Conservation of cofitness between BPHYT_RS13075 and BPHYT_RS14840 in Burkholderia phytofirmans PsJN

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13075 hypothetical protein 1.0 BPHYT_RS14840 lytic transglycosylase 0.33 6
Paraburkholderia bryophila 376MFSha3.1 0.89 H281DRAFT_00430 hypothetical protein 0.92 H281DRAFT_03910 membrane-bound lytic murein transglycosylase B low > 103
Paraburkholderia graminis OAS925 0.87 ABIE53_002826 putative metal-dependent hydrolase 0.89 ABIE53_003143 membrane-bound lytic murein transglycosylase B low > 113
Pseudomonas simiae WCS417 0.71 PS417_26400 metal-dependent hydrolase 0.29 PS417_24715 lytic transglycosylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS28050 M48 family metallopeptidase 0.29 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS28050 M48 family metallopeptidase 0.29 PFLU_RS26645 lytic murein transglycosylase B low > 109
Pseudomonas sp. S08-1 0.70 OH686_10720 UTP pyrophosphatase 0.29 OH686_09310 lytic murein transglycosylase B low > 80
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_07880 metal-dependent hydrolase 0.30 AO353_06465 lytic transglycosylase low > 101
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1072 COG1451: Predicted metal-dependent hydrolase 0.29 PfGW456L13_1362 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_13730 metal-dependent hydrolase 0.31 AO356_15320 lytic transglycosylase low > 104
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4667 COG1451: Predicted metal-dependent hydrolase 0.30 Pf6N2E2_4999 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2406 COG1451: Predicted metal-dependent hydrolase 0.29 Pf1N1B4_2694 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 87
Pseudomonas sp. RS175 0.68 PFR28_04178 UTP pyrophosphatase 0.31 PFR28_03866 Membrane-bound lytic murein transglycosylase B low > 88
Pseudomonas putida KT2440 0.68 PP_4958 putative metal-dependent hydrolase 0.29 PP_4805 membrane-bound lytic murein transglycosylase B low > 96
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS18615 metal-dependent hydrolase 0.52 RR42_RS04540 lytic transglycosylase 0.28 70
Pseudomonas stutzeri RCH2 0.65 Psest_4311 Predicted metal-dependent hydrolase 0.30 Psest_0514 lytic murein transglycosylase B low > 67
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_0510 conserved hypothetical protein 0.29 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_0510 conserved hypothetical protein 0.29 Psyr_4363 membrane-bound lytic murein transglycosylase B low > 86
Escherichia coli BW25113 0.61 b3085 ygjP orf, hypothetical protein (VIMSS) 0.26 b2701 mltB membrane-bound lytic murein transglycosylase B (NCBI) low > 76
Rahnella sp. WP5 0.60 EX31_RS08355 M48 family metallopeptidase 0.25 EX31_RS07810 lytic murein transglycosylase B low > 89
Escherichia coli Nissle 1917 0.60 ECOLIN_RS17795 M48 family metallopeptidase 0.27 ECOLIN_RS27170 lytic murein transglycosylase B — —
Escherichia coli BL21 0.60 ECD_02954 putative metal dependent hydrolase 0.26 ECD_02551 membrane-bound lytic murein transglycosylase B low > 61
Escherichia fergusonii Becca 0.60 EFB2_00727 UTP pyrophosphatase 0.26 EFB2_01223 Membrane-bound lytic murein transglycosylase B low > 86
Serratia liquefaciens MT49 0.60 IAI46_22190 M48 family metallopeptidase 0.27 IAI46_18155 lytic murein transglycosylase B low > 86
Klebsiella michiganensis M5al 0.59 BWI76_RS24700 hypothetical protein 0.27 BWI76_RS22210 murein transglycosylase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3187 COG1451: Predicted metal-dependent hydrolase 0.26 GFF4695 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 78
Pantoea sp. MT58 0.58 IAI47_02945 M48 family metallopeptidase 0.26 IAI47_04275 lytic murein transglycosylase B low > 76
Variovorax sp. SCN45 0.58 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) 0.35 GFF2666 Membrane-bound lytic murein transglycosylase B low > 127
Variovorax sp. OAS795 0.58 ABID97_RS08395 M48 family metallopeptidase 0.33 ABID97_RS19915 lytic murein transglycosylase B low > 91
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.3643.1 COG1451: Predicted metal-dependent hydrolase 0.23 Xcc-8004.904.1 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3154 Predicted metal-dependent hydrolase 0.26 EX28DRAFT_2790 lytic murein transglycosylase B low > 76
Acidovorax sp. GW101-3H11 0.57 Ac3H11_939 COG1451: Predicted metal-dependent hydrolase 0.33 Ac3H11_3197 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) low > 79
Pectobacterium carotovorum WPP14 0.55 HER17_RS03620 M48 family metallopeptidase 0.25 HER17_RS16185 lytic murein transglycosylase B low > 75
Dechlorosoma suillum PS 0.54 Dsui_2947 putative metal-dependent hydrolase 0.29 Dsui_1972 lytic murein transglycosylase B low > 51
Shewanella sp. ANA-3 0.54 Shewana3_2608 hypothetical protein (RefSeq) 0.25 Shewana3_0993 lytic murein transglycosylase B (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO2840 conserved hypothetical protein (NCBI ptt file) 0.24 SO1166 membrane-bound lytic transglycosylase, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.49 Shew_2454 hypothetical protein (RefSeq) 0.24 Shew_2937 lytic murein transglycosylase B (RefSeq) — —

Not shown: 17 genomes with orthologs for BPHYT_RS13075 only; 15 genomes with orthologs for BPHYT_RS14840 only