 | 7 |
Dickeya dianthicola 67-19 | 0.50 | HGI48_RS16015 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.49 | HGI48_RS20380 | | TonB-dependent vitamin B12 receptor BtuB | low | > 71 |
Dickeya dianthicola ME23 | 0.50 | DZA65_RS17100 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.63 | DZA65_RS21425 | | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS05645 | | vitamin B12 ABC transporter substrate-binding protein BtuF | 0.52 | HER17_RS00980 | | TonB-dependent vitamin B12 receptor BtuB | low | > 75 |
Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_12055 | | cobalamin-binding protein | 0.28 | CSW01_00790 | | vitamin B12 transporter BtuB | low | > 62 |
Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS04880 | | cobalamin-binding protein | 0.14 | BPHYT_RS04850 | | TonB-denpendent receptor | low | > 109 |
Paraburkholderia bryophila 376MFSha3.1 | 0.30 | H281DRAFT_00142 | | iron complex transport system substrate-binding protein | 0.15 | H281DRAFT_00136 | | vitamin B12 transporter | low | > 103 |
Paraburkholderia graminis OAS925 | 0.30 | ABIE53_001251 | | iron complex transport system substrate-binding protein | 0.15 | ABIE53_001246 | | vitamin B12 transporter | 0.51 | 1 |
Paraburkholderia sabiae LMG 24235 | 0.30 | QEN71_RS25115 | | cobalamin-binding protein | 0.14 | QEN71_RS25145 | | TonB-dependent receptor | low | > 153 |
Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS00060 | | cobalamin-binding protein | 0.14 | ABZR87_RS00095 | | TonB-dependent receptor | 0.59 | 3 |
Ralstonia solanacearum IBSBF1503 | 0.30 | RALBFv3_RS04465 | | cobalamin-binding protein | 0.14 | RALBFv3_RS04495 | | TonB-dependent receptor | low | > 76 |
Ralstonia solanacearum UW163 | 0.30 | UW163_RS09205 | | cobalamin-binding protein | 0.14 | UW163_RS09175 | | TonB-dependent receptor | — | — |
Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS12905 | | cobalamin-binding protein | 0.13 | RPSI07_RS12875 | | TonB-dependent receptor | low | > 81 |
Ralstonia solanacearum GMI1000 | 0.29 | RS_RS12020 | | cobalamin-binding protein | 0.13 | RS_RS12050 | | TonB-dependent receptor | low | > 80 |
Marinobacter adhaerens HP15 | 0.28 | HP15_3954 | | substrate-binding periplasmic (PBP) ABC transporter protein | 0.16 | HP15_3953 | | outer membrane receptor for transport of vitamin B | 0.29 | 4 |
Cupriavidus basilensis FW507-4G11 | 0.27 | RR42_RS16095 | | cobalamin-binding protein | 0.14 | RR42_RS16140 | | TonB-dependent receptor | 0.31 | 25 |
Pseudomonas simiae WCS417 | 0.24 | PS417_25220 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.15 | PS417_25210 | | TonB-dependent receptor | low | > 88 |
Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS26855 | | cobalamin-binding protein | 0.15 | PFLU_RS26850 | | TonB-dependent receptor | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS26855 | | cobalamin-binding protein | 0.15 | PFLU_RS26850 | | TonB-dependent receptor | low | > 109 |
Pseudomonas fluorescens FW300-N2C3 | 0.22 | AO356_14980 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.15 | AO356_14985 | | TonB-dependent receptor | low | > 104 |
Pseudomonas fluorescens FW300-N2E2 | 0.21 | Pf6N2E2_4929 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.16 | Pf6N2E2_4930 | | Outer membrane vitamin B12 receptor BtuB | low | > 103 |
Pseudomonas fluorescens FW300-N2E3 | 0.20 | AO353_06665 | | iron-hydroxamate ABC transporter substrate-binding protein | 0.15 | AO353_06660 | | TonB-dependent receptor | low | > 101 |
Pseudomonas sp. S08-1 | 0.19 | OH686_15750 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.16 | OH686_15755 | | Outer membrane vitamin B12 receptor BtuB | low | > 80 |
Pseudomonas sp. RS175 | 0.19 | PFR28_03939 | | Vitamin B12-binding protein | 0.16 | PFR28_03938 | | Vitamin B12 transporter BtuB | low | > 88 |
Pseudomonas fluorescens FW300-N1B4 | 0.19 | Pf1N1B4_2659 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.16 | Pf1N1B4_2660 | | Outer membrane vitamin B12 receptor BtuB | 0.30 | 28 |
Pseudomonas stutzeri RCH2 | 0.19 | Psest_3542 | | ABC-type Fe3+-hydroxamate transport system, periplasmic component | 0.18 | Psest_3016 | | TonB-dependent vitamin B12 receptor | low | > 67 |
Pseudomonas fluorescens GW456-L13 | 0.18 | PfGW456L13_1323 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.16 | PfGW456L13_1324 | | Outer membrane vitamin B12 receptor BtuB | low | > 87 |
Pseudomonas putida KT2440 | 0.16 | PP_0524 | | putative Periplasmic cobalamin-binding protein HutB | 0.16 | PP_0525 | | TonB-dependent receptor, B12 family | low | > 96 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.15 | GFF3984 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.18 | GFF3976 | | Outer membrane vitamin B12 receptor BtuB | — | — |
Variovorax sp. SCN45 | 0.14 | GFF447 | | Vitamin B12 ABC transporter, substrate-binding protein BtuF | 0.17 | GFF450 | | Outer membrane vitamin B12 receptor BtuB | low | > 127 |
Variovorax sp. OAS795 | 0.13 | ABID97_RS17410 | | helical backbone metal receptor | 0.18 | ABID97_RS17425 | | TonB-dependent receptor | 0.91 | 2 |
Acidovorax sp. GW101-3H11 | 0.11 | Ac3H11_988 | | Vitamin B12 ABC transporter, B12-binding component BtuF | 0.16 | Ac3H11_985 | | Outer membrane vitamin B12 receptor BtuB | 0.68 | 1 |
Not shown: 8 genomes with orthologs for BWI76_RS05165 only; 15 genomes with orthologs for BWI76_RS00890 only