Conservation of cofitness between BPHYT_RS19670 and BPHYT_RS09030 in Burkholderia phytofirmans PsJN

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS19670 DSBA oxidoreductase 1.0 BPHYT_RS09030 membrane protein 0.32 12
Paraburkholderia graminis OAS925 0.94 ABIE53_000311 DHA2 family multidrug resistance protein 0.89 ABIE53_002041 Mlc titration factor MtfA (ptsG expression regulator) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.92 H281DRAFT_02341 MFS transporter, DHA2 family, multidrug resistance protein 0.91 H281DRAFT_00825 hypothetical protein low > 103
Enterobacter sp. TBS_079 0.54 MPMX20_03564 Multidrug export protein EmrB 0.24 MPMX20_02972 Protein MtfA low > 85
Dickeya dianthicola ME23 0.54 DZA65_RS17910 multidrug efflux MFS transporter permease subunit EmrB 0.21 DZA65_RS08885 DgsA anti-repressor MtfA low > 75
Dickeya dianthicola 67-19 0.54 HGI48_RS16835 multidrug efflux MFS transporter permease subunit EmrB 0.22 HGI48_RS08595 DgsA anti-repressor MtfA low > 71
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2769 drug resistance transporter, EmrB/QacA subfamily 0.24 EX28DRAFT_0578 Uncharacterized protein conserved in bacteria low > 76
Pantoea sp. MT58 0.54 IAI47_04495 multidrug efflux MFS transporter permease subunit EmrB 0.21 IAI47_07890 DgsA anti-repressor MtfA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF1593 Multidrug resistance protein B 0.25 GFF3986 FIG01220476: hypothetical protein low > 78
Klebsiella michiganensis M5al 0.53 BWI76_RS22100 multidrug effux MFS transporter subunit EmrB 0.25 BWI76_RS18460 DgsA anti-repressor MtfA low > 92
Dickeya dadantii 3937 0.52 DDA3937_RS16765 multidrug efflux MFS transporter permease subunit EmrB 0.21 DDA3937_RS08430 DgsA anti-repressor MtfA low > 74
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS16115 DHA2 family efflux MFS transporter permease subunit 0.28 LRK54_RS05975 zinc-dependent peptidase low > 59
Rhodanobacter denitrificans MT42 0.52 LRK55_RS15865 DHA2 family efflux MFS transporter permease subunit 0.28 LRK55_RS05730 zinc-dependent peptidase low > 63
Escherichia coli Nissle 1917 0.52 ECOLIN_RS14970 multidrug efflux MFS transporter permease subunit EmrB 0.24 ECOLIN_RS11350 DgsA anti-repressor MtfA — —
Escherichia fergusonii Becca 0.52 EFB2_01242 Multidrug export protein EmrB 0.24 EFB2_01949 Protein MtfA low > 86
Escherichia coli BW25113 0.51 b2686 emrB multidrug efflux system protein (NCBI) 0.24 b1976 b1976 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECOR27 0.51 NOLOHH_12615 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 NOLOHH_16160 mtfA DgsA anti-repressor MtfA low > 75
Escherichia coli ECRC101 0.51 MCAODC_11300 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 MCAODC_20180 mtfA DgsA anti-repressor MtfA low > 87
Escherichia coli ECRC100 0.51 OKFHMN_20775 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 OKFHMN_25210 mtfA DgsA anti-repressor MtfA — —
Escherichia coli ECRC98 0.51 JDDGAC_24440 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 JDDGAC_29340 mtfA DgsA anti-repressor MtfA low > 86
Escherichia coli ECOR38 0.51 HEPCGN_19970 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 HEPCGN_03610 mtfA DgsA anti-repressor MtfA low > 87
Escherichia coli BL21 0.51 ECD_02541 multidrug efflux system protein 0.24 ECD_01890 anti-repressor for DgsA(Mlc) — —
Escherichia coli ECRC62 0.51 BNILDI_11175 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 BNILDI_14950 mtfA DgsA anti-repressor MtfA low > 75
Escherichia coli ECRC99 0.51 KEDOAH_07360 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 KEDOAH_02885 mtfA DgsA anti-repressor MtfA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_01047 Multidrug export protein EmrB 0.24 OHPLBJKB_01733 Protein MtfA low > 73
Escherichia coli ECRC102 0.51 NIAGMN_18545 emrB multidrug efflux MFS transporter permease subunit EmrB 0.24 NIAGMN_22715 mtfA DgsA anti-repressor MtfA — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS04460 multidrug efflux MFS transporter permease subunit EmrB 0.28 HER17_RS13575 DgsA anti-repressor MtfA low > 75
Rahnella sp. WP5 0.51 EX31_RS13660 multidrug efflux MFS transporter permease subunit EmrB 0.23 EX31_RS11010 DgsA anti-repressor MtfA low > 89
Serratia liquefaciens MT49 0.50 IAI46_20005 multidrug efflux MFS transporter permease subunit EmrB 0.24 IAI46_16625 DgsA anti-repressor MtfA low > 86
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_08535 emrB MFS transporter 0.35 OKGIIK_04150 Glucose-regulated metallo-peptidase M90 low > 52
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS06395 DHA2 family efflux MFS transporter permease subunit 0.29 ABZR86_RS18370 M90 family metallopeptidase low > 74
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit 0.33 PFLU_RS26775 zinc-dependent peptidase low > 109
Pseudomonas fluorescens SBW25 0.48 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit 0.33 PFLU_RS26775 zinc-dependent peptidase low > 109
Pseudomonas simiae WCS417 0.48 PS417_16910 multidrug resistance protein B 0.34 PS417_24840 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_27840 multidrug resistance protein B 0.33 AO353_06590 zinc-dependent peptidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_4002 Inner membrane component of tripartite multidrug resistance system 0.33 Pf1N1B4_2667 Inner membrane protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_01025 multidrug resistance protein B 0.32 AO356_15195 zinc-dependent peptidase low > 104
Pseudomonas putida KT2440 0.47 PP_3548 multidrug efflux transport system - permease subunit 0.33 PP_0539 glucose-regulated peptidase low > 96
Pseudomonas sp. RS175 0.47 PFR28_02747 Multidrug export protein EmrB 0.31 PFR28_03892 Protein MtfA low > 88
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_2606 Inner membrane component of tripartite multidrug resistance system 0.33 PfGW456L13_1336 Inner membrane protein 0.27 56
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily 0.32 Psyr_0625 Protein of unknown function DUF980 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily 0.32 Psyr_0625 Protein of unknown function DUF980 low > 86
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_149 Inner membrane component of tripartite multidrug resistance system 0.32 Pf6N2E2_4973 Inner membrane protein low > 103
Lysobacter sp. OAE881 0.45 ABIE51_RS07705 DHA2 family efflux MFS transporter permease subunit 0.27 ABIE51_RS03950 M90 family metallopeptidase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.3524.1 Inner membrane component of tripartite multidrug resistance system 0.31 Xcc-8004.5004.1 Inner membrane protein low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS21345 MFS transporter 0.12 CA265_RS22430 peptidase low > 88
Dechlorosoma suillum PS 0.15 Dsui_1523 drug resistance transporter, EmrB/QacA subfamily 0.45 Dsui_2818 hypothetical protein low > 51

Not shown: 6 genomes with orthologs for BPHYT_RS19670 only; 19 genomes with orthologs for BPHYT_RS09030 only