Conservation of cofitness between BPHYT_RS09440 and BPHYT_RS12990 in Burkholderia phytofirmans PsJN

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS09440 glycerate kinase 1.0 BPHYT_RS12990 iron transporter 0.28 16
Paraburkholderia graminis OAS925 0.86 ABIE53_002112 glycerate kinase 0.98 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX low > 113
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_00894 glycerate kinase 0.98 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX — —
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS21995 glycerate kinase 0.92 QEN71_RS05615 oxidative damage protection protein low > 153
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS10055 glycerate kinase 0.79 HSERO_RS17325 iron transporter — —
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS23230 glycerate kinase 0.84 RR42_RS13040 iron transporter low > 128
Pseudomonas fluorescens SBW25 0.37 PFLU_RS14645 glycerate kinase 0.48 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS14645 glycerate kinase 0.48 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_26900 glycerate kinase 0.45 AO353_12045 iron transporter low > 101
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_4998 Glycerate kinase (EC 2.7.1.31) 0.45 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX — —
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_2941 Glycerate kinase (EC 2.7.1.31) 0.46 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 87
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_22870 glycerate kinase 0.48 AO356_09835 iron transporter low > 104
Pseudomonas simiae WCS417 0.35 PS417_13970 glycerate kinase 0.49 PS417_01540 iron transporter — —
Pseudomonas sp. S08-1 0.35 OH686_04780 Glycerate kinase 0.50 OH686_14545 Probable Fe(2+)-trafficking protein YggX low > 80
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_3115 Glycerate kinase 0.44 Psyr_4902 Protein of unknown function DUF495 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_3115 Glycerate kinase 0.44 Psyr_4902 Protein of unknown function DUF495 low > 86
Pseudomonas sp. RS175 0.35 PFR28_02469 Glycerate 2-kinase 0.47 PFR28_04924 putative Fe(2+)-trafficking protein low > 88
Pseudomonas putida KT2440 0.34 PP_3178 glycerate kinase 0.49 PP_0285 Fe(2+)-trafficking protein — —
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_460 Glycerate kinase (EC 2.7.1.31) 0.49 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 103
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5387.1 Glycerate kinase (EC 2.7.1.31) 0.52 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX — —
Serratia liquefaciens MT49 0.29 IAI46_05265 glycerate kinase 0.49 IAI46_21470 oxidative damage protection protein low > 86
Shewanella loihica PV-4 0.29 Shew_2534 glycerate kinase (RefSeq) 0.47 Shew_1122 hypothetical protein (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4430 Glycerate kinase (EC 2.7.1.31) 0.45 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 78
Pectobacterium carotovorum WPP14 0.28 HER17_RS04100 glycerate kinase 0.46 HER17_RS16630 oxidative damage protection protein low > 75
Shewanella sp. ANA-3 0.28 Shewana3_2685 glycerate kinase (RefSeq) 0.50 Shewana3_1180 hypothetical protein (RefSeq) 0.62 21
Acinetobacter radioresistens SK82 0.28 MPMX26_00368 Glycerate 2-kinase 0.47 MPMX26_00184 putative Fe(2+)-trafficking protein — —
Klebsiella michiganensis M5al 0.28 BWI76_RS22820 glycerate kinase 0.47 BWI76_RS24160 Fe(2+)-trafficking protein — —
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_18660 glycerate kinase 0.51 CSW01_02405 Fe(2+)-trafficking protein — —
Escherichia coli ECOR38 0.28 HEPCGN_06530 glxK glycerate 3-kinase 0.45 HEPCGN_18465 yggX oxidative damage protection protein low > 87
Escherichia coli ECRC62 0.27 BNILDI_22305 glxK glycerate 3-kinase 0.45 BNILDI_09640 yggX oxidative damage protection protein low > 75
Enterobacter sp. TBS_079 0.27 MPMX20_03656 Glycerate 2-kinase 0.48 MPMX20_03819 putative Fe(2+)-trafficking protein low > 85
Escherichia coli ECRC101 0.27 MCAODC_27105 glxK glycerate 3-kinase 0.45 MCAODC_09715 yggX oxidative damage protection protein low > 87
Escherichia coli ECRC100 0.27 OKFHMN_07885 glxK glycerate 3-kinase 0.45 OKFHMN_19195 yggX oxidative damage protection protein low > 80
Escherichia coli ECRC98 0.27 JDDGAC_11535 glxK glycerate 3-kinase 0.45 JDDGAC_22825 yggX oxidative damage protection protein low > 86
Escherichia coli ECRC102 0.27 NIAGMN_05940 glxK glycerate 3-kinase 0.45 NIAGMN_16960 yggX oxidative damage protection protein — —
Escherichia coli ECRC99 0.27 KEDOAH_20080 glxK glycerate 3-kinase 0.45 KEDOAH_08945 yggX oxidative damage protection protein — —
Escherichia coli Nissle 1917 0.27 ECOLIN_RS02985 glycerate 3-kinase 0.45 ECOLIN_RS16475 oxidative damage protection protein low > 55
Shewanella oneidensis MR-1 0.27 SO1770 glycerate kinase, putative (NCBI ptt file) 0.51 SO3369 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli ECOR27 0.27 NOLOHH_00875 glxK glycerate 3-kinase 0.45 NOLOHH_11055 yggX oxidative damage protection protein low > 75
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2867 glycerate kinase 0.47 EX28DRAFT_2999 Fe-S cluster protector protein low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03167 Glycerate 3-kinase 0.45 OHPLBJKB_00754 putative Fe(2+)-trafficking protein low > 73
Escherichia coli BL21 0.27 ECD_00464 glycerate kinase II 0.45 ECD_02792 oxidative damage protective factor for iron-sulfur proteins low > 61
Rahnella sp. WP5 0.27 EX31_RS07975 glycerate kinase 0.48 EX31_RS02740 oxidative damage protection protein low > 89
Escherichia coli BW25113 0.26 b0514 glxK glycerate kinase II (NCBI) 0.45 b2962 yggX hypothetical protein (NCBI) low > 76
Dickeya dianthicola 67-19 0.26 HGI48_RS17085 glycerate kinase 0.47 HGI48_RS04905 oxidative damage protection protein — —
Dickeya dianthicola ME23 0.26 DZA65_RS18160 glycerate kinase 0.47 DZA65_RS05240 oxidative damage protection protein low > 75
Erwinia tracheiphila SCR3 0.26 LU632_RS06335 glycerate kinase 0.48 LU632_RS05415 oxidative damage protection protein low > 74
Escherichia fergusonii Becca 0.26 EFB2_03548 Glycerate 3-kinase 0.45 EFB2_00940 putative Fe(2+)-trafficking protein low > 86
Dickeya dadantii 3937 0.26 DDA3937_RS17030 glycerate kinase 0.48 DDA3937_RS04895 oxidative damage protection protein — —
Shewanella amazonensis SB2B 0.26 Sama_3228 glycerate kinase (RefSeq) 0.55 Sama_2491 hypothetical protein (RefSeq) low > 62

Not shown: 9 genomes with orthologs for BPHYT_RS09440 only; 21 genomes with orthologs for BPHYT_RS12990 only