| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS28825 | | methylmalonate-semialdehyde dehydrogenase | 1.0 | BPHYT_RS33580 | | geranyltranstransferase | 0.23 | 20 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.95 | H281DRAFT_03264 | | methylmalonate-semialdehyde dehydrogenase [acylating] | 0.96 | H281DRAFT_06016 | | farnesyl-diphosphate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.94 | ABIE53_005233 | | malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | 0.95 | ABIE53_004858 | | farnesyl diphosphate synthase | low | > 113 |
| Cupriavidus basilensis FW507-4G11 | 0.78 | RR42_RS01580 | | methylmalonate-semialdehyde dehydrogenase | 0.57 | RR42_RS15010 | | geranyl transferase | — | — |
| Ralstonia solanacearum GMI1000 | 0.75 | RS_RS22225 | | methylmalonate-semialdehyde dehydrogenase (CoA acylating) | 0.52 | RS_RS11155 | | polyprenyl synthetase family protein | — | — |
| Ralstonia solanacearum PSI07 | 0.75 | RPSI07_RS04870 | | methylmalonate-semialdehyde dehydrogenase (CoA acylating) | 0.54 | RPSI07_RS13520 | | polyprenyl synthetase family protein | — | — |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS24005 | | methylmalonate-semialdehyde dehydrogenase | 0.62 | HSERO_RS19130 | | geranyl transferase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.73 | Pf1N1B4_4277 | | Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) | 0.42 | Pf1N1B4_2662 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_21350 | | methylmalonate-semialdehyde dehydrogenase | 0.42 | AO353_06650 | | geranyl transferase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.72 | AO356_23175 | | malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) | 0.40 | AO356_14995 | | geranyl transferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_515 | | malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) | 0.41 | Pf6N2E2_4933 | | Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | — | — |
| Variovorax sp. OAS795 | 0.70 | ABID97_RS19485 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.45 | ABID97_RS09275 | | polyprenyl synthetase family protein | low | > 91 |
| Pseudomonas syringae pv. syringae B728a | 0.70 | Psyr_3271 | | methylmalonate-semialdehyde dehydrogenase (acylating) | 0.41 | Psyr_0605 | | farnesyl-diphosphate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.70 | Psyr_3271 | | methylmalonate-semialdehyde dehydrogenase (acylating) | 0.41 | Psyr_0605 | | farnesyl-diphosphate synthase | — | — |
| Variovorax sp. SCN45 | 0.70 | GFF5041 | | Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18) | 0.47 | GFF6129 | | (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) | 0.91 | 34 |
| Marinobacter adhaerens HP15 | 0.69 | HP15_2655 | | methylmalonate-semialdehyde dehydrogenase | 0.44 | HP15_581 | | geranyltranstransferase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.68 | GFF1895 | | Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) | 0.41 | GFF5576 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | — | — |
| Azospirillum sp. SherDot2 | 0.65 | MPMX19_04040 | | Putative 3-oxopropanoate dehydrogenase | 0.36 | MPMX19_05065 | | Farnesyl diphosphate synthase | low | > 112 |
| Shewanella loihica PV-4 | 0.65 | Shew_0965 | | methylmalonate-semialdehyde dehydrogenase (RefSeq) | 0.42 | Shew_2770 | | polyprenyl synthetase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.65 | Sama_2650 | | methylmalonate-semialdehyde dehydrogenase (RefSeq) | 0.40 | Sama_2435 | | geranyltranstransferase (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_3107 | | methylmalonate-semialdehyde dehydrogenase [acylating] (RefSeq) | 0.37 | Shewana3_2900 | | farnesyl-diphosphate synthase (RefSeq) | — | — |
| Pseudomonas simiae WCS417 | 0.64 | PS417_10925 | | malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) | 0.38 | PS417_25200 | | geranyl transferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.64 | PFLU_RS11260 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.38 | PFLU_RS26840 | | hypothetical protein | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.64 | PFLU_RS11260 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.38 | PFLU_RS26840 | | hypothetical protein | — | — |
| Rhizobium sp. OAE497 | 0.59 | ABIE40_RS03335 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.29 | ABIE40_RS18720 | | polyprenyl synthetase family protein | low | > 107 |
| Agrobacterium fabrum C58 | 0.58 | Atu0205 | | methylmalonate-semialdehyde dehydrogenase | 0.30 | Atu2721 | | geranyltranstransferase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF888 | | Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) | 0.39 | GFF4325 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) | — | — |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_03462 | | Methylmalonate-semialdehyde dehydrogenase [acylating] | 0.33 | MIT1002_02692 | | Farnesyl diphosphate synthase | — | — |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_03375 | | Putative 3-oxopropanoate dehydrogenase | 0.40 | MPMX20_01012 | | Farnesyl diphosphate synthase | — | — |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_0147 | | methylmalonic acid semialdehyde dehydrogenase | 0.39 | EX28DRAFT_2550 | | Geranylgeranyl pyrophosphate synthase | — | — |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS03855 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.37 | DZA65_RS05920 | | (2E,6E)-farnesyl diphosphate synthase | — | — |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS03730 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.37 | HGI48_RS05595 | | (2E,6E)-farnesyl diphosphate synthase | — | — |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS03670 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.37 | DDA3937_RS05535 | | (2E,6E)-farnesyl diphosphate synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.56 | SMc00781 | | malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) | 0.30 | SMc03884 | | geranyltranstransferase | — | — |
| Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_4340 | | Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) | 0.45 | Ac3H11_3565 | | Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) | — | — |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS14440 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.40 | HER17_RS15930 | | (2E,6E)-farnesyl diphosphate synthase | — | — |
| Pantoea sp. MT58 | 0.55 | IAI47_01465 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.41 | IAI47_14735 | | (2E,6E)-farnesyl diphosphate synthase | — | — |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS03070 | | Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) (from data) | 0.40 | BWI76_RS06385 | | (2E,6E)-farnesyl diphosphate synthase | — | — |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS02350 | | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 0.48 | LU632_RS23555 | | polyprenyl synthetase family protein | low | > 74 |
Not shown: 0 genomes with orthologs for BPHYT_RS28825 only; 53 genomes with orthologs for BPHYT_RS33580 only